UBERON:0007845: Difference between revisions
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|located_in= | |located_in= | ||
|name=regular connective tissue | |name=regular connective tissue | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 18:03, 12 September 2014
| Name: | regular connective tissue | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Connective tissue, which consists of fibroblasts, the intercellular matrix of which contains a regular network of collagen and elastic fiber bundles. Examples: bone (tissue), cartilage (tissue), dense regular collagenous tissue." [FMA:20103] | ||
| Xrefs: |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002384(connective tissue) |
|---|
Children
| is a: | UBERON:0007846 (dense regular connective tissue) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10264-104D3
- 10267-104D6
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
- 10320-105A5
- 10323-105A8
- 11763-123H8 (tenocyte, donor1)
- 11765-123I1 (tenocyte, donor2)
- 11768-123I4 (tenocyte, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007845 (regular connective tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.74e-88 | FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_06c23221fc65268c7e347037f9dfa5ea | p@chr1:203150041..203150049, - |
| 9.74e-88 | FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_06c23221fc65268c7e347037f9dfa5ea | p@chr1:203150041..203150049, - |
| 2.75e-74 | FFCP PHASE1:Hg19::chr5:79375755..79375801,+#_b97bb80563c9b3f56cec31a918f02ea0 | p@chr5:79375755..79375801, + |
| 2.75e-74 | FFCP PHASE2:Hg19::chr5:79375755..79375801,+#_b97bb80563c9b3f56cec31a918f02ea0 | p@chr5:79375755..79375801, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:4396380..4396381,-#_3f64febb10c1105bdbfaad9a7f8d0d8d | p@chr4:4396380..4396381, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr11:27541356..27541360,+#_3f64febb10c1105bdbfaad9a7f8d0d8d | p@chr11:27541356..27541360, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:43016260..43016261,+#_3f64febb10c1105bdbfaad9a7f8d0d8d | p@chr7:43016260..43016261, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr11:27541356..27541360,+#_3f64febb10c1105bdbfaad9a7f8d0d8d | p@chr11:27541356..27541360, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:4396380..4396381,-#_3f64febb10c1105bdbfaad9a7f8d0d8d | p@chr4:4396380..4396381, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:43016260..43016261,+#_3f64febb10c1105bdbfaad9a7f8d0d8d | p@chr7:43016260..43016261, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr1:203150031..203150040,-#_9ac68041f8cafa4a21ca1f4527f9aa41 | p@chr1:203150031..203150040, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr1:203150031..203150040,-#_9ac68041f8cafa4a21ca1f4527f9aa41 | p@chr1:203150031..203150040, - |
| 2.41e-66 | FFCP PHASE1:Hg19::chr8:120608233..120608244,-#_18a3cdf0e51d1f11cd2a5761e7863669 | p@chr8:120608233..120608244, - |
| 2.41e-66 | FFCP PHASE2:Hg19::chr8:120608233..120608244,-#_18a3cdf0e51d1f11cd2a5761e7863669 | p@chr8:120608233..120608244, - |
| 1.22e-59 | FFCP PHASE1:Hg19::chr7:80373118..80373135,-#_08ba7c842f364c6bc8be9b1923d3296c | p21@SEMA3C |
| 1.22e-59 | FFCP PHASE2:Hg19::chr7:80373118..80373135,-#_08ba7c842f364c6bc8be9b1923d3296c | p21@SEMA3C |
| 3.13e-54 | FFCP PHASE1:Hg19::chr8:57353995..57354004,-#_bd629c5d4d64afcd3546a7c89eb4a466 | p@chr8:57353995..57354004, - |
| 3.13e-54 | FFCP PHASE2:Hg19::chr8:57353995..57354004,-#_bd629c5d4d64afcd3546a7c89eb4a466 | p@chr8:57353995..57354004, - |
| 9.77e-45 | FFCP PHASE2:Hg19::chr6:159660765..159660776,+#_4fce0838bb19101d249995ca33613f31 | p@chr6:159660765..159660776, + |
| 9.77e-45 | FFCP PHASE1:Hg19::chr6:159660765..159660776,+#_4fce0838bb19101d249995ca33613f31 | p@chr6:159660765..159660776, + |
| 6.64e-41 | FFCP PHASE2:Hg19::chr1:56962127..56962135,-#_f52f370b97b5be8f27e96e5a0fcd6558 | p@chr1:56962127..56962135, - |
| 6.64e-41 | FFCP PHASE1:Hg19::chr1:56962127..56962135,-#_f52f370b97b5be8f27e96e5a0fcd6558 | p@chr1:56962127..56962135, - |
| 2.93e-40 | FFCP PHASE1:Hg19::chr4:26492048..26492059,-#_d494408d50145450d281dad064d8745d | p3@CCKAR |
| 2.93e-40 | FFCP PHASE2:Hg19::chr4:26492048..26492059,-#_d494408d50145450d281dad064d8745d | p3@CCKAR |
| 9.77e-40 | FFCP PHASE2:Hg19::chr8:57354119..57354137,+#_eb98bd899c42a59d59759de7faeac621 | p@chr8:57354119..57354137, + |
| 9.77e-40 | FFCP PHASE1:Hg19::chr8:57354119..57354137,+#_eb98bd899c42a59d59759de7faeac621 | p@chr8:57354119..57354137, + |
| 1.46e-39 | FFCP PHASE1:Hg19::chr19:18895742..18895757,-#_9787ea606b991d9962a08f28d85b211a | p@chr19:18895742..18895757, - |
| 1.46e-39 | FFCP PHASE2:Hg19::chr19:18895742..18895757,-#_9787ea606b991d9962a08f28d85b211a | p@chr19:18895742..18895757, - |
| 6.91e-39 | FFCP PHASE1:Hg19::chr7:15725581..15725587,-#_7abe3a84c04228e74f3eec47110b232f | p13@MEOX2 |
| 6.91e-39 | FFCP PHASE2:Hg19::chr7:15725581..15725587,-#_7abe3a84c04228e74f3eec47110b232f | p13@MEOX2 |
| 8.37e-39 | FFCP PHASE2:Hg19::chr1:203149809..203149816,-#_6f4d2f96c64073b9f66c8092f0f04831 | p@chr1:203149809..203149816, - |
| 8.37e-39 | FFCP PHASE1:Hg19::chr1:203149809..203149816,-#_6f4d2f96c64073b9f66c8092f0f04831 | p@chr1:203149809..203149816, - |
| 1.01e-38 | FFCP PHASE1:Hg19::chr1:203152872..203152879,-#_34a48d7a33bc2ec4483d342b557d50ed | p@chr1:203152872..203152879, - |
| 1.01e-38 | FFCP PHASE2:Hg19::chr1:203152872..203152879,-#_34a48d7a33bc2ec4483d342b557d50ed | p@chr1:203152872..203152879, - |
| 3.19e-38 | FFCP PHASE2:Hg19::chr18:61495529..61495546,+#_7d92553e7e4df353899361b0f4d6852e | p@chr18:61495529..61495546, + |
| 3.19e-38 | FFCP PHASE1:Hg19::chr18:61495529..61495546,+#_7d92553e7e4df353899361b0f4d6852e | p@chr18:61495529..61495546, + |
| 8.41e-38 | FFCP PHASE2:Hg19::chr8:110346720..110346722,-#_d5e177680eebdf476a39061fd7ae3cfe | p5@NUDCD1 |
| 8.41e-38 | FFCP PHASE1:Hg19::chr8:110346720..110346722,-#_d5e177680eebdf476a39061fd7ae3cfe | p5@NUDCD1 |
| 2.95e-37 | FFCP PHASE2:Hg19::chr10:28033776..28033788,+#_a0cd0e6b31d1fc16170d319cfd3f8d1e | p1@ENST00000419777 |
| 2.95e-37 | FFCP PHASE1:Hg19::chr10:28033776..28033788,+#_a0cd0e6b31d1fc16170d319cfd3f8d1e | p1@ENST00000419777 |
| 1.39e-34 | FFCP PHASE2:Hg19::chr1:203148394..203148401,-#_931900e1ad770c8f51dd4f3a9c76d11f | p10@CHI3L1 |
| 1.39e-34 | FFCP PHASE1:Hg19::chr1:203148394..203148401,-#_931900e1ad770c8f51dd4f3a9c76d11f | p10@CHI3L1 |
| 2.19e-34 | FFCP PHASE1:Hg19::chr12:91502776..91502785,-#_ce25245fbe8bf7b2f8139780c7c12322 | p15@LUM |
| 2.19e-34 | FFCP PHASE1:Hg19::chr7:87906696..87906704,-#_ce25245fbe8bf7b2f8139780c7c12322 | p@chr7:87906696..87906704, - |
| 2.19e-34 | FFCP PHASE2:Hg19::chr12:91502776..91502785,-#_ce25245fbe8bf7b2f8139780c7c12322 | p15@LUM |
| 2.19e-34 | FFCP PHASE2:Hg19::chr7:87906696..87906704,-#_ce25245fbe8bf7b2f8139780c7c12322 | p@chr7:87906696..87906704, - |
| 4.27e-34 | FFCP PHASE2:Hg19::chr1:203153416..203153419,-#_1c91cbf3e0c18e02e4993924652c8e15 | p@chr1:203153416..203153419, - |
| 4.27e-34 | FFCP PHASE1:Hg19::chr1:203153416..203153419,-#_1c91cbf3e0c18e02e4993924652c8e15 | p@chr1:203153416..203153419, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr1:110471879..110471901,+#_1d4dc9e5aa6f328f94f9766e520286ff | p@chr1:110471879..110471901, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr1:110471879..110471901,+#_1d4dc9e5aa6f328f94f9766e520286ff | p@chr1:110471879..110471901, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:127350469..127350475,-#_1d4dc9e5aa6f328f94f9766e520286ff | p@chr10:127350469..127350475, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:127350469..127350475,-#_1d4dc9e5aa6f328f94f9766e520286ff | p@chr10:127350469..127350475, - |
| 8.46e-34 | FFCP PHASE2:Hg19::chr1:56320708..56320728,-#_9d5ef75a3fc40b316887c71be183d9d6 | p@chr1:56320708..56320728, - |
| 8.46e-34 | FFCP PHASE1:Hg19::chr1:56320708..56320728,-#_9d5ef75a3fc40b316887c71be183d9d6 | p@chr1:56320708..56320728, - |
| 9.1e-34 | FFCP PHASE2:Hg19::chr8:57354463..57354473,+#_58060b87a1fea85235dc9780635676a7 | p@chr8:57354463..57354473, + |
| 9.1e-34 | FFCP PHASE1:Hg19::chr8:57354463..57354473,+#_58060b87a1fea85235dc9780635676a7 | p@chr8:57354463..57354473, + |
| 2.31e-33 | FFCP PHASE1:Hg19::chr18:43418712..43418734,+#_22020a027586eacd91328fb366d0af4e | p7@SIGLEC15 |
| 2.31e-33 | FFCP PHASE2:Hg19::chr18:43418712..43418734,+#_22020a027586eacd91328fb366d0af4e | p7@SIGLEC15 |
| 7.76e-32 | FFCP PHASE2:Hg19::chr19:18899448..18899459,-#_4fe5dd283202ba62917f9ff884af3a78 | p@chr19:18899448..18899459, - |
| 7.76e-32 | FFCP PHASE1:Hg19::chr19:18899448..18899459,-#_4fe5dd283202ba62917f9ff884af3a78 | p@chr19:18899448..18899459, - |
| 1.32e-31 | FFCP PHASE2:Hg19::chr3:100494130..100494141,-#_0b118fb4f872fadc6dd678c27944ca63 | p@chr3:100494130..100494141, - |
| 1.32e-31 | FFCP PHASE1:Hg19::chr3:100494130..100494141,-#_0b118fb4f872fadc6dd678c27944ca63 | p@chr3:100494130..100494141, - |
| 9.03e-31 | FFCP PHASE2:Hg19::chr19:18900031..18900054,+#_174ee83358bf0ff6fb96f169a01b00c9 | p@chr19:18900031..18900054, + |
| 9.03e-31 | FFCP PHASE1:Hg19::chr19:18900031..18900054,+#_174ee83358bf0ff6fb96f169a01b00c9 | p@chr19:18900031..18900054, + |
| 1.09e-30 | FFCP PHASE2:Hg19::chr1:161969956..161969963,-#_611af8cca94d81c65f4e60352314202d | p@chr1:161969956..161969963, - |
| 1.09e-30 | FFCP PHASE1:Hg19::chr1:161969956..161969963,-#_611af8cca94d81c65f4e60352314202d | p@chr1:161969956..161969963, - |
| 2.48e-30 | FFCP PHASE2:Hg19::chr19:18896512..18896527,-#_e7995015c6cd22cf58fa76001ad14040 | p@chr19:18896512..18896527, - |
| 2.48e-30 | FFCP PHASE1:Hg19::chr19:18896512..18896527,-#_e7995015c6cd22cf58fa76001ad14040 | p@chr19:18896512..18896527, - |
| 2.67e-30 | FFCP PHASE1:Hg19::chr5:79351765..79351792,+#_88a975bef8e0cbd06bae5843e1c7918d | p@chr5:79351765..79351792, + |
| 2.67e-30 | FFCP PHASE2:Hg19::chr5:79351765..79351792,+#_88a975bef8e0cbd06bae5843e1c7918d | p@chr5:79351765..79351792, + |
| 5.0e-30 | FFCP PHASE1:Hg19::chr20:48140767..48140776,-#_5c6f49b8a92d395449083339d1121d77 | p@chr20:48140767..48140776, - |
| 5.0e-30 | FFCP PHASE2:Hg19::chr20:48140767..48140776,-#_5c6f49b8a92d395449083339d1121d77 | p@chr20:48140767..48140776, - |
| 2.91e-29 | FFCP PHASE1:Hg19::chr19:18895812..18895830,-#_8fd4fb12b91514504cefefc7abcb53b0 | p@chr19:18895812..18895830, - |
| 2.91e-29 | FFCP PHASE2:Hg19::chr19:18895812..18895830,-#_8fd4fb12b91514504cefefc7abcb53b0 | p@chr19:18895812..18895830, - |
| 5.18e-29 | FFCP PHASE2:Hg19::chr15:81243109..81243120,+#_c308b86495a9208c18d93d59a61f54b4 | p@chr15:81243109..81243120, + |
| 5.18e-29 | FFCP PHASE1:Hg19::chr15:81243109..81243120,+#_c308b86495a9208c18d93d59a61f54b4 | p@chr15:81243109..81243120, + |
| 1.11e-28 | FFCP PHASE1:Hg19::chr19:18896642..18896656,-#_fcad8ddabc133819ba1776dee47d4c80 | p@chr19:18896642..18896656, - |
| 1.11e-28 | FFCP PHASE2:Hg19::chr19:18896642..18896656,-#_fcad8ddabc133819ba1776dee47d4c80 | p@chr19:18896642..18896656, - |
| 1.42e-28 | FFCP PHASE2:Hg19::chr1:56977818..56977827,-#_2d69cb6e2672316efc36353bf85b8a54 | p@chr1:56977818..56977827, - |
| 1.42e-28 | FFCP PHASE1:Hg19::chr1:56977818..56977827,-#_2d69cb6e2672316efc36353bf85b8a54 | p@chr1:56977818..56977827, - |
| 2.06e-28 | FFCP PHASE2:Hg19::chr17:38613300..38613311,-#_fe1eed6352f47b826d4e39d70cd3812f | p@chr17:38613300..38613311, - |
| 2.06e-28 | FFCP PHASE1:Hg19::chr17:38613300..38613311,-#_fe1eed6352f47b826d4e39d70cd3812f | p@chr17:38613300..38613311, - |
| 3.59e-28 | FFCP PHASE2:Hg19::chr1:203148495..203148505,-#_94ce55ce4de9b56b4d1d196cc1ddceb9 | p13@CHI3L1 |
| 3.59e-28 | FFCP PHASE2:Hg19::chr3:69154031..69154043,+#_94ce55ce4de9b56b4d1d196cc1ddceb9 | p@chr3:69154031..69154043, + |
| 3.59e-28 | FFCP PHASE1:Hg19::chr1:203148495..203148505,-#_94ce55ce4de9b56b4d1d196cc1ddceb9 | p13@CHI3L1 |
| 3.59e-28 | FFCP PHASE1:Hg19::chr3:69154031..69154043,+#_94ce55ce4de9b56b4d1d196cc1ddceb9 | p@chr3:69154031..69154043, + |
| 6.24e-28 | FFCP PHASE1:Hg19::chr8:57354275..57354292,-#_54c73441c6da2bd241eced7a1a6ed0f7 | p@chr8:57354275..57354292, - |
| 6.24e-28 | FFCP PHASE2:Hg19::chr8:57354275..57354292,-#_54c73441c6da2bd241eced7a1a6ed0f7 | p@chr8:57354275..57354292, - |
| 9.35e-28 | FFCP PHASE2:Hg19::chr4:26491909..26491918,-#_55ff8d7c8c5b7ebb9e74aad484d1e962 | p2@CCKAR |
| 9.35e-28 | FFCP PHASE1:Hg19::chr4:26491909..26491918,-#_55ff8d7c8c5b7ebb9e74aad484d1e962 | p2@CCKAR |
| 1.19e-27 | FFCP PHASE1:Hg19::chr3:86992689..86992700,-#_05b007a245db610c20539219f4c6afd3 | p@chr3:86992689..86992700, - |
| 1.19e-27 | FFCP PHASE2:Hg19::chr3:86992689..86992700,-#_05b007a245db610c20539219f4c6afd3 | p@chr3:86992689..86992700, - |
| 1.39e-27 | FFCP PHASE1:Hg19::chr21:39705323..39705334,-#_43c73e70b29b1a82a8f66764227ef09c | p2@ENST00000436845 |
| 1.39e-27 | FFCP PHASE2:Hg19::chr21:39705323..39705334,-#_43c73e70b29b1a82a8f66764227ef09c | p2@ENST00000436845 |
| 2.46e-27 | FFCP PHASE2:Hg19::chr19:18895892..18895911,-#_0e7b341c404f60834d23a7bd74959a01 | p@chr19:18895892..18895911, - |
| 2.46e-27 | FFCP PHASE1:Hg19::chr19:18895892..18895911,-#_0e7b341c404f60834d23a7bd74959a01 | p@chr19:18895892..18895911, - |
| 3.11e-27 | FFCP PHASE1:Hg19::chr3:29966392..29966406,+#_cfee021d193db391f0e847f28cb07acc | p22@RBMS3 |
| 3.11e-27 | FFCP PHASE2:Hg19::chr3:29966392..29966406,+#_cfee021d193db391f0e847f28cb07acc | p22@RBMS3 |
| 3.89e-27 | FFCP PHASE2:Hg19::chr1:203151934..203151947,-#_55e6541fe2df11299607f97b5e43d8c8 | p7@CHI3L1 |
| 3.89e-27 | FFCP PHASE1:Hg19::chr1:203151934..203151947,-#_55e6541fe2df11299607f97b5e43d8c8 | p7@CHI3L1 |
