UBERON:0005408: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=AO notes: MA subdivides into sensory and secretory | |comment=AO notes: MA subdivides into sensory and secretory | ||
|created_by= | |created_by= | ||
| | |def="Brain region located around or in relation to the ventricular system that is highly vascularized and distinguished by the lack of a blood brain barrier." [NIF_GrossAnatomy:nlx_anat_20090312, Wikipedia:Circumventricular_organs] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005408 | |||
|is_a=UBERON:0002616 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=circumventricular organ | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000955 | |part_of=UBERON:0000955 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="circumventricular organ" EXACT [NIF_GrossAnatomy:nlx_anat_20090312];;"CVO" EXACT [NIF_GrossAnatomy:nlx_anat_20090312] | ||
|union_of= | |||
|xref=FMA:84081;;http://upload.wikimedia.org/wikipedia/commons/7/7d/Gray734.png;;MA:0002942;;NIF_GrossAnatomy:nlx_anat_20090312 | |||
}} | }} | ||
Latest revision as of 17:53, 12 September 2014
| Name: | circumventricular organ | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Brain region located around or in relation to the ventricular system that is highly vascularized and distinguished by the lack of a blood brain barrier." [NIF_GrossAnatomy:nlx_anat_20090312, Wikipedia:Circumventricular_organs] | |
| Xrefs: |
| |
| Synonyms: |
"circumventricular organ" EXACT [NIF_GrossAnatomy:nlx_anat_20090312] "CVO" EXACT [NIF_GrossAnatomy:nlx_anat_20090312] | |
| Comments: | AO notes: MA subdivides into sensory and secretory |
Gray734.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002616(regional part of brain) |
|---|---|
| part_of: | UBERON:0000955(brain) |
Children
| is a: | UBERON:0010134 (secretory circumventricular organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005408 (circumventricular organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
