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{{UBERON
{{UBERON
|id=UBERON:0002702
|alt_id=UBERON:NIF_GrossAnatomy_birnlex_1451-FMA_61859
|name=middle frontal gyrus
|namespace=
|def="The middle frontal gyrus makes up about one-third of the frontal lobe of the human brain. (A gyrus is one of the prominent 'bumps' or 'ridges' on the surface of the human brain. ) The middle frontal gyrus, like the inferior frontal gyrus and the superior frontal gyrus, is more of a region than a true gyrus. The borders of the middle frontal gyrus are the inferior frontal sulcus below; the superior frontal sulcus above; and the precentral sulcus behind. [WP,unvetted]." [Wikipedia:Middle_frontal_gyrus]
|xref=BTO:0004834;;FMA:61859;;http://upload.wikimedia.org/wikipedia/commons/7/7f/Middle_frontal_gyrus.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/7f/Middle_frontal_gyrus.png/200px-Middle_frontal_gyrus.png;;ncithesaurus:Middle_Frontal_Gyrus;;NIF_GrossAnatomy:birnlex_1451;;SCTID:362332009
|is_a=UBERON:0000200
|synonym="gyrus frontalis medialis" EXACT [FMA:61859, FMA:TA];;"gyrus frontalis medius" RELATED LATIN [Wikipedia:Middle_frontal_gyrus];;"intermediate frontal gyrus" EXACT [FMA:61859];;"medial frontal gyrus" EXACT [FMA:61859]
|comment=
|comment=
|alt_id=UBERON:NIF_GrossAnatomy_birnlex_1451-FMA_61859
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The middle frontal gyrus makes up about one-third of the frontal lobe of the human brain. (A gyrus is one of the prominent 'bumps' or 'ridges' on the surface of the human brain. ) The middle frontal gyrus, like the inferior frontal gyrus and the superior frontal gyrus, is more of a region than a true gyrus. The borders of the middle frontal gyrus are the inferior frontal sulcus below; the superior frontal sulcus above; and the precentral sulcus behind. [WP,unvetted]." [Wikipedia:Middle_frontal_gyrus]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002702
|is_a=UBERON:0015593
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=middle frontal gyrus
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001870
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="gyrus frontalis medialis" EXACT [FMA:61859, FMA:TA];;"gyrus frontalis medius" RELATED LATIN [Wikipedia:Middle_frontal_gyrus];;"intermediate frontal gyrus" EXACT [FMA:61859];;"medial frontal gyrus" EXACT [FMA:61859]
|union_of=
|xref=BTO:0004834;;FMA:61859;;http://upload.wikimedia.org/wikipedia/commons/7/7f/Middle_frontal_gyrus.png;;http://upload.wikimedia.org/wikipedia/commons/thumb/7/7f/Middle_frontal_gyrus.png/200px-Middle_frontal_gyrus.png;;ncithesaurus:Middle_Frontal_Gyrus;;NIF_GrossAnatomy:birnlex_1451;;SCTID:362332009
}}
}}

Latest revision as of 17:34, 12 September 2014

Name:middle frontal gyrus
Namespace:FANTOM
Definition:"The middle frontal gyrus makes up about one-third of the frontal lobe of the human brain. (A gyrus is one of the prominent 'bumps' or 'ridges' on the surface of the human brain. ) The middle frontal gyrus, like the inferior frontal gyrus and the superior frontal gyrus, is more of a region than a true gyrus. The borders of the middle frontal gyrus are the inferior frontal sulcus below; the superior frontal sulcus above; and the precentral sulcus behind. [WP,unvetted]." [Wikipedia:Middle_frontal_gyrus]
Xrefs:
links:

BTO:0004834
FMA:61859
[ Middle_frontal_gyrus.png Middle_frontal_gyrus.png]
[ 200px-Middle_frontal_gyrus.png 200px-Middle_frontal_gyrus.png]
ncithesaurus:Middle_Frontal_Gyrus
NIF_GrossAnatomy:birnlex_1451

SCTID:362332009
Synonyms: "gyrus frontalis medialis" EXACT [FMA:61859, FMA:TA]
"gyrus frontalis medius" RELATED LATIN [Wikipedia:Middle_frontal_gyrus]
"intermediate frontal gyrus" EXACT [FMA:61859]
"medial frontal gyrus" EXACT [FMA:61859]
Alt_id: UBERON:NIF_GrossAnatomy_birnlex_1451-FMA_61859
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0015593(frontal gyrus)
part_of:UBERON:0001870(frontal cortex)



Children

is a:FF:10150-102I6 (medial frontal gyrus, adult, donor10252),FF:10170-103B8 (medial frontal gyrus - adult, donor10196),FF:10352-105E1 (medial frontal gyrus, newborn, donor10223),FF:10368-105F8 (medial frontal gyrus, adult, donor10258)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002702 (middle frontal gyrus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.75e-130FFCP PHASE2:Hg19::chr5:160720498..160720507,-#_9385e4162cb8925aa441e524d35d47fbp@chr5:160720498..160720507, -
1.75e-130FFCP PHASE1:Hg19::chr5:160720498..160720507,-#_9385e4162cb8925aa441e524d35d47fbp@chr5:160720498..160720507, -
1.55e-98FFCP PHASE2:Hg19::chr6:133275544..133275556,+#_f16a4099b2f4c5e359b668fd83a6c5e2p@chr6:133275544..133275556, +
1.55e-98FFCP PHASE1:Hg19::chr6:133275544..133275556,+#_f16a4099b2f4c5e359b668fd83a6c5e2p@chr6:133275544..133275556, +
2.56e-98FFCP PHASE1:Hg19::chr8:24773140..24773144,+#_f917bfbfac0f375f49d2cdbb45c240d3p20@NEFM
2.56e-98FFCP PHASE2:Hg19::chr8:24773140..24773144,+#_f917bfbfac0f375f49d2cdbb45c240d3p20@NEFM
3.49e-79FFCP PHASE2:Hg19::chr4:176828307..176828316,-#_413fda82d5adebfbb831c6291ace3968p35@GPM6A
3.49e-79FFCP PHASE2:Hg19::chr2:17830681..17830687,+#_413fda82d5adebfbb831c6291ace3968p@chr2:17830681..17830687, +
3.49e-79FFCP PHASE1:Hg19::chr4:176828307..176828316,-#_413fda82d5adebfbb831c6291ace3968p35@GPM6A
3.49e-79FFCP PHASE1:Hg19::chr2:17830681..17830687,+#_413fda82d5adebfbb831c6291ace3968p@chr2:17830681..17830687, +
7.79e-79FFCP PHASE2:Hg19::chr6:133275530..133275540,+#_97ba06ef42727b0e5de23e437844d3e7p@chr6:133275530..133275540, +
7.79e-79FFCP PHASE1:Hg19::chr6:133275530..133275540,+#_97ba06ef42727b0e5de23e437844d3e7p@chr6:133275530..133275540, +
1.16e-78FFCP PHASE2:Hg19::chr13:99174373..99174384,-#_60a07b0c13664c2577adaed469998d41p20@STK24
1.16e-78FFCP PHASE1:Hg19::chr13:99174373..99174384,-#_60a07b0c13664c2577adaed469998d41p20@STK24
2.03e-66FFCP PHASE2:Hg19::chr5:143108438..143108440,-#_06ebdaf0b83275e7cf7e1e20d636c09ep@chr5:143108438..143108440, -
2.03e-66FFCP PHASE1:Hg19::chr5:143108438..143108440,-#_06ebdaf0b83275e7cf7e1e20d636c09ep@chr5:143108438..143108440, -
2.84e-66FFCP PHASE2:Hg19::chr10:64136269..64136280,+#_d273c7187368d92a76c56aba626597c8p8@ZNF365
2.84e-66FFCP PHASE1:Hg19::chr10:64136269..64136280,+#_d273c7187368d92a76c56aba626597c8p8@ZNF365
5.53e-66FFCP PHASE2:Hg19::chr2:86707340..86707351,+#_9ba1777391b8205ed4b4fd47bf0b6344p@chr2:86707340..86707351, +
5.53e-66FFCP PHASE2:Hg19::chr17:29623088..29623102,-#_9ba1777391b8205ed4b4fd47bf0b6344p6@OMG
5.53e-66FFCP PHASE1:Hg19::chr17:29623088..29623102,-#_9ba1777391b8205ed4b4fd47bf0b6344p6@OMG
5.53e-66FFCP PHASE1:Hg19::chr2:86707340..86707351,+#_9ba1777391b8205ed4b4fd47bf0b6344p@chr2:86707340..86707351, +
7.73e-66FFCP PHASE2:Hg19::chr1:36181014..36181023,-#_cf32e4348c2f61305aa0a2b66c4069cap@chr1:36181014..36181023, -
7.73e-66FFCP PHASE1:Hg19::chr1:36181014..36181023,-#_cf32e4348c2f61305aa0a2b66c4069cap@chr1:36181014..36181023, -
1.51e-57FFCP PHASE2:Hg19::chr20:1260281..1260284,+#_55583f1600eaf001cab8d87bd3a82cdep@chr20:1260281..1260284, +
1.51e-57FFCP PHASE1:Hg19::chr20:1260281..1260284,+#_55583f1600eaf001cab8d87bd3a82cdep@chr20:1260281..1260284, +
4.77e-57FFCP PHASE1:Hg19::chr12:79843478..79843487,+#_9f787f863e4abe40cc72816c1608d103p@chr12:79843478..79843487, +
4.77e-57FFCP PHASE2:Hg19::chr12:79843478..79843487,+#_9f787f863e4abe40cc72816c1608d103p@chr12:79843478..79843487, +
8.47e-57FFCP PHASE1:Hg19::chr2:44554050..44554063,-#_92769bfb79f09d72291bb92b71242794p@chr2:44554050..44554063, -
8.47e-57FFCP PHASE1:Hg19::chr17:1029026..1029035,-#_92769bfb79f09d72291bb92b71242794p37@ABR
8.47e-57FFCP PHASE2:Hg19::chr2:44554050..44554063,-#_92769bfb79f09d72291bb92b71242794p@chr2:44554050..44554063, -
8.47e-57FFCP PHASE1:Hg19::chr8:35828115..35828130,+#_92769bfb79f09d72291bb92b71242794p@chr8:35828115..35828130, +
8.47e-57FFCP PHASE2:Hg19::chr17:1029026..1029035,-#_92769bfb79f09d72291bb92b71242794p37@ABR
8.47e-57FFCP PHASE2:Hg19::chr8:35828115..35828130,+#_92769bfb79f09d72291bb92b71242794p@chr8:35828115..35828130, +
1.46e-50FFCP PHASE2:Hg19::chr11:133197324..133197336,-#_8e0fdfe92c545a11e0269b79487a95b1p@chr11:133197324..133197336, -
1.46e-50FFCP PHASE1:Hg19::chr11:133197324..133197336,-#_8e0fdfe92c545a11e0269b79487a95b1p@chr11:133197324..133197336, -
2.74e-50FFCP PHASE1:Hg19::chr15:91643336..91643337,+#_352fd5984f22a6f260df5f49b3c30482p19@SV2B
2.74e-50FFCP PHASE2:Hg19::chr8:27606125..27606134,-#_352fd5984f22a6f260df5f49b3c30482p6@CCDC25
2.74e-50FFCP PHASE2:Hg19::chrX:134232704..134232705,-#_352fd5984f22a6f260df5f49b3c30482p4@LINC00087
2.74e-50FFCP PHASE2:Hg19::chr4:146071958..146071961,-#_352fd5984f22a6f260df5f49b3c30482p15@OTUD4
2.74e-50FFCP PHASE1:Hg19::chrX:134232704..134232705,-#_352fd5984f22a6f260df5f49b3c30482p4@LINC00087
2.74e-50FFCP PHASE1:Hg19::chr4:146071958..146071961,-#_352fd5984f22a6f260df5f49b3c30482p15@OTUD4
2.74e-50FFCP PHASE1:Hg19::chr8:27606125..27606134,-#_352fd5984f22a6f260df5f49b3c30482p6@CCDC25
2.74e-50FFCP PHASE2:Hg19::chr15:91643336..91643337,+#_352fd5984f22a6f260df5f49b3c30482p19@SV2B
4.0e-50FFCP PHASE2:Hg19::chr2:166159804..166159805,+#_12fe6c384cc6f22ae9c507077ed7f69ep@chr2:166159804..166159805, +
4.0e-50FFCP PHASE1:Hg19::chr2:166159804..166159805,+#_12fe6c384cc6f22ae9c507077ed7f69ep@chr2:166159804..166159805, +
4.52e-50FFCP PHASE1:Hg19::chr14:72975302..72975305,+#_2912b4ec2b38ca087657da6bef9f1919p@chr14:72975302..72975305, +
4.52e-50FFCP PHASE2:Hg19::chr5:19774915..19774916,-#_2912b4ec2b38ca087657da6bef9f1919p@chr5:19774915..19774916, -
4.52e-50FFCP PHASE1:Hg19::chr11:132901592..132901601,-#_2912b4ec2b38ca087657da6bef9f1919p@chr11:132901592..132901601, -
4.52e-50FFCP PHASE1:Hg19::chr5:19774915..19774916,-#_2912b4ec2b38ca087657da6bef9f1919p@chr5:19774915..19774916, -
4.52e-50FFCP PHASE2:Hg19::chr5:27707663..27707672,+#_2912b4ec2b38ca087657da6bef9f1919p@chr5:27707663..27707672, +
4.52e-50FFCP PHASE1:Hg19::chr5:27707663..27707672,+#_2912b4ec2b38ca087657da6bef9f1919p@chr5:27707663..27707672, +
4.52e-50FFCP PHASE2:Hg19::chr5:44809742..44809753,+#_2912b4ec2b38ca087657da6bef9f1919p9@MRPS30
4.52e-50FFCP PHASE1:Hg19::chr5:44809742..44809753,+#_2912b4ec2b38ca087657da6bef9f1919p9@MRPS30
4.52e-50FFCP PHASE1:Hg19::chr10:3442892..3442893,+#_2912b4ec2b38ca087657da6bef9f1919p@chr10:3442892..3442893, +
4.52e-50FFCP PHASE2:Hg19::chr6:73906231..73906237,+#_2912b4ec2b38ca087657da6bef9f1919p@chr6:73906231..73906237, +
4.52e-50FFCP PHASE1:Hg19::chr6:73906231..73906237,+#_2912b4ec2b38ca087657da6bef9f1919p@chr6:73906231..73906237, +
4.52e-50FFCP PHASE2:Hg19::chr14:72975302..72975305,+#_2912b4ec2b38ca087657da6bef9f1919p@chr14:72975302..72975305, +
4.52e-50FFCP PHASE2:Hg19::chr11:132901592..132901601,-#_2912b4ec2b38ca087657da6bef9f1919p@chr11:132901592..132901601, -
4.52e-50FFCP PHASE2:Hg19::chr10:3442892..3442893,+#_2912b4ec2b38ca087657da6bef9f1919p@chr10:3442892..3442893, +
5.15e-50FFCP PHASE2:Hg19::chr6:112803862..112803893,+#_c67c095670499f2d6fc91bfd0fb6f658p@chr6:112803862..112803893, +
5.15e-50FFCP PHASE1:Hg19::chr6:112803862..112803893,+#_c67c095670499f2d6fc91bfd0fb6f658p@chr6:112803862..112803893, +
6.61e-50FFCP PHASE1:Hg19::chr7:82583500..82583510,-#_80d7349a8f426ae53d93cec766e1f759p@chr7:82583500..82583510, -
6.61e-50FFCP PHASE2:Hg19::chr7:82583500..82583510,-#_80d7349a8f426ae53d93cec766e1f759p@chr7:82583500..82583510, -
8.5e-50FFCP PHASE2:Hg19::chr2:60695331..60695343,-#_b7e59ab54c1c7658fe468cf01ae4fd13p@chr2:60695331..60695343, -
8.5e-50FFCP PHASE1:Hg19::chr2:60695331..60695343,-#_b7e59ab54c1c7658fe468cf01ae4fd13p@chr2:60695331..60695343, -
4.0e-45FFCP PHASE2:Hg19::chr15:31658349..31658358,+#_c966be7f55357aaa9cc206ef798e0a7fp33@KLF13
4.0e-45FFCP PHASE1:Hg19::chr15:31658349..31658358,+#_c966be7f55357aaa9cc206ef798e0a7fp33@KLF13
9.79e-45FFCP PHASE2:Hg19::chr4:143680975..143680979,-#_7795d558c3b8eface76e527db7d8bf66p@chr4:143680975..143680979, -
9.79e-45FFCP PHASE1:Hg19::chr4:143680975..143680979,-#_7795d558c3b8eface76e527db7d8bf66p@chr4:143680975..143680979, -
9.79e-45FFCP PHASE1:Hg19::chr3:49706223..49706234,+#_7795d558c3b8eface76e527db7d8bf66p@chr3:49706223..49706234, +
9.79e-45FFCP PHASE2:Hg19::chr3:49706223..49706234,+#_7795d558c3b8eface76e527db7d8bf66p@chr3:49706223..49706234, +
1.22e-44FFCP PHASE2:Hg19::chr3:121026029..121026045,+#_d805530e047e6aa48120d69083a8731ep@chr3:121026029..121026045, +
1.22e-44FFCP PHASE2:Hg19::chr13:89815478..89815491,-#_d805530e047e6aa48120d69083a8731ep@chr13:89815478..89815491, -
1.22e-44FFCP PHASE1:Hg19::chr13:89815478..89815491,-#_d805530e047e6aa48120d69083a8731ep@chr13:89815478..89815491, -
1.22e-44FFCP PHASE1:Hg19::chr3:121026029..121026045,+#_d805530e047e6aa48120d69083a8731ep@chr3:121026029..121026045, +
2.39e-44FFCP PHASE2:Hg19::chr5:21778572..21778576,-#_2fb99af862e51f4c70d5f5d3f4ccbc77p@chr5:21778572..21778576, -
2.39e-44FFCP PHASE1:Hg19::chr5:21778572..21778576,-#_2fb99af862e51f4c70d5f5d3f4ccbc77p@chr5:21778572..21778576, -
4.89e-41FFCP PHASE2:Hg19::chr21:16999470..16999481,-#_0dbe7e60b0310d8e8aa3109d864e8681p@chr21:16999470..16999481, -
4.89e-41FFCP PHASE1:Hg19::chr21:16999470..16999481,-#_0dbe7e60b0310d8e8aa3109d864e8681p@chr21:16999470..16999481, -
5.99e-41FFCP PHASE2:Hg19::chr5:165957466..165957467,-#_9d908edb1e17c6a4499100b4d590ee64p@chr5:165957466..165957467, -
5.99e-41FFCP PHASE1:Hg19::chr5:165957466..165957467,-#_9d908edb1e17c6a4499100b4d590ee64p@chr5:165957466..165957467, -
8.98e-41FFCP PHASE2:Hg19::chr6:69650460..69650462,+#_8b8ec7da0d3af3c9e7d1e52b72243fe3p@chr6:69650460..69650462, +
8.98e-41FFCP PHASE1:Hg19::chr6:69650460..69650462,+#_8b8ec7da0d3af3c9e7d1e52b72243fe3p@chr6:69650460..69650462, +
1.1e-40FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_17fbf4ad7cfa278bbf856b869f419bd3p@chr18:5721892..5721909, +
1.1e-40FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_17fbf4ad7cfa278bbf856b869f419bd3p@chr18:5721892..5721909, +
1.34e-40FFCP PHASE1:Hg19::chr17:57158545..57158556,-#_f46870f9941b9fb5425ebda4538c9fb7p@chr17:57158545..57158556, -
1.34e-40FFCP PHASE2:Hg19::chr17:57158545..57158556,-#_f46870f9941b9fb5425ebda4538c9fb7p@chr17:57158545..57158556, -
1.64e-40FFCP PHASE2:Hg19::chr6:72926217..72926229,+#_d1d329ae14770182495854c3dc7a2e16p15@RIMS1
1.64e-40FFCP PHASE1:Hg19::chr7:32519192..32519195,-#_d1d329ae14770182495854c3dc7a2e16p@chr7:32519192..32519195, -
1.64e-40FFCP PHASE1:Hg19::chr6:72926217..72926229,+#_d1d329ae14770182495854c3dc7a2e16p15@RIMS1
1.64e-40FFCP PHASE2:Hg19::chr7:32519192..32519195,-#_d1d329ae14770182495854c3dc7a2e16p@chr7:32519192..32519195, -
1.64e-40FFCP PHASE1:Hg19::chr12:75601501..75601517,-#_d1d329ae14770182495854c3dc7a2e16p11@KCNC2
1.64e-40FFCP PHASE2:Hg19::chr12:75601501..75601517,-#_d1d329ae14770182495854c3dc7a2e16p11@KCNC2
2.01e-40FFCP PHASE1:Hg19::chr12:121085388..121085391,+#_3fd2d2ceeaea387e974f69de43b4bcaep@chr12:121085388..121085391, +
2.01e-40FFCP PHASE2:Hg19::chr12:121085388..121085391,+#_3fd2d2ceeaea387e974f69de43b4bcaep@chr12:121085388..121085391, +
2.01e-40FFCP PHASE1:Hg19::chr12:79611427..79611436,+#_3fd2d2ceeaea387e974f69de43b4bcaep3@AB384875
2.01e-40FFCP PHASE2:Hg19::chr12:79611427..79611436,+#_3fd2d2ceeaea387e974f69de43b4bcaep3@AB384875
2.01e-40FFCP PHASE2:Hg19::chr1:177152304..177152308,+#_3fd2d2ceeaea387e974f69de43b4bcaep@chr1:177152304..177152308, +
2.01e-40FFCP PHASE1:Hg19::chr12:55368219..55368234,-#_3fd2d2ceeaea387e974f69de43b4bcaep@chr12:55368219..55368234, -

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