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{{UBERON
{{UBERON
|id=UBERON:0003643
|alt_id=
|name=respiratory system arterial blood vessel
|namespace=
|def="An arterial blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
|xref=MA:0001800
|is_a=UBERON:0003504;;UBERON:0003509
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An arterial blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003643
|is_a=UBERON:0003504 ;;UBERON:0003509
|is_obsolete=
|located_in=
|located_in=
|name=respiratory system arterial blood vessel
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001004
|part_of=UBERON:0001004
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MA:0001800
}}
}}

Latest revision as of 17:41, 12 September 2014

Name:respiratory system arterial blood vessel
Namespace:FANTOM
Definition:"An arterial blood vessel that is part of a respiratory system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001800

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003504(respiratory system blood vessel),UBERON:0003509(arterial blood vessel)
part_of:UBERON:0001004(respiratory system)



Children

is a:UBERON:0003469 (respiratory system artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003643 (respiratory system arterial blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_1d3fdca3eafbba5bc4a5d589270ef754p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_1d3fdca3eafbba5bc4a5d589270ef754p@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_1d3fdca3eafbba5bc4a5d589270ef754p@chr6:21648948..21648949, +
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_1d3fdca3eafbba5bc4a5d589270ef754p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_1d3fdca3eafbba5bc4a5d589270ef754p@chr8:90366581..90366594, -
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_1d3fdca3eafbba5bc4a5d589270ef754p@chr6:21648948..21648949, +
2.74e-50FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_2a89e6585c680d517c35d3688b806e5cp@chr4:70707556..70707558, -
2.74e-50FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_2a89e6585c680d517c35d3688b806e5cp@chr4:70707556..70707558, -
4.52e-50FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_b6d638165df7f72c32de4af9603529fcp26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_b6d638165df7f72c32de4af9603529fcp@chr8:120651826..120651840, -
4.52e-50FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_b6d638165df7f72c32de4af9603529fcp@chr3:158928407..158928414, +
4.52e-50FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_b6d638165df7f72c32de4af9603529fcp@chrX:23072856..23072859, -
4.52e-50FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_b6d638165df7f72c32de4af9603529fcp14@FAS
4.52e-50FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_b6d638165df7f72c32de4af9603529fcp26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_b6d638165df7f72c32de4af9603529fcp@chr3:158928407..158928414, +
4.52e-50FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_b6d638165df7f72c32de4af9603529fcp@chrX:23072856..23072859, -
4.52e-50FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_b6d638165df7f72c32de4af9603529fcp@chr8:120651826..120651840, -
4.52e-50FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_b6d638165df7f72c32de4af9603529fcp14@FAS
3.61e-34FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_decacc9e232cc44402ec842e683af559p@chr4:70707608..70707615, -
3.61e-34FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_decacc9e232cc44402ec842e683af559p@chr4:70707608..70707615, -
5.04e-34FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_9d7b16ec30dcd7159933b18f12972800p@chr3:156258392..156258395, -
5.04e-34FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_9d7b16ec30dcd7159933b18f12972800p@chr4:70690584..70690589, +
5.04e-34FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_9d7b16ec30dcd7159933b18f12972800p@chr17:76824975..76824978, -
5.04e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_9d7b16ec30dcd7159933b18f12972800p@chr11:131614903..131614910, -
5.04e-34FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_9d7b16ec30dcd7159933b18f12972800p@chr3:156258392..156258395, -
5.04e-34FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_9d7b16ec30dcd7159933b18f12972800p@chr4:70690584..70690589, +
5.04e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_9d7b16ec30dcd7159933b18f12972800p@chr11:131614903..131614910, -
5.04e-34FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_9d7b16ec30dcd7159933b18f12972800p@chr17:76824975..76824978, -
7.05e-34FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr7:22687639..22687644, +
7.05e-34FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_b7b7e7608030a93bfdf42bcb221018b7p1@CACNG8
7.05e-34FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_b7b7e7608030a93bfdf42bcb221018b7p19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr13:38136724..38136726, +
7.05e-34FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_b7b7e7608030a93bfdf42bcb221018b7p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_b7b7e7608030a93bfdf42bcb221018b7p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_b7b7e7608030a93bfdf42bcb221018b7p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_b7b7e7608030a93bfdf42bcb221018b7p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_b7b7e7608030a93bfdf42bcb221018b7p1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_b7b7e7608030a93bfdf42bcb221018b7p13@PTGIS
7.05e-34FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr7:22687639..22687644, +
7.05e-34FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_b7b7e7608030a93bfdf42bcb221018b7p1@CACNG8
7.05e-34FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_b7b7e7608030a93bfdf42bcb221018b7p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_b7b7e7608030a93bfdf42bcb221018b7p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_b7b7e7608030a93bfdf42bcb221018b7p19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_b7b7e7608030a93bfdf42bcb221018b7p1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_b7b7e7608030a93bfdf42bcb221018b7p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_b7b7e7608030a93bfdf42bcb221018b7p13@PTGIS
7.05e-34FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_b7b7e7608030a93bfdf42bcb221018b7p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_b7b7e7608030a93bfdf42bcb221018b7p@chr13:38136724..38136726, +
5.56e-26FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_66e60e8437e42545cb2afaae1de48dbap@chr9:33797893..33797903, +
5.56e-26FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_66e60e8437e42545cb2afaae1de48dbap@chr9:33797893..33797903, +
7.14e-26FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_7af400e5d88382a3d3e8a32459cc773fp@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_7af400e5d88382a3d3e8a32459cc773fp1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_7af400e5d88382a3d3e8a32459cc773fp16@HMGA1
7.14e-26FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_7af400e5d88382a3d3e8a32459cc773fp@chr17:61995172..61995199, -
7.14e-26FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_7af400e5d88382a3d3e8a32459cc773fp@chr18:65175930..65175941, +
7.14e-26FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_7af400e5d88382a3d3e8a32459cc773fp13@RAB11FIP5
7.14e-26FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_7af400e5d88382a3d3e8a32459cc773fp@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_7af400e5d88382a3d3e8a32459cc773fp@chr8:123580995..123581003, -
7.14e-26FFCP PHASE2:Hg19::chr4:891819..891820,-#_7af400e5d88382a3d3e8a32459cc773fp@chr4:891819..891820, -
7.14e-26FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_7af400e5d88382a3d3e8a32459cc773fp1@SNORD105
7.14e-26FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_7af400e5d88382a3d3e8a32459cc773fp@chr17:61995172..61995199, -
7.14e-26FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_7af400e5d88382a3d3e8a32459cc773fp@chr18:65175930..65175941, +
7.14e-26FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_7af400e5d88382a3d3e8a32459cc773fp13@RAB11FIP5
7.14e-26FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_7af400e5d88382a3d3e8a32459cc773fp@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_7af400e5d88382a3d3e8a32459cc773fp16@HMGA1
7.14e-26FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_7af400e5d88382a3d3e8a32459cc773fp1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr4:891819..891820,-#_7af400e5d88382a3d3e8a32459cc773fp@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_7af400e5d88382a3d3e8a32459cc773fp1@SNORD105
9.18e-26FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr9:33797981..33798005, -
9.18e-26FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_18bd1f6addc50bb3d8f2f23672ec518ep5@BC031228
9.18e-26FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_18bd1f6addc50bb3d8f2f23672ec518ep1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_18bd1f6addc50bb3d8f2f23672ec518ep@chr4:74392579..74392583, +
9.18e-26FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr5:146890197..146890224, -
9.18e-26FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr2:84316409..84316414, -
9.18e-26FFCP PHASE1:Hg19::chr3:11675748..11675759,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr3:11675748..11675759, -
9.18e-26FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_18bd1f6addc50bb3d8f2f23672ec518ep28@ANK2
9.18e-26FFCP PHASE2:Hg19::chr8:94712896..94712909,+#_18bd1f6addc50bb3d8f2f23672ec518ep10@FAM92A1
9.18e-26FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr2:238116338..238116342, -
9.18e-26FFCP PHASE1:Hg19::chr19:681941..681952,+#_18bd1f6addc50bb3d8f2f23672ec518ep@chr19:681941..681952, +
9.18e-26FFCP PHASE1:Hg19::chr1:185703364..185703371,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr1:185703364..185703371, -
9.18e-26FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_18bd1f6addc50bb3d8f2f23672ec518ep@chr6:148593641..148593643, +
9.18e-26FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr3:11675748..11675759, -
9.18e-26FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr5:146890197..146890224, -
9.18e-26FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_18bd1f6addc50bb3d8f2f23672ec518ep1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_18bd1f6addc50bb3d8f2f23672ec518ep28@ANK2
9.18e-26FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr15:71371688..71371691, -
9.18e-26FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_18bd1f6addc50bb3d8f2f23672ec518ep5@BC031228
9.18e-26FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_18bd1f6addc50bb3d8f2f23672ec518ep@chr4:74392579..74392583, +
9.18e-26FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_18bd1f6addc50bb3d8f2f23672ec518ep10@FAM92A1
9.18e-26FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_18bd1f6addc50bb3d8f2f23672ec518ep@chr2:84316409..84316414, -
9.18e-26FFCP PHASE2:Hg19::chr19:681941..681952,+#_18bd1f6addc50bb3d8f2f23672ec518ep@chr19:681941..681952, +

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