UBERON:0005403: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0005403
|name=ventral striatum
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|xref=ABA:STRv;;BTO:0004702;;EFO:0001936;;FMA:77614;;MA:0002972
|is_a=UBERON:0002020;;UBERON:0003528...") |
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:MA_0002972-FMA_77614 | ||
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|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|has_quality= | |has_quality= | ||
|id=UBERON:0005403 | |||
|is_a=UBERON:0011300 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=ventral striatum | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002435 | |part_of=UBERON:0002435 | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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|xref=ABA:STRv;;BTO:0004702;;EFO:0001936;;FMA:77614;;MA:0002972 | |||
}} | }} |
Latest revision as of 17:53, 12 September 2014
Name: | ventral striatum | ||
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Namespace: | FANTOM | ||
Xrefs: |
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Alt_id: | UBERON:MA_0002972-FMA_77614 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0011300(gray matter of telencephalon) |
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part_of: | UBERON:0002435(striatum) |
Children
part of: | UBERON:0001882 (nucleus accumbens) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10037-101F1 (nucleus accumbens, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005403 (ventral striatum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data