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{{UBERON
{{UBERON
|id=UBERON:0008811
|alt_id=
|name=intromittent organ
|namespace=
|def="an external organ of a male organism that is specialized to deliver sperm during copulation. Intromittent organs are found most often in terrestrial species, as most aquatic species fertilize their eggs externally, although there are exceptions[WP]." [Wikipedia:Intromittent_organ]
|xref=AAO:0010255;;FBbt:00004850;;HAO:0000091;;TAO:0002036;;TGMA:0000585
|is_a=UBERON:0003135
|synonym="aedeagus" NARROW SENSU [FBbt:00004850]
|comment=this is a broad grouping class connecting a number of different analagous organs by their function. We place the insect aedeagus here rather than penis, although this is somewhat arbitrary given the broadness of the current definition
|comment=this is a broad grouping class connecting a number of different analagous organs by their function. We place the insect aedeagus here rather than penis, although this is somewhat arbitrary given the broadness of the current definition
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="an external organ of a male organism that is specialized to deliver sperm during copulation. Intromittent organs are found most often in terrestrial species, as most aquatic species fertilize their eggs externally, although there are exceptions[WP]." [Wikipedia:Intromittent_organ]
|subset=grouping_class;;organ_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0008811
|is_a=UBERON:0003135
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=intromittent organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000079
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]" xsd:string
|is_obsolete=
|subset=grouping_class;;organ_slim
|preceded_by=
|synonym="aedeagus" NARROW SENSU [FBbt:00004850]
|union_of=
|xref=AAO:0010255;;FBbt:00004850;;HAO:0000091;;TAO:0002036;;TGMA:0000585
}}
}}

Latest revision as of 18:03, 12 September 2014

Name:intromittent organ
Namespace:FANTOM
Definition:"an external organ of a male organism that is specialized to deliver sperm during copulation. Intromittent organs are found most often in terrestrial species, as most aquatic species fertilize their eggs externally, although there are exceptions[WP]." [Wikipedia:Intromittent_organ]
Xrefs:
links:

AAO:0010255
FBbt:00004850
HAO:0000091
TAO:0002036

TGMA:0000585
Synonyms: "aedeagus" NARROW SENSU [FBbt:00004850]
Comments:this is a broad grouping class connecting a number of different analagous organs by their function. We place the insect aedeagus here rather than penis, although this is somewhat arbitrary given the broadness of the current definition
Subset: grouping_class
organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003135(male reproductive organ)
part_of:UBERON:0000079(male reproductive system)



Children

is a:UBERON:0000989 (penis)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008811 (intromittent organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.37e-99FFCP PHASE1:Hg19::chr12:53068889..53068898,-#_c8b8384b7b0ade5ec19aa6751a31d007p@chr12:53068889..53068898, -
9.37e-99FFCP PHASE1:Hg19::chr12:53068923..53068932,-#_c8b8384b7b0ade5ec19aa6751a31d007p@chr12:53068923..53068932, -
9.37e-99FFCP PHASE2:Hg19::chr12:53068889..53068898,-#_c8b8384b7b0ade5ec19aa6751a31d007p@chr12:53068889..53068898, -
9.37e-99FFCP PHASE2:Hg19::chr12:53068923..53068932,-#_c8b8384b7b0ade5ec19aa6751a31d007p@chr12:53068923..53068932, -
2.55e-98FFCP PHASE1:Hg19::chr17:38975820..38975830,-#_e0ce0ba2fd765c2f968093cdb36d51b4p10@KRT10
2.55e-98FFCP PHASE2:Hg19::chr5:59672718..59672753,-#_e0ce0ba2fd765c2f968093cdb36d51b4p@chr5:59672718..59672753, -
2.55e-98FFCP PHASE2:Hg19::chr8:72252453..72252458,-#_e0ce0ba2fd765c2f968093cdb36d51b4p@chr8:72252453..72252458, -
2.55e-98FFCP PHASE1:Hg19::chr15:45803320..45803343,+#_e0ce0ba2fd765c2f968093cdb36d51b4p1@HMGN2P46
2.55e-98FFCP PHASE1:Hg19::chr9:79379348..79379360,+#_e0ce0ba2fd765c2f968093cdb36d51b4p1@PCA3
2.55e-98FFCP PHASE2:Hg19::chr17:38976407..38976413,-#_e0ce0ba2fd765c2f968093cdb36d51b4p20@KRT10
2.55e-98FFCP PHASE2:Hg19::chr6:110964453..110964459,-#_e0ce0ba2fd765c2f968093cdb36d51b4p16@CDK19
2.55e-98FFCP PHASE1:Hg19::chr16:15811123..15811133,+#_e0ce0ba2fd765c2f968093cdb36d51b4p@chr16:15811123..15811133, +
2.55e-98FFCP PHASE2:Hg19::chr17:38975820..38975830,-#_e0ce0ba2fd765c2f968093cdb36d51b4p10@KRT10
2.55e-98FFCP PHASE1:Hg19::chr5:59672718..59672753,-#_e0ce0ba2fd765c2f968093cdb36d51b4p@chr5:59672718..59672753, -
2.55e-98FFCP PHASE1:Hg19::chr8:72252453..72252458,-#_e0ce0ba2fd765c2f968093cdb36d51b4p@chr8:72252453..72252458, -
2.55e-98FFCP PHASE2:Hg19::chr15:45803320..45803343,+#_e0ce0ba2fd765c2f968093cdb36d51b4p1@HMGN2P46
2.55e-98FFCP PHASE2:Hg19::chr16:15811123..15811133,+#_e0ce0ba2fd765c2f968093cdb36d51b4p@chr16:15811123..15811133, +
2.55e-98FFCP PHASE1:Hg19::chr6:110964453..110964459,-#_e0ce0ba2fd765c2f968093cdb36d51b4p16@CDK19
2.55e-98FFCP PHASE2:Hg19::chr9:79379348..79379360,+#_e0ce0ba2fd765c2f968093cdb36d51b4p1@PCA3
2.55e-98FFCP PHASE1:Hg19::chr17:38976407..38976413,-#_e0ce0ba2fd765c2f968093cdb36d51b4p20@KRT10
1.23e-66FFCP PHASE1:Hg19::chr14:74454889..74454892,-#_6de9fca5e941a7ea619eb7373f70bbf1p10@ENTPD5
1.23e-66FFCP PHASE2:Hg19::chr12:53068552..53068579,-#_6de9fca5e941a7ea619eb7373f70bbf1p@chr12:53068552..53068579, -
1.23e-66FFCP PHASE2:Hg19::chr14:74454889..74454892,-#_6de9fca5e941a7ea619eb7373f70bbf1p10@ENTPD5
1.23e-66FFCP PHASE1:Hg19::chr12:53068552..53068579,-#_6de9fca5e941a7ea619eb7373f70bbf1p@chr12:53068552..53068579, -
2.39e-66FFCP PHASE2:Hg19::chr4:186434325..186434339,-#_4c886860569e24ea3def11291d5e3098p@chr4:186434325..186434339, -
2.39e-66FFCP PHASE2:Hg19::chr17:33640639..33640650,+#_4c886860569e24ea3def11291d5e3098p@chr17:33640639..33640650, +
2.39e-66FFCP PHASE2:Hg19::chr6:152585338..152585342,-#_4c886860569e24ea3def11291d5e3098p@chr6:152585338..152585342, -
2.39e-66FFCP PHASE2:Hg19::chr1:209545365..209545377,+#_4c886860569e24ea3def11291d5e3098p1@ENST00000447257
2.39e-66FFCP PHASE2:Hg19::chr19:38664309..38664322,+#_4c886860569e24ea3def11291d5e3098p@chr19:38664309..38664322, +
2.39e-66FFCP PHASE2:Hg19::chr2:179399981..179399988,-#_4c886860569e24ea3def11291d5e3098p@chr2:179399981..179399988, -
2.39e-66FFCP PHASE1:Hg19::chr17:38975850..38975854,-#_4c886860569e24ea3def11291d5e3098p19@KRT10
2.39e-66FFCP PHASE2:Hg19::chr17:38975796..38975805,-#_4c886860569e24ea3def11291d5e3098p13@KRT10
2.39e-66FFCP PHASE1:Hg19::chr1:61416169..61416181,-#_4c886860569e24ea3def11291d5e3098p@chr1:61416169..61416181, -
2.39e-66FFCP PHASE1:Hg19::chr17:38978526..38978535,+#_4c886860569e24ea3def11291d5e3098p@chr17:38978526..38978535, +
2.39e-66FFCP PHASE1:Hg19::chr19:51517928..51517936,-#_4c886860569e24ea3def11291d5e3098p2@AK026045
2.39e-66FFCP PHASE1:Hg19::chr4:186434325..186434339,-#_4c886860569e24ea3def11291d5e3098p@chr4:186434325..186434339, -
2.39e-66FFCP PHASE2:Hg19::chr2:179393635..179393640,-#_4c886860569e24ea3def11291d5e3098p167@TTN
2.39e-66FFCP PHASE2:Hg19::chr17:38976909..38976919,-#_4c886860569e24ea3def11291d5e3098p@chr17:38976909..38976919, -
2.39e-66FFCP PHASE1:Hg19::chr1:209545365..209545377,+#_4c886860569e24ea3def11291d5e3098p1@ENST00000447257
2.39e-66FFCP PHASE1:Hg19::chr17:33640639..33640650,+#_4c886860569e24ea3def11291d5e3098p@chr17:33640639..33640650, +
2.39e-66FFCP PHASE1:Hg19::chr6:152585338..152585342,-#_4c886860569e24ea3def11291d5e3098p@chr6:152585338..152585342, -
2.39e-66FFCP PHASE2:Hg19::chr17:38975850..38975854,-#_4c886860569e24ea3def11291d5e3098p19@KRT10
2.39e-66FFCP PHASE1:Hg19::chr19:38664309..38664322,+#_4c886860569e24ea3def11291d5e3098p@chr19:38664309..38664322, +
2.39e-66FFCP PHASE2:Hg19::chr17:38978526..38978535,+#_4c886860569e24ea3def11291d5e3098p@chr17:38978526..38978535, +
2.39e-66FFCP PHASE1:Hg19::chr2:179399981..179399988,-#_4c886860569e24ea3def11291d5e3098p@chr2:179399981..179399988, -
2.39e-66FFCP PHASE1:Hg19::chr17:38975796..38975805,-#_4c886860569e24ea3def11291d5e3098p13@KRT10
2.39e-66FFCP PHASE2:Hg19::chr1:61416169..61416181,-#_4c886860569e24ea3def11291d5e3098p@chr1:61416169..61416181, -
2.39e-66FFCP PHASE1:Hg19::chr2:179393635..179393640,-#_4c886860569e24ea3def11291d5e3098p167@TTN
2.39e-66FFCP PHASE2:Hg19::chr19:51517928..51517936,-#_4c886860569e24ea3def11291d5e3098p2@AK026045
2.39e-66FFCP PHASE1:Hg19::chr17:38976909..38976919,-#_4c886860569e24ea3def11291d5e3098p@chr17:38976909..38976919, -
4.66e-66FFCP PHASE1:Hg19::chr5:66771311..66771320,-#_850d745f552df24b6a34c98cb5ceae2ap2@ENST00000508512
4.66e-66FFCP PHASE2:Hg19::chr10:94301107..94301111,-#_850d745f552df24b6a34c98cb5ceae2ap18@IDE
4.66e-66FFCP PHASE1:Hg19::chr10:94301107..94301111,-#_850d745f552df24b6a34c98cb5ceae2ap18@IDE
4.66e-66FFCP PHASE2:Hg19::chr2:152520302..152520308,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:152520302..152520308, -
4.66e-66FFCP PHASE1:Hg19::chr13:103555720..103555725,+#_850d745f552df24b6a34c98cb5ceae2ap@chr13:103555720..103555725, +
4.66e-66FFCP PHASE2:Hg19::chr2:152520333..152520340,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:152520333..152520340, -
4.66e-66FFCP PHASE2:Hg19::chr2:152548420..152548425,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:152548420..152548425, -
4.66e-66FFCP PHASE2:Hg19::chr2:75869014..75869047,+#_850d745f552df24b6a34c98cb5ceae2ap@chr2:75869014..75869047, +
4.66e-66FFCP PHASE2:Hg19::chr3:52875783..52875812,-#_850d745f552df24b6a34c98cb5ceae2ap7@TMEM110
4.66e-66FFCP PHASE1:Hg19::chr2:75869014..75869047,+#_850d745f552df24b6a34c98cb5ceae2ap@chr2:75869014..75869047, +
4.66e-66FFCP PHASE1:Hg19::chr3:52875783..52875812,-#_850d745f552df24b6a34c98cb5ceae2ap7@TMEM110
4.66e-66FFCP PHASE2:Hg19::chr16:34571309..34571314,-#_850d745f552df24b6a34c98cb5ceae2ap@chr16:34571309..34571314, -
4.66e-66FFCP PHASE2:Hg19::chr5:66771311..66771320,-#_850d745f552df24b6a34c98cb5ceae2ap2@ENST00000508512
4.66e-66FFCP PHASE1:Hg19::chr2:152520302..152520308,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:152520302..152520308, -
4.66e-66FFCP PHASE1:Hg19::chr16:34571309..34571314,-#_850d745f552df24b6a34c98cb5ceae2ap@chr16:34571309..34571314, -
4.66e-66FFCP PHASE2:Hg19::chr13:103555720..103555725,+#_850d745f552df24b6a34c98cb5ceae2ap@chr13:103555720..103555725, +
4.66e-66FFCP PHASE2:Hg19::chr2:179542558..179542568,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:179542558..179542568, -
4.66e-66FFCP PHASE1:Hg19::chr2:179542558..179542568,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:179542558..179542568, -
4.66e-66FFCP PHASE1:Hg19::chr2:152520333..152520340,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:152520333..152520340, -
4.66e-66FFCP PHASE1:Hg19::chr2:152548420..152548425,-#_850d745f552df24b6a34c98cb5ceae2ap@chr2:152548420..152548425, -
1.46e-50FFCP PHASE2:Hg19::chr17:4448859..4448864,-#_ec666ebe896635405faa5a69db98388ap@chr17:4448859..4448864, -
1.46e-50FFCP PHASE2:Hg19::chr2:178753478..178753487,-#_ec666ebe896635405faa5a69db98388ap10@PDE11A
1.46e-50FFCP PHASE1:Hg19::chr17:4448859..4448864,-#_ec666ebe896635405faa5a69db98388ap@chr17:4448859..4448864, -
1.46e-50FFCP PHASE1:Hg19::chr2:178753478..178753487,-#_ec666ebe896635405faa5a69db98388ap10@PDE11A
2.42e-50FFCP PHASE1:Hg19::chr20:33451327..33451358,-#_1cc57ff685b34a61ded2eade21757b92p4@GGT7
2.42e-50FFCP PHASE1:Hg19::chr10:15646574..15646578,-#_1cc57ff685b34a61ded2eade21757b92p11@ITGA8
2.42e-50FFCP PHASE2:Hg19::chr10:71351909..71351911,+#_1cc57ff685b34a61ded2eade21757b92p@chr10:71351909..71351911, +
2.42e-50FFCP PHASE2:Hg19::chr17:10421962..10421969,-#_1cc57ff685b34a61ded2eade21757b92p2@MYH1
2.42e-50FFCP PHASE1:Hg19::chr10:71351909..71351911,+#_1cc57ff685b34a61ded2eade21757b92p@chr10:71351909..71351911, +
2.42e-50FFCP PHASE1:Hg19::chr2:152554090..152554096,-#_1cc57ff685b34a61ded2eade21757b92p@chr2:152554090..152554096, -
2.42e-50FFCP PHASE2:Hg19::chr2:170783857..170783860,+#_1cc57ff685b34a61ded2eade21757b92p@chr2:170783857..170783860, +
2.42e-50FFCP PHASE2:Hg19::chr16:56598984..56598990,+#_1cc57ff685b34a61ded2eade21757b92p1@MT4
2.42e-50FFCP PHASE2:Hg19::chr20:33451327..33451358,-#_1cc57ff685b34a61ded2eade21757b92p4@GGT7
2.42e-50FFCP PHASE1:Hg19::chr16:56598984..56598990,+#_1cc57ff685b34a61ded2eade21757b92p1@MT4
2.42e-50FFCP PHASE1:Hg19::chr17:10421962..10421969,-#_1cc57ff685b34a61ded2eade21757b92p2@MYH1
2.42e-50FFCP PHASE2:Hg19::chr10:15646574..15646578,-#_1cc57ff685b34a61ded2eade21757b92p11@ITGA8
2.42e-50FFCP PHASE1:Hg19::chr2:170783857..170783860,+#_1cc57ff685b34a61ded2eade21757b92p@chr2:170783857..170783860, +
2.42e-50FFCP PHASE2:Hg19::chr2:152554090..152554096,-#_1cc57ff685b34a61ded2eade21757b92p@chr2:152554090..152554096, -
3.99e-50FFCP PHASE2:Hg19::chr2:179399074..179399079,-#_73b48801f5a2f23e775834f0257abf14p@chr2:179399074..179399079, -
3.99e-50FFCP PHASE2:Hg19::chr5:38484957..38484965,-#_73b48801f5a2f23e775834f0257abf14p@chr5:38484957..38484965, -
3.99e-50FFCP PHASE1:Hg19::chr2:152534162..152534168,-#_73b48801f5a2f23e775834f0257abf14p@chr2:152534162..152534168, -
3.99e-50FFCP PHASE2:Hg19::chr6:56362490..56362515,-#_73b48801f5a2f23e775834f0257abf14p60@DST
3.99e-50FFCP PHASE2:Hg19::chr6:2744431..2744440,-#_73b48801f5a2f23e775834f0257abf14p@chr6:2744431..2744440, -
3.99e-50FFCP PHASE1:Hg19::chr5:66771335..66771342,-#_73b48801f5a2f23e775834f0257abf14p3@ENST00000508512
3.99e-50FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_73b48801f5a2f23e775834f0257abf14p@chr17:38976882..38976895, -
3.99e-50FFCP PHASE2:Hg19::chr16:15865517..15865522,-#_73b48801f5a2f23e775834f0257abf14p@chr16:15865517..15865522, -
3.99e-50FFCP PHASE1:Hg19::chr2:152409955..152409964,-#_73b48801f5a2f23e775834f0257abf14p@chr2:152409955..152409964, -
3.99e-50FFCP PHASE2:Hg19::chr5:66771414..66771419,-#_73b48801f5a2f23e775834f0257abf14p2@ENST00000515184
3.99e-50FFCP PHASE2:Hg19::chr2:152393727..152393736,-#_73b48801f5a2f23e775834f0257abf14p@chr2:152393727..152393736, -
3.99e-50FFCP PHASE1:Hg19::chr1:152483278..152483280,+#_73b48801f5a2f23e775834f0257abf14p1@LCE5A










Property "Property value" (as page type) with input value "UBPROP:0000001 "Surface structure that is an external structure of a male organism through which sperm is transferred to a female organism during mating.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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