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{{UBERON
{{UBERON
|id=UBERON:0004291
|alt_id=
|name=heart rudiment
|namespace=
|def="a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube." [GO:0003313]
|xref=ZFA:0000115
|is_a=UBERON:0000483;;UBERON:0004120
|synonym="heart cone" EXACT [GO:0003313];;"rudimentary heart" EXACT [ZFA:0000115]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube." [GO:0003313]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0003084;;UBERON:0004139
|develops_from=UBERON:0003084;;UBERON:0004139
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004291
|is_a=UBERON:0012275
|is_obsolete=
|located_in=
|located_in=
|name=heart rudiment
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5hpf and 22hpf, and eventually telescope out into the primitive heart tube at 24hpf. Stainier 2001.[TAO]" xsd:string
|subset=
|synonym="heart cone" EXACT [GO:0003313];;"rudimentary heart" EXACT [ZFA:0000115]
|union_of=
|xref=TAO:0000115;;ZFA:0000115
}}
}}

Latest revision as of 17:45, 12 September 2014

Name:heart rudiment
Namespace:FANTOM
Definition:"a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube." [GO:0003313]
Xrefs:
links:

TAO:0000115

ZFA:0000115
Synonyms: "heart cone" EXACT [GO:0003313]
"rudimentary heart" EXACT [ZFA:0000115]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0012275(meso-epithelium)
develops_from:UBERON:0003084(heart primordium),UBERON:0004139(cardiogenic plate)



Children

develops from:UBERON:0005498 (primitive heart tube)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004291 (heart rudiment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "The migrating myocardial precursors of the heart rudiment form a cone like structure between 19.5hpf and 22hpf, and eventually telescope out into the primitive heart tube at 24hpf. Stainier 2001.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.