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{{UBERON
{{UBERON
|id=UBERON:0005399
|alt_id=
|name=male reproductive gland
|namespace=
|def=
|xref=BTO:0000080;;MA:0000399
|is_a=UBERON:0003937
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=organ_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005399
|is_a=UBERON:0003937 ;;UBERON:0014403
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=male reproductive gland
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000079
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym=
|union_of=
|xref=BTO:0000080;;MA:0000399
}}
}}

Latest revision as of 17:53, 12 September 2014

Name:male reproductive gland
Namespace:FANTOM
Xrefs:
links:

BTO:0000080

MA:0000399
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003937(sex gland),UBERON:0014403(male anatomical structure)
part_of:UBERON:0000079(male reproductive system)



Children

is a:UBERON:0006868 (seminal fluid secreting gland),UBERON:0010147 (male accessory sex gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005399 (male reproductive gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr7:28942544..28942554,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28942544..28942554, +
1.87e-86FFCP PHASE1:Mm9::chr12:17361677..17361698,+#_9f918517178583dbd25b2f87577d7bd0p1@Mir3066
1.87e-86FFCP PHASE2:Mm9::chr9:122976527..122976537,+#_9f918517178583dbd25b2f87577d7bd0p@chr9:122976527..122976537, +
1.87e-86FFCP PHASE2:Mm9::chr12:110122546..110122556,-#_9f918517178583dbd25b2f87577d7bd0p@chr12:110122546..110122556, -
1.87e-86FFCP PHASE2:Mm9::chr19:56552214..56552221,+#_9f918517178583dbd25b2f87577d7bd0p@chr19:56552214..56552221, +
1.87e-86FFCP PHASE1:Mm9::chr9:122960302..122960322,+#_9f918517178583dbd25b2f87577d7bd0p@chr9:122960302..122960322, +
1.87e-86FFCP PHASE1:Mm9::chr6:54242893..54242903,+#_9f918517178583dbd25b2f87577d7bd0p@chr6:54242893..54242903, +
1.87e-86FFCP PHASE1:Mm9::chr2:80157145..80157151,+#_9f918517178583dbd25b2f87577d7bd0p@chr2:80157145..80157151, +
1.87e-86FFCP PHASE1:Mm9::chr7:54955306..54955320,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:54955306..54955320, +
1.87e-86FFCP PHASE1:Mm9::chr1:55821487..55821490,-#_9f918517178583dbd25b2f87577d7bd0p@chr1:55821487..55821490, -
1.87e-86FFCP PHASE2:Mm9::chr1:72989318..72989328,+#_9f918517178583dbd25b2f87577d7bd0p@chr1:72989318..72989328, +
1.87e-86FFCP PHASE2:Mm9::chr11:120000741..120000746,-#_9f918517178583dbd25b2f87577d7bd0p@chr11:120000741..120000746, -
1.87e-86FFCP PHASE2:Mm9::chr7:28929217..28929228,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28929217..28929228, +
1.87e-86FFCP PHASE2:Mm9::chr9:36341313..36341355,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:36341313..36341355, -
1.87e-86FFCP PHASE1:Mm9::chr9:57794383..57794394,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:57794383..57794394, -
1.87e-86FFCP PHASE1:Mm9::chr7:28937836..28937843,-#_9f918517178583dbd25b2f87577d7bd0p@chr7:28937836..28937843, -
1.87e-86FFCP PHASE2:Mm9::chr7:28944445..28944450,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28944445..28944450, +
1.87e-86FFCP PHASE2:Mm9::chr9:122970856..122970866,+#_9f918517178583dbd25b2f87577d7bd0p@chr9:122970856..122970866, +
1.87e-86FFCP PHASE1:Mm9::chr2:80142485..80142488,+#_9f918517178583dbd25b2f87577d7bd0p@chr2:80142485..80142488, +
1.87e-86FFCP PHASE2:Mm9::chr12:32075675..32075688,+#_9f918517178583dbd25b2f87577d7bd0p3@Slc26a3
1.87e-86FFCP PHASE1:Mm9::chr7:28916715..28916726,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28916715..28916726, +
1.87e-86FFCP PHASE1:Mm9::chr6:118608760..118608766,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:118608760..118608766, -
1.87e-86FFCP PHASE2:Mm9::chr7:28927266..28927277,-#_9f918517178583dbd25b2f87577d7bd0p@chr7:28927266..28927277, -
1.87e-86FFCP PHASE2:Mm9::chr6:42536403..42536406,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42536403..42536406, -
1.87e-86FFCP PHASE2:Mm9::chr12:103891512..103891525,-#_9f918517178583dbd25b2f87577d7bd0p@chr12:103891512..103891525, -
1.87e-86FFCP PHASE1:Mm9::chr7:28927608..28927615,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28927608..28927615, +
1.87e-86FFCP PHASE2:Mm9::chr19:11354136..11354149,-#_9f918517178583dbd25b2f87577d7bd0p@chr19:11354136..11354149, -
1.87e-86FFCP PHASE1:Mm9::chr12:110113751..110113760,-#_9f918517178583dbd25b2f87577d7bd0p10@LOC640248, p16@Wars
1.87e-86FFCP PHASE2:Mm9::chr7:28942590..28942600,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28942590..28942600, +
1.87e-86FFCP PHASE2:Mm9::chr7:28914121..28914125,+#_9f918517178583dbd25b2f87577d7bd0p5@9530053A07Rik
1.87e-86FFCP PHASE1:Mm9::chr7:28939647..28939657,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28939647..28939657, +
1.87e-86FFCP PHASE1:Mm9::chr6:42536390..42536397,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42536390..42536397, -
1.87e-86FFCP PHASE2:Mm9::chr7:28922452..28922463,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28922452..28922463, +
1.87e-86FFCP PHASE1:Mm9::chr7:28947798..28947809,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28947798..28947809, +
1.87e-86FFCP PHASE2:Mm9::chr7:28924835..28924855,-#_9f918517178583dbd25b2f87577d7bd0p@chr7:28924835..28924855, -
1.87e-86FFCP PHASE1:Mm9::chr9:122970913..122970920,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:122970913..122970920, -
1.87e-86FFCP PHASE2:Mm9::chr1:155925362..155925372,+#_9f918517178583dbd25b2f87577d7bd0p@chr1:155925362..155925372, +
1.87e-86FFCP PHASE1:Mm9::chr9:36341385..36341396,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:36341385..36341396, -
1.87e-86FFCP PHASE1:Mm9::chr7:28925214..28925235,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28925214..28925235, +
1.87e-86FFCP PHASE2:Mm9::chr6:88222368..88222373,+#_9f918517178583dbd25b2f87577d7bd0p@chr6:88222368..88222373, +
1.87e-86FFCP PHASE1:Mm9::chr12:103890850..103890862,-#_9f918517178583dbd25b2f87577d7bd0p@chr12:103890850..103890862, -
1.87e-86FFCP PHASE2:Mm9::chr7:28939739..28939749,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28939739..28939749, +
1.87e-86FFCP PHASE1:Mm9::chr9:36341313..36341355,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:36341313..36341355, -
1.87e-86FFCP PHASE1:Mm9::chr19:41338815..41338828,-#_9f918517178583dbd25b2f87577d7bd0p5@Tm9sf3
1.87e-86FFCP PHASE2:Mm9::chr9:122960541..122960563,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:122960541..122960563, -
1.87e-86FFCP PHASE2:Mm9::chr7:28947742..28947743,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28947742..28947743, +
1.87e-86FFCP PHASE1:Mm9::chr7:28942665..28942673,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28942665..28942673, +
1.87e-86FFCP PHASE1:Mm9::chr1:155925154..155925155,+#_9f918517178583dbd25b2f87577d7bd0p@chr1:155925154..155925155, +
1.87e-86FFCP PHASE1:Mm9::chr12:58602200..58602208,+#_9f918517178583dbd25b2f87577d7bd0p@chr12:58602200..58602208, +
1.87e-86FFCP PHASE2:Mm9::chr12:58602200..58602208,+#_9f918517178583dbd25b2f87577d7bd0p@chr12:58602200..58602208, +
1.87e-86FFCP PHASE1:Mm9::chrX:75093343..75093356,-#_9f918517178583dbd25b2f87577d7bd0p@chrX:75093343..75093356, -
1.87e-86FFCP PHASE1:Mm9::chr9:122965562..122965571,+#_9f918517178583dbd25b2f87577d7bd0p@chr9:122965562..122965571, +
1.87e-86FFCP PHASE1:Mm9::chr6:86711159..86711165,-#_9f918517178583dbd25b2f87577d7bd0p10@Anxa4
1.87e-86FFCP PHASE1:Mm9::chr2:8718673..8718686,+#_9f918517178583dbd25b2f87577d7bd0p@chr2:8718673..8718686, +
1.87e-86FFCP PHASE2:Mm9::chrX:75090384..75090427,-#_9f918517178583dbd25b2f87577d7bd0p@chrX:75090384..75090427, -
1.87e-86FFCP PHASE2:Mm9::chr18:44415494..44415497,-#_9f918517178583dbd25b2f87577d7bd0p@chr18:44415494..44415497, -
1.87e-86FFCP PHASE2:Mm9::chr1:73951931..73951939,-#_9f918517178583dbd25b2f87577d7bd0p@chr1:73951931..73951939, -
1.87e-86FFCP PHASE2:Mm9::chr7:54955334..54955338,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:54955334..54955338, +
1.87e-86FFCP PHASE2:Mm9::chr7:28932441..28932449,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28932441..28932449, +
1.87e-86FFCP PHASE2:Mm9::chr6:42542355..42542361,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42542355..42542361, -
1.87e-86FFCP PHASE2:Mm9::chr9:122943778..122943800,+#_9f918517178583dbd25b2f87577d7bd0p2@Tgm4
1.87e-86FFCP PHASE1:Mm9::chr6:42535969..42535980,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42535969..42535980, -
1.87e-86FFCP PHASE1:Mm9::chr7:28940253..28940263,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28940253..28940263, +
1.87e-86FFCP PHASE1:Mm9::chr5:33240968..33241002,+#_9f918517178583dbd25b2f87577d7bd0p@chr5:33240968..33241002, +
1.87e-86FFCP PHASE1:Mm9::chr2:14661555..14661583,-#_9f918517178583dbd25b2f87577d7bd0p2@uc008iko.1
1.87e-86FFCP PHASE2:Mm9::chr6:124520338..124520341,+#_9f918517178583dbd25b2f87577d7bd0p5@C1rb
1.87e-86FFCP PHASE2:Mm9::chr9:122970964..122970995,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:122970964..122970995, -
1.87e-86FFCP PHASE1:Mm9::chr9:122949581..122949586,+#_9f918517178583dbd25b2f87577d7bd0p4@Tgm4
1.87e-86FFCP PHASE1:Mm9::chr6:42542355..42542361,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42542355..42542361, -
1.87e-86FFCP PHASE1:Mm9::chr10:53713590..53713610,-#_9f918517178583dbd25b2f87577d7bd0p@chr10:53713590..53713610, -
1.87e-86FFCP PHASE2:Mm9::chr17:27934517..27934519,-#_9f918517178583dbd25b2f87577d7bd0p@chr17:27934517..27934519, -
1.87e-86FFCP PHASE1:Mm9::chr7:28922127..28922139,-#_9f918517178583dbd25b2f87577d7bd0p@chr7:28922127..28922139, -
1.87e-86FFCP PHASE1:Mm9::chr4:41580319..41580330,+#_9f918517178583dbd25b2f87577d7bd0p9@Dnaic1
1.87e-86FFCP PHASE2:Mm9::chr9:57794383..57794394,-#_9f918517178583dbd25b2f87577d7bd0p@chr9:57794383..57794394, -
1.87e-86FFCP PHASE2:Mm9::chr7:28927502..28927529,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28927502..28927529, +
1.87e-86FFCP PHASE2:Mm9::chr2:164101774..164101787,-#_9f918517178583dbd25b2f87577d7bd0p@chr2:164101774..164101787, -
1.87e-86FFCP PHASE2:Mm9::chr10:53713615..53713626,-#_9f918517178583dbd25b2f87577d7bd0p@chr10:53713615..53713626, -
1.87e-86FFCP PHASE1:Mm9::chr2:164160012..164160019,+#_9f918517178583dbd25b2f87577d7bd0p@chr2:164160012..164160019, +
1.87e-86FFCP PHASE2:Mm9::chr6:42536870..42536884,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42536870..42536884, -
1.87e-86FFCP PHASE2:Mm9::chr3:94930111..94930121,+#_9f918517178583dbd25b2f87577d7bd0p5@Tmod4
1.87e-86FFCP PHASE1:Mm9::chr7:28932044..28932051,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28932044..28932051, +
1.87e-86FFCP PHASE2:Mm9::chr2:103012501..103012510,-#_9f918517178583dbd25b2f87577d7bd0p@chr2:103012501..103012510, -
1.87e-86FFCP PHASE2:Mm9::chr7:28942800..28942808,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28942800..28942808, +
1.87e-86FFCP PHASE2:Mm9::chr2:164158520..164158525,+#_9f918517178583dbd25b2f87577d7bd0p5@Svs5
1.87e-86FFCP PHASE2:Mm9::chr1:55821487..55821490,-#_9f918517178583dbd25b2f87577d7bd0p@chr1:55821487..55821490, -
1.87e-86FFCP PHASE2:Mm9::chr9:122965760..122965771,+#_9f918517178583dbd25b2f87577d7bd0p@chr9:122965760..122965771, +
1.87e-86FFCP PHASE2:Mm9::chr16:87443461..87443465,-#_9f918517178583dbd25b2f87577d7bd0p@chr16:87443461..87443465, -
1.87e-86FFCP PHASE1:Mm9::chr6:42536870..42536884,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42536870..42536884, -
1.87e-86FFCP PHASE2:Mm9::chr2:80142412..80142415,+#_9f918517178583dbd25b2f87577d7bd0p@chr2:80142412..80142415, +
1.87e-86FFCP PHASE1:Mm9::chr7:28916507..28916522,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28916507..28916522, +
1.87e-86FFCP PHASE1:Mm9::chr1:186196122..186196127,+#_9f918517178583dbd25b2f87577d7bd0p@chr1:186196122..186196127, +
1.87e-86FFCP PHASE2:Mm9::chr2:80158173..80158181,+#_9f918517178583dbd25b2f87577d7bd0p@chr2:80158173..80158181, +
1.87e-86FFCP PHASE1:Mm9::chr11:86673943..86673972,+#_9f918517178583dbd25b2f87577d7bd0p@chr11:86673943..86673972, +
1.87e-86FFCP PHASE2:Mm9::chr7:28925200..28925211,-#_9f918517178583dbd25b2f87577d7bd0p@chr7:28925200..28925211, -
1.87e-86FFCP PHASE1:Mm9::chr9:122976310..122976316,+#_9f918517178583dbd25b2f87577d7bd0p@chr9:122976310..122976316, +
1.87e-86FFCP PHASE1:Mm9::chr18:44413083..44413113,-#_9f918517178583dbd25b2f87577d7bd0p@chr18:44413083..44413113, -
1.87e-86FFCP PHASE1:Mm9::chr10:95769561..95769572,-#_9f918517178583dbd25b2f87577d7bd0p@chr10:95769561..95769572, -
1.87e-86FFCP PHASE2:Mm9::chr6:42536268..42536279,-#_9f918517178583dbd25b2f87577d7bd0p@chr6:42536268..42536279, -
1.87e-86FFCP PHASE2:Mm9::chr17:12166400..12166446,-#_9f918517178583dbd25b2f87577d7bd0p@chr17:12166400..12166446, -
1.87e-86FFCP PHASE1:Mm9::chr7:28927432..28927441,+#_9f918517178583dbd25b2f87577d7bd0p@chr7:28927432..28927441, +

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