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{{UBERON
{{UBERON
|id=UBERON:0005403
|alt_id=UBERON:MA_0002972-FMA_77614
|name=ventral striatum
|namespace=
|def=
|xref=ABA:STRv;;BTO:0004702;;EFO:0001936;;FMA:77614;;MA:0002972
|is_a=UBERON:0003528
|synonym=
|comment=
|comment=
|alt_id=UBERON:MA_0002972-FMA_77614
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005403
|is_a=UBERON:0011300
|is_obsolete=
|located_in=
|located_in=
|name=ventral striatum
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0002435
|part_of=UBERON:0002435
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=ABA:STRv;;BTO:0004702;;EFO:0001936;;FMA:77614;;MA:0002972
}}
}}

Latest revision as of 17:53, 12 September 2014

Name:ventral striatum
Namespace:FANTOM
Xrefs:
links:

ABA:STRv
BTO:0004702
EFO:0001936
FMA:77614

MA:0002972
Alt_id: UBERON:MA_0002972-FMA_77614

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0011300(gray matter of telencephalon)
part_of:UBERON:0002435(striatum)



Children

part of:UBERON:0001882 (nucleus accumbens)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005403 (ventral striatum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data