UBERON:0004782: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=gastrointestinal system serosa | |name=gastrointestinal system serosa | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0005409 | |part_of=UBERON:0005409 | ||
Latest revision as of 17:48, 12 September 2014
| Name: | gastrointestinal system serosa | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A serous membrane that is part of a digestive system [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"digestive system serosa" EXACT [OBOL:automatic] "digestive system serous membrane" EXACT [OBOL:automatic] "gastrointestinal system serous membrane" EXACT [OBOL:automatic] "serosa of digestive system" EXACT [OBOL:automatic] "serosa of gastrointestinal system" EXACT [OBOL:automatic] "serous membrane of digestive system" EXACT [OBOL:automatic] "serous membrane of gastrointestinal system" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000042(serous membrane) |
|---|---|
| part_of: | UBERON:0005409(gastrointestinal system) |
Children
| is a: | UBERON:0004854 (gastrointestinal system mesentery) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004782 (gastrointestinal system serosa), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:925449..925458,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p17@AP2A2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p60@SYNE1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@uc003pyn.1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000524012 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p19@RAPGEF5 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p3@ENST00000420186, p3@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p19@RAPGEF5 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859603..56859606, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p5@NR5A1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p5@NR5A1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr9:124516729..124516752, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859603..56859606, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@uc003pyn.1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr9:124516729..124516752, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p21@PTAFR |
| 8.98e-131 | FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p2@ENST00000517384 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p7@CD5L |
| 8.98e-131 | FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr16:84218794..84218800, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p4@ENST00000420186, p4@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr10:98014908..98014919, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p21@PTAFR |
| 8.98e-131 | FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr10:98014908..98014919, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859608..56859619, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p2@ENST00000517384 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859608..56859619, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p7@CD5L |
| 8.98e-131 | FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr19:32401253..32401271, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p4@ENST00000420186, p4@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000517384 |
| 8.98e-131 | FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p7@GDPD2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr16:84218794..84218800, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr15:95561320..95561328, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000420186, p1@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr17:78171885..78171900, + |
| 8.98e-131 | FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr10:98014943..98014960, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr10:98014943..98014960, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859638..56859643, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr19:32401253..32401271, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000517384 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859638..56859643, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p7@GDPD2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:1891326..1891337, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p10@VPS13A |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:1891326..1891337, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000501239 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000420186, p1@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:925449..925458,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p17@AP2A2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p11@PDLIM2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@uc001ftm.1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p8@NR5A1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p12@JDP2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p8@NR5A1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p10@VPS13A |
| 8.98e-131 | FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p2@ENST00000420186, p2@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr15:95561320..95561328, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000501239 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859693..56859701, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr9:127260615..127260651, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p11@PDLIM2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859693..56859701, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@uc001ftm.1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr9:127260615..127260651, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p60@SYNE1 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p18@AIF1L |
| 8.98e-131 | FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p2@ENST00000420186, p2@uc002ymh.2 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr17:78171885..78171900, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p12@JDP2 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p18@AIF1L |
| 8.98e-131 | FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859584..56859589, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p2@NR5A1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p2@NR5A1 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_aaac781f7b01d6b625e6e0ffcc061e2d | p1@ENST00000524012 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p@chr11:56859584..56859589, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_aaac781f7b01d6b625e6e0ffcc061e2d | p3@ENST00000420186, p3@uc002ymh.2 |
| 6.24e-88 | FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr11:56859722..56859732, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr11:56859722..56859732, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr22:36718586..36718593, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr4:146461014..146461025, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr22:36718586..36718593, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr3:130267501..130267516, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr9:127267367..127267383, + |
| 6.24e-88 | FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr9:127267367..127267383, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr4:146461014..146461025, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr3:130267501..130267516, + |
| 6.24e-88 | FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p15@KIF17 |
| 6.24e-88 | FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p15@KIF17 |
| 6.24e-88 | FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr19:32401274..32401289, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr19:32401274..32401289, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr21:40459334..40459341, + |
| 6.24e-88 | FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_2cf9b620a0e055ba61d1c41a492d0b05 | p@chr21:40459334..40459341, + |
| 9.74e-88 | FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr2:128321491..128321509, + |
| 9.74e-88 | FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr7:151070957..151070988, + |
| 9.74e-88 | FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr2:128321491..128321509, + |
| 9.74e-88 | FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr14:24168655..24168686, + |
| 9.74e-88 | FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr7:151070957..151070988, + |
| 9.74e-88 | FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr2:1508349..1508357, + |
| 9.74e-88 | FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr14:24168655..24168686, + |
| 9.74e-88 | FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_b0ac802ac1cf459edb396b2023932bd9 | p@chr2:1508349..1508357, + |
| 9.74e-88 | FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_b0ac802ac1cf459edb396b2023932bd9 | p6@IL34 |
| 9.74e-88 | FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_b0ac802ac1cf459edb396b2023932bd9 | p6@IL34 |
