UBERON:0005399: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005399 | |||
|is_a=UBERON:0003937 ;;UBERON:0014403 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=male reproductive gland | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000079 | |part_of=UBERON:0000079 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=organ_slim | ||
| | |synonym= | ||
|union_of= | |||
|xref=BTO:0000080;;MA:0000399 | |||
}} | }} | ||
Latest revision as of 17:53, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003937(sex gland),UBERON:0014403(male anatomical structure) |
|---|---|
| part_of: | UBERON:0000079(male reproductive system) |
Children
| is a: | UBERON:0006868 (seminal fluid secreting gland),UBERON:0010147 (male accessory sex gland) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10022-101D4 (prostate, adult, pool1)
- 10092-102C2
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
- 10491-107B5
- 11253-116F2 (Prostate Epithelial Cells (polarized), donor1)
- 11254-116F3 (Prostate Stromal Cells, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11331-117E8 (Prostate Epithelial Cells, donor2)
... further results Mouse (Mus musculus)
- 10022-101D4 (prostate, adult, pool1)
- 10092-102C2
- 10201-103F3 (seminal vesicle, adult)
- 10439-106E7 (prostate cancer cell line:PC-3)
- 10490-107B4 (prostate cancer cell line:DU145)
- 10491-107B5
- 11253-116F2 (Prostate Epithelial Cells (polarized), donor1)
- 11254-116F3 (Prostate Stromal Cells, donor1)
- 11257-116F6 (Smooth Muscle Cells - Prostate, donor1)
- 11331-117E8 (Prostate Epithelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005399 (male reproductive gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28920074..28920077,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28920074..28920077, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28922127..28922139,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922127..28922139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:41580319..41580330,+#_9f918517178583dbd25b2f87577d7bd0 | p9@Dnaic1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:80142485..80142488,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:80142485..80142488, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:75093434..75093448,-#_9f918517178583dbd25b2f87577d7bd0 | p@chrX:75093434..75093448, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:164160012..164160019,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:164160012..164160019, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28932044..28932051,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28932044..28932051, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:54982725..54982729,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:54982725..54982729, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28937935..28937949,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28937935..28937949, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:17361644..17361651,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr12:17361644..17361651, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28940253..28940263,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28940253..28940263, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:33240968..33241002,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr5:33240968..33241002, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:14661555..14661583,-#_9f918517178583dbd25b2f87577d7bd0 | p2@uc008iko.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42543522..42543533,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42543522..42543533, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122949581..122949586,+#_9f918517178583dbd25b2f87577d7bd0 | p4@Tgm4 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122949581..122949586,+#_9f918517178583dbd25b2f87577d7bd0 | p4@Tgm4 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42542355..42542361,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42542355..42542361, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:53713590..53713610,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:53713590..53713610, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9755844..9755850,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:9755844..9755850, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28949766..28949797,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28949766..28949797, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:186196122..186196127,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:186196122..186196127, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:86673943..86673972,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:86673943..86673972, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:124586894..124586896,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:124586894..124586896, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122976310..122976316,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122976310..122976316, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:90816764..90816767,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr16:90816764..90816767, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122976310..122976316,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122976310..122976316, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:44413083..44413113,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr18:44413083..44413113, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:95769561..95769572,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:95769561..95769572, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28927432..28927441,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28927432..28927441, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:40762574..40762606,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:40762574..40762606, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120000721..120000736,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:120000721..120000736, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28928876..28928883,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28928876..28928883, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:164101819..164101829,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:164101819..164101829, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42536870..42536884,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536870..42536884, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:137643541..137643591,-#_9f918517178583dbd25b2f87577d7bd0 | p@chrX:137643541..137643591, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:93026773..93026783,-#_9f918517178583dbd25b2f87577d7bd0 | p11@Ston2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28943007..28943015,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28943007..28943015, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28914655..28914657,+#_9f918517178583dbd25b2f87577d7bd0 | p10@9530053A07Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28916507..28916522,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28916507..28916522, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:88222368..88222373,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:88222368..88222373, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28924785..28924802,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28924785..28924802, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28925146..28925155,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28925146..28925155, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:73951886..73951889,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:73951886..73951889, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28926019..28926034,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28926019..28926034, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:36300880..36300894,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:36300880..36300894, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:120000741..120000746,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr11:120000741..120000746, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42536390..42536397,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536390..42536397, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:103890850..103890862,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr12:103890850..103890862, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42536199..42536211,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42536199..42536211, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28942567..28942583,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28942567..28942583, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28944445..28944450,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28944445..28944450, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28914161..28914201,+#_9f918517178583dbd25b2f87577d7bd0 | p4@9530053A07Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9803130..9803139,+#_9f918517178583dbd25b2f87577d7bd0 | p1@ENSMUST00000026889 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28922144..28922151,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922144..28922151, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:116675703..116675710,-#_9f918517178583dbd25b2f87577d7bd0 | p2@9530003J23Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:54955334..54955338,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:54955334..54955338, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28922605..28922615,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28922605..28922615, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28924808..28924822,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28924808..28924822, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:11354120..11354127,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr19:11354120..11354127, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:42535969..42535980,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42535969..42535980, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:155925154..155925155,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:155925154..155925155, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42535803..42535831,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42535803..42535831, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:55028182..55028186,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:55028182..55028186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28939712..28939733,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28939712..28939733, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28942567..28942583,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28942567..28942583, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122960444..122960465,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122960444..122960465, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:41338835..41338853,-#_9f918517178583dbd25b2f87577d7bd0 | p4@Tm9sf3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122960444..122960465,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122960444..122960465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42544112..42544123,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42544112..42544123, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28916770..28916787,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28916770..28916787, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:119352000..119352016,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:119352000..119352016, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:75090384..75090427,-#_9f918517178583dbd25b2f87577d7bd0 | p@chrX:75090384..75090427, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:22867311..22867335,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr8:22867311..22867335, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28928876..28928883,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28928876..28928883, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:56985658..56985672,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr14:56985658..56985672, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:110113780..110113790,-#_9f918517178583dbd25b2f87577d7bd0 | p13@Wars, p8@LOC640248 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:73951886..73951889,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr1:73951886..73951889, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:54955306..54955320,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:54955306..54955320, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28932184..28932193,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28932184..28932193, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28939659..28939670,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28939659..28939670, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:93017024..93017030,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr8:93017024..93017030, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:42540847..42540852,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:42540847..42540852, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:80142501..80142512,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:80142501..80142512, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:88222394..88222401,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr6:88222394..88222401, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:40222667..40222711,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:40222667..40222711, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28946181..28946186,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28946181..28946186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28916683..28916688,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28916683..28916688, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122970933..122970940,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122970933..122970940, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:110113780..110113790,-#_9f918517178583dbd25b2f87577d7bd0 | p13@Wars, p8@LOC640248 |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:137643541..137643591,-#_9f918517178583dbd25b2f87577d7bd0 | p@chrX:137643541..137643591, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122970933..122970940,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr9:122970933..122970940, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:83050951..83050986,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr15:83050951..83050986, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:83050951..83050986,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr15:83050951..83050986, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:28926019..28926034,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28926019..28926034, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:120075948..120075975,+#_9f918517178583dbd25b2f87577d7bd0 | p1@ENSMUST00000156235 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:103891512..103891525,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr12:103891512..103891525, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:28927465..28927475,+#_9f918517178583dbd25b2f87577d7bd0 | p@chr7:28927465..28927475, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:164101737..164101762,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr2:164101737..164101762, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:53713590..53713610,-#_9f918517178583dbd25b2f87577d7bd0 | p@chr10:53713590..53713610, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:41338835..41338853,-#_9f918517178583dbd25b2f87577d7bd0 | p4@Tm9sf3 |
