UBERON:0004807: Difference between revisions
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|located_in= | |located_in= | ||
|name=respiratory system epithelium | |name=respiratory system epithelium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001004 | |part_of=UBERON:0001004 | ||
Latest revision as of 17:48, 12 September 2014
| Name: | respiratory system epithelium | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "An epithelium that is part of a respiratory system [Obol]." [OBOL:automatic] | |
| Xrefs: |
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| Synonyms: |
"apparatus respiratorius epithelial tissue" EXACT [OBOL:automatic] "apparatus respiratorius epithelium" EXACT [OBOL:automatic] "epithelial tissue of apparatus respiratorius" EXACT [OBOL:automatic] "epithelial tissue of respiratory system" EXACT [OBOL:automatic] "epithelium of apparatus respiratorius" EXACT [OBOL:automatic] "epithelium of respiratory system" EXACT [OBOL:automatic] "respiratory system epithelial tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium) |
|---|---|
| part_of: | UBERON:0001004(respiratory system) |
Children
| is a: | UBERON:0003351 (pharyngeal epithelium),UBERON:0004802 (respiratory tract epithelium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004807 (respiratory system epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
