UBERON:0007297: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007297 | |||
|is_a=UBERON:0006598 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=presumptive pronephric mesoderm | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="nephron primordium" EXACT [ZFA:0001070] | ||
|union_of= | |||
|xref=EFO:0003619;;TAO:0001070;;ZFA:0001070 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
| Name: | presumptive pronephric mesoderm | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "nephron primordium" EXACT [ZFA:0001070] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|
Children
| develops from: | UBERON:0005721 (pronephric mesoderm) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7 | p4@Spink12 |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402d | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419edd | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419edd | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419edd | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419edd | p@chr14:63585020..63585025, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517b | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517b | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517b | p2@Eddm3b |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67e | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562f | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562f | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562f | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr18:44319583..44319592, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378766..21378781,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21378766..21378781, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr11:101959282..101959299, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21383212..21383225, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:112721323..112721328,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr5:112721323..112721328, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:113585714..113585722, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:39707572..39707583, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:20419453..20419476, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p2@ENSMUST00000152401 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:155722142..155722175, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21379261..21379264, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:105797824..105797838,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p13@Cyb561 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p2@Wfdc11 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@Arhgef40 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:75798097..75798101, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:130496286..130496293, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:192816674..192816714, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr16:43230846..43230884, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@uc007mmw.1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:23683348..23683398, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:19141371..19141383, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26611214..26611227, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr18:44261480..44261486, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Rnase13 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Defb20 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:104945515..104945524, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p7@P4ha2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:192816674..192816714, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Ido1 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35657557..35657582,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p2@Gm3428 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26731771..26731780, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p19@Clu |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:164434346..164434353, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90155707..90155720, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr4:106730107..106730125, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:160573065..160573077, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p17@Capn5 |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:75798097..75798101, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:155698166..155698174, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:172632171..172632178, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chrX:130496286..130496293, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p4@Gm17727 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr6:83487114..83487124, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p5@Lcn12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr15:75347689..75347703, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p3@Gm6040, p3@LOC100503992 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26704579..26704582, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr7:151927980..151927988, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87936213..87936218,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:87936213..87936218, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr14:63611201..63611210, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr1:90155923..90155932, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr13:21378968..21378988, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr4:33600466..33600491, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr9:26611214..26611227, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p21@Pgap2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr12:16664708..16664723, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:164434346..164434353, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr8:96014490..96014496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@Wars |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p@chr2:75866210..75866235, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_6b2567d87d29aa604c7e3f1b9ed9ab35 | p11@Prrx1 |
