FF:461-43C1: Difference between revisions
From FANTOM5_SSTAR
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr19:45225149..45225186,+!p1@Tlx1!2.06!113.93!Tlx1;;chr10:22539932..22539956,-!p1@Tcf21!1.95!225.99!Tcf21;;chr5:42155788..42155800,-!p1@Nkx3-2!1.88!74.71!Nkx3-2;;chr17:26978409..26978442,-!p1@Nkx2-5!1.78!59.65!Nkx2-5;;chr17:26978521..26978536,-!p2@Nkx2-5!1.72!52.01!Nkx2-5;;chr2:164228702..164228719,+!p1@Rbpjl!1.67!45.61!Rbpjl;;chr2:104966766..104966786,+!p1@Wt1!1.51!49.12!Wt1;;chr19:43686789..43686811,+!p1@Nkx2-3!1.44!26.42!Nkx2-3;;chr8:87425854..87425891,+!p1@Klf1!1.43!25.80!Klf1;;chr19:45225276..45225304,+!p2@Tlx1!1.34!20.64!Tlx1;;chr2:19367259..19367278,+!p1@Ptf1a!1.27!17.54!Ptf1a;;chr2:104966874..104966907,+!p2@Wt1!1.23!16.10!Wt1;;chr7:17647736..17647772,-!p1@Hif3a!1.20!51.80!Hif3a;;chr15:103085660..103085681,-!p1@Nfe2!1.17!20.64!Nfe2;;chr1:140739014..140739032,-!p1@Lhx9!1.15!16.51!Lhx9;;chr2:104966933..104966966,+!p3@Wt1!1.15!13.21!Wt1;;chr2:28477452..28477483,-!p1@Gfi1b!1.14!15.69!Gfi1b;;chr11:11584970..11585030,+!p2@Ikzf1!1.09!16.30!Ikzf1;;chrX:7544943..7545001,-!p1@Gata1!1.05!10.11!Gata1;;chr2:38567715..38567730,-!p2@Nr5a1!1.04!9.91!Nr5a1;;chr5:144951153..144951203,+!p1@Bhlha15!1.03!14.24!Bhlha15;;chr6:88143711..88143717,+!p2@Gata2!1.00!14.65!Gata2;;chr13:48758276..48758291,+!p1@Barx1!0.98!8.46!Barx1;;chr8:59799772..59799789,+!p1@Hand2!0.97!24.35!Hand2;;chr2:104966662..104966673,+!p4@Wt1!0.95!7.84!Wt1;;chr10:12810631..12810649,+!p1@Plagl1!0.89!186.16!Plagl1;;chr10:88145766..88145770,-!p1@Spic!0.89!9.08!Spic;;chr13:48758358..48758415,+!p2@Barx1!0.87!6.40!Barx1;;chr8:123608252..123608268,+!p1@Foxf1a!0.86!9.49!Foxf1a;;chr8:90483433..90483457,-!p2@Zfp423!0.86!8.67!Zfp423;;chr2:90936901..90936945,+!p1@Sfpi1!0.85!34.26!Sfpi1;;chr8:87225329..87225396,+!p1@Lyl1!0.85!24.35!Lyl1;;chr15:103085802..103085817,-!p4@Nfe2!0.85!7.64!Nfe2;;chr11:11586218..11586285,+!p1@Ikzf1!0.84!19.81!Ikzf1;;chr17:26978449..26978458,-!p3@Nkx2-5!0.83!5.78!Nkx2-5;;chr5:42155732..42155733,-!p3@Nkx3-2!0.80!5.37!Nkx3-2;;chr12:36219645..36219730,-!p1@Ahr!0.79!55.11!Ahr;;chr4:114732112..114732158,+!p1@Tal1!0.79!11.97!Tal1;;chr14:22807107..22807119,-!p2@Zfp503!0.78!23.73!Zfp503;;chr9:96159147..96159204,+!p2@Tfdp2!0.78!9.91!Tfdp2;;chr4:63064364..63064384,-!p1@Akna!0.77!15.48!Akna;;chr2:90936947..90936977,+!p2@Sfpi1!0.77!10.11!Sfpi1;;chr7:77505617..77505632,-!p1@Nr2f2!0.76!245.39!Nr2f2;;chr2:167363692..167363710,+!p1@Snai1!0.74!60.88!Snai1;;chr7:77511403..77511450,-!p3@Nr2f2!0.74!10.11!Nr2f2;;chr2:90922554..90922575,+!p4@Sfpi1!0.74!8.67!Sfpi1;;chr14:22807216..22807231,-!p3@Zfp503!0.74!8.05!Zfp503;;chr17:26978464..26978469,-!p4@Nkx2-5!0.74!4.54!Nkx2-5;;chr14:22807083..22807104,-!p1@Zfp503!0.73!85.86!Zfp503;;chr16:92826249..92826325,-!p1@Runx1!0.71!10.94!Runx1;;chr15:103082088..103082136,-!p2@Nfe2!0.71!4.13!Nfe2;;chr11:18918917..18918944,-!p1@Meis1!0.70!59.03!Meis1;;chr6:29476690..29476724,+!p1@Irf5!0.70!20.64!Irf5;;chr8:87225670..87225697,+!p2@Lyl1!0.70!13.00!Lyl1;;chr11:18918820..18918831,-!p4@Meis1!0.70!8.26!Meis1;;chr11:96153767..96153822,+!p1@Hoxb6!0.70!6.60!Hoxb6;;chr12:3891810..3891829,+!p2@Dnmt3a!0.70!6.60!Dnmt3a;;chr6:88148650..88148669,+!p1@Gata2!0.69!36.94!Gata2;;chr7:77511234..77511302,-!p2@Nr2f2!0.68!28.69!Nr2f2;;chrX:45245679..45245702,-!p1@Smarca1!0.68!19.19!Smarca1;;chr4:87452200..87452229,-!p2@Mllt3!0.67!8.67!Mllt3;;chr11:18918434..18918489,-!p3@Meis1!0.67!6.19!Meis1;;chr5:42155277..42155281,-!p2@Nkx3-2!0.67!3.71!Nkx3-2;;chr7:17642177..17642223,-!p3@Hif3a!0.67!3.71!Hif3a;;chr7:17642053..17642066,-!p2@Hif3a!0.66!5.37!Hif3a;;chr19:59533221..59533271,+!p1@Emx2!0.66!4.54!Emx2;;chr9:51021788..51021802,+!p1@Pou2af1!0.66!4.33!Pou2af1;;chr15:103085690..103085710,-!p3@Nfe2!0.66!3.92!Nfe2;;chr19:10315179..10315241,-!p1@Gm98!0.65!42.10!Gm98;;chr10:119913278..119913298,-!p2@Hmga2!0.65!8.67!Hmga2;;chr7:89137163..89137200,-!p1@Bnc1!0.65!4.33!Bnc1;;chr7:122989632..122989668,-!p2@Sox6!0.65!3.51!Sox6;;chrX:98449898..98449913,+!p2@Foxo4!0.63!11.97!Foxo4;;chr10:119913546..119913583,-!p3@Hmga2!0.63!7.64!Hmga2;;chr5:77543897..77543911,-!p2@Hopx!0.63!6.81!Hopx;;chr2:104966465..104966479,+!p6@Wt1!0.63!3.30!Wt1;;chr16:14705925..14705951,+!p1@Snai2!0.62!26.62!Snai2;;chr18:55150011..55150059,-!p3@Zfp608!0.62!11.76!Zfp608;;chr7:87170879..87170914,+!p2@Zfp710!0.62!8.26!Zfp710;;chr2:30700788..30700824,+!p2@Prrx2!0.62!5.16!Prrx2;;chr7:52471143..52471186,+!p1@Tead2!0.61!39.01!Tead2;;chr2:169458519..169458555,+!p2@Tshz2!0.61!14.45!Tshz2;;chr18:76219118..76219155,+!p1@Zbtb7c!0.61!5.99!Zbtb7c;;chr4:154010228..154010244,-!p4@Prdm16!0.61!4.54!Prdm16;;chr7:77511622..77511657,-!p5@Nr2f2!0.61!4.13!Nr2f2;;chr2:104966436..104966455,+!p7@Wt1!0.61!3.10!Wt1;;chr4:97444012..97444045,+!p4@Nfia!0.60!26.83!Nfia;;chr19:37509324..37509337,+!p1@Hhex!0.60!25.18!Hhex;;chr6:52154414..52154462,-!p1@Hoxa5!0.60!4.33!Hoxa5;;chr7:17642018..17642045,-!p4@Hif3a!0.60!3.51!Hif3a;;chr10:30562571..30562597,-!p1@Hey2!0.59!7.84!Hey2;;chr8:87225702..87225726,+!p3@Lyl1!0.59!6.60!Lyl1;;chr11:18918406..18918431,-!p6@Meis1!0.59!4.13!Meis1;;chr10:61595830..61595846,+!p1@Neurog3!0.59!2.89!Neurog3;;chr19:43686882..43686906,+!p2@Nkx2-3!0.59!2.89!Nkx2-3;;chr2:105003277..105003280,+!p5@Wt1!0.59!2.89!Wt1;;chr9:32503590..32503680,+!p1@Ets1!0.58!127.55!Ets1;;chr11:16908650..16908690,-!p1@Plek!0.58!20.85!Plek;;chr4:3865501..3865548,-!p1@Plag1!0.58!17.34!Plag1;;chr2:90936978..90937023,+!p3@Sfpi1!0.58!5.99!Sfpi1;;chr13:55932591..55932622,-!p1@Pitx1!0.58!3.51!Pitx1;;chr5:138187341..138187406,+!p3@Tsc22d4!0.57!35.91!Tsc22d4;;chr7:6649134..6649167,-!p1@Zim1!0.57!17.75!Zim1;;chr4:6917606..6917681,-!p1@Tox!0.57!13.62!Tox;;chr8:90483459..90483475,-!p1@Zfp423!0.57!8.67!Zfp423;;chr17:28487603..28487626,-!p2@Tead3!0.57!6.60!Tead3;;chr14:22806778..22806795,-!p5@Zfp503!0.57!3.10!Zfp503;;chr2:163332558..163332596,+!p2@Hnf4a!0.57!2.68!Hnf4a;;chr9:74709695..74709722,+!p1@Onecut1!0.57!2.68!Onecut1;;chr14:64562503..64562524,+!p1@Sox7!0.56!18.78!Sox7;;chr6:52163319..52163342,-!p1@Hoxa3!0.56!4.13!Hoxa3;;chr4:135728181..135728203,+!p2@E2f2!0.56!3.71!E2f2;;chr7:77511311..77511352,-!p4@Nr2f2!0.55!5.99!Nr2f2;;chr7:19608891..19608895,-!p1@Foxa3!0.55!3.51!Foxa3;;chr9:96159225..96159249,+!p5@Tfdp2!0.55!2.89!Tfdp2;;chr2:44968512..44968530,-!p1@Zeb2!0.54!68.73!Zeb2;;chr10:119913310..119913366,-!p1@Hmga2!0.54!24.35!Hmga2;;chr8:123260252..123260264,+!p1@Irf8!0.54!21.67!Irf8;;chr4:97444537..97444555,+!p8@Nfia!0.54!7.22!Nfia;;chr4:135129538..135129558,-!p1@Grhl3!0.54!4.13!Grhl3;;chr7:37483231..37483263,+!p2@Tshz3!0.54!4.13!Tshz3;;chr15:102865088..102865107,+!p1@Hoxc4!0.54!3.51!Hoxc4;;chr15:102844431..102844445,+!p1@Hoxc5!0.54!2.48!Hoxc5;;chr4:44723559..44723593,-!p1@Pax5!0.54!2.48!Pax5;;chr7:122989594..122989626,-!p1@Sox6!0.54!2.48!Sox6;;chr2:169458192..169458247,+!p1@Tshz2!0.53!26.83!Tshz2;;chr2:162880327..162880385,+!p2@Mybl2!0.53!20.02!Mybl2;;chr4:62626594..62626651,+!p1@Zfp618!0.53!11.14!Zfp618;;chr6:15135456..15135520,+!p3@Foxp2!0.53!5.99!Foxp2;;chr2:92886587..92886622,-!p3@Prdm11!0.53!3.92!Prdm11;;chr11:96143666..96143725,+!p1@Hoxb8!0.53!2.89!Hoxb8;;chr11:18918959..18918976,-!p2@Meis1!0.52!40.45!Meis1;;chr6:72739185..72739232,-!p1@Tcf7l1!0.52!30.96!Tcf7l1;;chr19:28754692..28754757,-!p1@Glis3!0.51!11.56!Glis3;;chrX:45245644..45245666,-!p2@Smarca1!0.51!8.87!Smarca1;;chr10:119914001..119914078,-!p4@Hmga2!0.51!3.30!Hmga2;;chr11:52096066..52096081,-!p2@Tcf7!0.51!2.89!Tcf7;;chr2:147871627..147871641,-!p1@Foxa2!0.51!2.27!Foxa2;;chr2:152223441..152223465,-!p2@Sox12!0.50!11.35!Sox12;;chr2:91864300..91864379,-!p2@Creb3l1!0.50!7.64!Creb3l1;;chr3:135271185..135271254,-!p4@Nfkb1!0.50!4.54!Nfkb1;;chr11:70043257..70043263,-!p1@Bcl6b!0.50!4.33!Bcl6b;;chr13:48356475..48356492,+!p1@Id4!0.49!60.47!Id4;;chr19:26822880..26822964,+!p2@Smarca2!0.49!23.32!Smarca2;;chr1:4483679..4483695,-!p1@Sox17!0.49!12.59!Sox17;;chr15:102865131..102865151,+!p2@Hoxc4!0.49!2.48!Hoxc4;;chr2:44968775..44968795,-!p4@Zeb2!0.48!12.38!Zeb2;;chr4:154010918..154010931,-!p1@Prdm16!0.48!7.43!Prdm16;;chr14:52935788..52935817,-!p2@Sall2!0.48!5.37!Sall2;;chr2:181406327..181406350,-!p1@Sox18!0.47!82.76!Sox18;;chr12:87027598..87027652,+!p1@Batf!0.47!5.57!Batf;;chr10:20880731..20880775,-!p2@Myb!0.47!4.95!Myb;;chr14:56443806..56443848,+!p1@Nfatc4!0.47!4.75!Nfatc4;;chr2:169458799..169458832,+!p5@Tshz2!0.47!3.71!Tshz2;;chr2:90922519..90922544,+!p6@Sfpi1!0.47!2.27!Sfpi1;;chr13:99954640..99954681,+!p1@Zfp366!0.46!8.87!Zfp366;;chr1:186556410..186556424,-!p1@Hlx!0.46!7.64!Hlx;;chr11:98821937..98821987,+!p4@Rara!0.46!5.16!Rara;;chr18:75979866..75979890,+!p3@Zbtb7c!0.46!4.75!Zbtb7c;;chr11:11585678..11585745,+!p5@Ikzf1!0.46!3.10!Ikzf1;;chr6:30908793..30908815,-!p1@Klf14!0.46!1.86!Klf14;;chr10:92773591..92773623,-!p1@Elk3!0.45!57.17!Elk3;;chr12:9581262..9581282,+!p1@Osr1!0.45!30.13!Osr1;;chr2:152223469..152223512,-!p1@Sox12!0.45!12.80!Sox12;;chr2:92886297..92886329,-!p1@Prdm11!0.45!11.35!Prdm11;;chr6:99216488..99216534,-!p2@Foxp1!0.45!6.60!Foxp1;;chr1:120950098..120950132,-!p2@Gli2!0.45!5.16!Gli2;;chr2:153475178..153475196,+!p1@Dnmt3b!0.45!4.75!Dnmt3b;;chr2:27532479..27532509,+!p3@Rxra!0.45!4.54!Rxra;;chr12:3891753..3891801,+!p4@Dnmt3a!0.45!3.51!Dnmt3a;;chr6:16848347..16848391,-!p1@Tfec!0.45!2.68!Tfec;;chr2:91864661..91864686,-!p1@Creb3l1!0.44!54.69!Creb3l1;;chrX:45807329..45807370,-!p1@Elf4!0.44!17.13!Elf4;;chr12:28027561..28027591,-!p1@Sox11!0.44!15.89!Sox11;;chr11:98821749..98821799,+!p2@Rara!0.44!15.07!Rara;;chr15:102301130..102301147,+!p3@Pcbp2!0.44!7.02!Pcbp2;;chr7:37483021..37483078,+!p1@Tshz3!0.44!7.02!Tshz3;;chr2:169458352..169458397,+!p3@Tshz2!0.44!5.57!Tshz2;;chr10:126778916..126778974,-!p1@Gli1!0.44!4.95!Gli1;;chr6:52154386..52154407,-!p2@Hoxa5!0.44!2.48!Hoxa5;;chr1:14746065..14746079,-!p1@Msc!0.44!2.27!Msc;;chr8:118231678..118231692,-!p2@Maf!0.43!21.46!Maf;;chr18:69681439..69681456,+!p7@Tcf4!0.43!5.57!Tcf4;;chr4:87452180..87452196,-!p3@Mllt3!0.43!4.13!Mllt3;;chr11:120491440..120491474,-!p3@Mafg!0.43!2.89!Mafg;;chr17:37139472..37139514,+!p1@Zfp57!0.42!15.69!Zfp57;;chr10:79389784..79389833,+!p1@Arid3a!0.42!12.18!Arid3a;;chr17:35031460..35031518,+!p1@Zbtb12!0.42!1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!0.15!0.41!Hmga2;;chr11:100721732..100721742,+!p3@Stat5a!0.15!0.41!Stat5a;;chr11:11590117..11590138,+!p4@Ikzf1!0.15!0.41!Ikzf1;;chr11:96132767..96132796,+!p2@Hoxb9!0.15!0.41!Hoxb9;;chr10:5734677..5734702,-!p4@Esr1!0.15!0.41!Esr1;;chr17:86087592..86087615,-!p1@Six2!0.15!0.41!Six2;;chr16:92826338..92826347,-!p6@Runx1!0.15!0.41!Runx1;;chr18:11052516..11052525,+!p5@Gata6!0.15!0.41!Gata6;;chr19:46222859..46222876,-!p1@Pitx3!0.15!0.41!Pitx3;;chr17:37139555..37139562,+!p6@Zfp57!0.15!0.41!Zfp57;;chr16:94085471..94085495,+!p1@Sim2!0.15!0.41!Sim2;;chr19:37511197..37511206,+!p3@Hhex!0.15!0.41!Hhex;;chr17:35031631..35031645,+!p5@Zbtb12!0.15!0.41!Zbtb12;;chr4:114732159..114732166,+!p6@Tal1!0.15!0.41!Tal1;;chr4:97444557..97444558,+!p23@Nfia!0.15!0.41!Nfia;;chr4:84321280..84321298,-!p5@Bnc2!0.15!0.41!Bnc2;;chr2:9800094..9800108,-!p3@Gata3!0.15!0.41!Gata3;;chr2:74536026..74536039,+!p1@Hoxd9!0.15!0.41!Hoxd9;;chr4:108132386..108132400,+!p14@Zcchc11!0.15!0.41!Zcchc11;;chr4:114730015..114730042,+!p7@Tal1!0.15!0.41!Tal1;;chr4:135736707..135736724,+!p8@E2f2!0.15!0.41!E2f2;;chr4:114730288..114730306,+!p8@Tal1!0.15!0.41!Tal1;;chr3:128918394..128918413,+!p5@Pitx2!0.15!0.41!Pitx2;;chr3:58219238..58219246,+!p3@Tsc22d2!0.15!0.41!Tsc22d2;;chr4:97444086..97444093,+!p24@Nfia!0.15!0.41!Nfia;;chr2:81893447..81893468,+!p2@Zfp804a!0.15!0.41!Zfp804a;;chr2:90936867..90936874,+!p7@Sfpi1!0.15!0.41!Sfpi1;;chr2:81893535..81893548,+!p1@Zfp804a!0.15!0.41!Zfp804a;;chr4:154010882..154010889,-!p10@Prdm16!0.15!0.41!Prdm16;;chr3:29911808..29911833,-!p8@Mecom!0.15!0.41!Mecom;;chr4:87452167..87452178,-!p8@Mllt3!0.15!0.41!Mllt3;;chr5:102094214..102094230,-!p1@Nkx6-1!0.15!0.41!Nkx6-1;;chr3:29911926..29911942,-!p13@Mecom!0.15!0.41!Mecom;;chr19:59532915..59532940,+!p5@Emx2!0.15!0.41!Emx2;;chr2:17976830..17976848,+!p12@Mllt10!0.15!0.41!Mllt10;;chr1:169528823..169528860,+!p5@Rxrg!0.15!0.41!Rxrg;;chr1:64579145..64579168,+!p6@Creb1!0.15!0.41!Creb1;;chr2:103264213..103264233,+!p1@Elf5!0.15!0.41!Elf5;;chr19:59533595..59533628,+!p6@Emx2!0.15!0.41!Emx2;;chr2:166868994..166869023,-!p7@Znfx1!0.15!0.41!Znfx1;;chr2:103123925..103123959,-!p3@Ehf!0.15!0.41!Ehf;;chr19:59534008..59534046,+!p7@Emx2!0.15!0.41!Emx2;;chr2:30700830..30700843,+!p4@Prrx2!0.15!0.41!Prrx2;;chr1:138857048..138857071,-!p2@Nr5a2!0.15!0.41!Nr5a2;;chr1:167865149..167865167,-!p3@Pou2f1!0.15!0.41!Pou2f1;;chr2:115891770..115891799,-!p25@Meis2!0.15!0.41!Meis2;;chr19:55969923..55969944,+!p6@Tcf7l2!0.15!0.41!Tcf7l2;;chr1:140739042..140739054,-!p2@Lhx9!0.15!0.41!Lhx9;;chr2:147872790..147872821,-!p2@Foxa2!0.15!0.41!Foxa2;;chr2:28477422..28477433,-!p2@Gfi1b!0.15!0.41!Gfi1b;;chr8:74842952..74842970,+!p1@Klf2!0.14!84.41!Klf2;;chr8:107821563..107821642,+!p1@E2f4!0.14!35.09!E2f4;;chr5:138558139..138558214,+!p1@Zscan21!0.14!33.64!Zscan21;;chr18:14131126..14131211,-!p1@Zfp521!0.14!25.59!Zfp521;;chr16:50432467..50432522,-!p1@Bbx!0.14!24.15!Bbx;;chr6:29997979..29998049,+!p1@Nrf1!0.14!22.50!Nrf1;;chr9:63605740..63605771,-!p1@Smad3!0.14!17.54!Smad3;;chr12:77471524..77471607,+!p1@Zbtb1!0.14!15.48!Zbtb1;;chr11:59319701..59319741,-!p1@Zkscan17!0.14!13.83!Zkscan17;;chr8:108939219..108939296,+!p1@Zfp90!0.14!12.59!Zfp90;;chr10:20032304..20032324,+!p2@Bclaf1!0.14!11.14!Bclaf1;;chr11:65620712..65620729,+!p1@Zkscan6!0.14!9.70!Zkscan6;;chr2:126501197..126501245,-!p1@Gabpb1!0.14!8.87!Gabpb1;;chr2:169956656..169956684,-!p1@Zfp217!0.14!7.64!Zfp217;;chr7:30906934..30907020,+!p1@Zfp382!0.14!7.64!Zfp382;;chr18:75527030..75527055,+!p2@Smad7!0.14!7.02!Smad7;;chr10:62328186..62328219,-!p1@Tet1!0.14!6.81!Tet1;;chr8:72520162..72520197,-!p4@Gatad2a!0.14!5.78!Gatad2a;;chr3:135354289..135354334,-!p3@Nfkb1!0.14!5.57!Nfkb1;;chr6:65728988..65729056,+!p1@Prdm5!0.14!5.37!Prdm5;; | |expression_enrichment_score=chr19:45225149..45225186,+!p1@Tlx1!2.06!113.93!Tlx1;;chr10:22539932..22539956,-!p1@Tcf21!1.95!225.99!Tcf21;;chr5:42155788..42155800,-!p1@Nkx3-2!1.88!74.71!Nkx3-2;;chr17:26978409..26978442,-!p1@Nkx2-5!1.78!59.65!Nkx2-5;;chr17:26978521..26978536,-!p2@Nkx2-5!1.72!52.01!Nkx2-5;;chr2:164228702..164228719,+!p1@Rbpjl!1.67!45.61!Rbpjl;;chr2:104966766..104966786,+!p1@Wt1!1.51!49.12!Wt1;;chr19:43686789..43686811,+!p1@Nkx2-3!1.44!26.42!Nkx2-3;;chr8:87425854..87425891,+!p1@Klf1!1.43!25.80!Klf1;;chr19:45225276..45225304,+!p2@Tlx1!1.34!20.64!Tlx1;;chr2:19367259..19367278,+!p1@Ptf1a!1.27!17.54!Ptf1a;;chr2:104966874..104966907,+!p2@Wt1!1.23!16.10!Wt1;;chr7:17647736..17647772,-!p1@Hif3a!1.20!51.80!Hif3a;;chr15:103085660..103085681,-!p1@Nfe2!1.17!20.64!Nfe2;;chr1:140739014..140739032,-!p1@Lhx9!1.15!16.51!Lhx9;;chr2:104966933..104966966,+!p3@Wt1!1.15!13.21!Wt1;;chr2:28477452..28477483,-!p1@Gfi1b!1.14!15.69!Gfi1b;;chr11:11584970..11585030,+!p2@Ikzf1!1.09!16.30!Ikzf1;;chrX:7544943..7545001,-!p1@Gata1!1.05!10.11!Gata1;;chr2:38567715..38567730,-!p2@Nr5a1!1.04!9.91!Nr5a1;;chr5:144951153..144951203,+!p1@Bhlha15!1.03!14.24!Bhlha15;;chr6:88143711..88143717,+!p2@Gata2!1.00!14.65!Gata2;;chr13:48758276..48758291,+!p1@Barx1!0.98!8.46!Barx1;;chr8:59799772..59799789,+!p1@Hand2!0.97!24.35!Hand2;;chr2:104966662..104966673,+!p4@Wt1!0.95!7.84!Wt1;;chr10:12810631..12810649,+!p1@Plagl1!0.89!186.16!Plagl1;;chr10:88145766..88145770,-!p1@Spic!0.89!9.08!Spic;;chr13:48758358..48758415,+!p2@Barx1!0.87!6.40!Barx1;;chr8:123608252..123608268,+!p1@Foxf1a!0.86!9.49!Foxf1a;;chr8:90483433..90483457,-!p2@Zfp423!0.86!8.67!Zfp423;;chr2:90936901..90936945,+!p1@Sfpi1!0.85!34.26!Sfpi1;;chr8:87225329..87225396,+!p1@Lyl1!0.85!24.35!Lyl1;;chr15:103085802..103085817,-!p4@Nfe2!0.85!7.64!Nfe2;;chr11:11586218..11586285,+!p1@Ikzf1!0.84!19.81!Ikzf1;;chr17:26978449..26978458,-!p3@Nkx2-5!0.83!5.78!Nkx2-5;;chr5:42155732..42155733,-!p3@Nkx3-2!0.80!5.37!Nkx3-2;;chr12:36219645..36219730,-!p1@Ahr!0.79!55.11!Ahr;;chr4:114732112..114732158,+!p1@Tal1!0.79!11.97!Tal1;;chr14:22807107..22807119,-!p2@Zfp503!0.78!23.73!Zfp503;;chr9:96159147..96159204,+!p2@Tfdp2!0.78!9.91!Tfdp2;;chr4:63064364..63064384,-!p1@Akna!0.77!15.48!Akna;;chr2:90936947..90936977,+!p2@Sfpi1!0.77!10.11!Sfpi1;;chr7:77505617..77505632,-!p1@Nr2f2!0.76!245.39!Nr2f2;;chr2:167363692..167363710,+!p1@Snai1!0.74!60.88!Snai1;;chr7:77511403..77511450,-!p3@Nr2f2!0.74!10.11!Nr2f2;;chr2:90922554..90922575,+!p4@Sfpi1!0.74!8.67!Sfpi1;;chr14:22807216..22807231,-!p3@Zfp503!0.74!8.05!Zfp503;;chr17:26978464..26978469,-!p4@Nkx2-5!0.74!4.54!Nkx2-5;;chr14:22807083..22807104,-!p1@Zfp503!0.73!85.86!Zfp503;;chr16:92826249..92826325,-!p1@Runx1!0.71!10.94!Runx1;;chr15:103082088..103082136,-!p2@Nfe2!0.71!4.13!Nfe2;;chr11:18918917..18918944,-!p1@Meis1!0.70!59.03!Meis1;;chr6:29476690..29476724,+!p1@Irf5!0.70!20.64!Irf5;;chr8:87225670..87225697,+!p2@Lyl1!0.70!13.00!Lyl1;;chr11:18918820..18918831,-!p4@Meis1!0.70!8.26!Meis1;;chr11:96153767..96153822,+!p1@Hoxb6!0.70!6.60!Hoxb6;;chr12:3891810..3891829,+!p2@Dnmt3a!0.70!6.60!Dnmt3a;;chr6:88148650..88148669,+!p1@Gata2!0.69!36.94!Gata2;;chr7:77511234..77511302,-!p2@Nr2f2!0.68!28.69!Nr2f2;;chrX:45245679..45245702,-!p1@Smarca1!0.68!19.19!Smarca1;;chr4:87452200..87452229,-!p2@Mllt3!0.67!8.67!Mllt3;;chr11:18918434..18918489,-!p3@Meis1!0.67!6.19!Meis1;;chr5:42155277..42155281,-!p2@Nkx3-2!0.67!3.71!Nkx3-2;;chr7:17642177..17642223,-!p3@Hif3a!0.67!3.71!Hif3a;;chr7:17642053..17642066,-!p2@Hif3a!0.66!5.37!Hif3a;;chr19:59533221..59533271,+!p1@Emx2!0.66!4.54!Emx2;;chr9:51021788..51021802,+!p1@Pou2af1!0.66!4.33!Pou2af1;;chr15:103085690..103085710,-!p3@Nfe2!0.66!3.92!Nfe2;;chr19:10315179..10315241,-!p1@Gm98!0.65!42.10!Gm98;;chr10:119913278..119913298,-!p2@Hmga2!0.65!8.67!Hmga2;;chr7:89137163..89137200,-!p1@Bnc1!0.65!4.33!Bnc1;;chr7:122989632..122989668,-!p2@Sox6!0.65!3.51!Sox6;;chrX:98449898..98449913,+!p2@Foxo4!0.63!11.97!Foxo4;;chr10:119913546..119913583,-!p3@Hmga2!0.63!7.64!Hmga2;;chr5:77543897..77543911,-!p2@Hopx!0.63!6.81!Hopx;;chr2:104966465..104966479,+!p6@Wt1!0.63!3.30!Wt1;;chr16:14705925..14705951,+!p1@Snai2!0.62!26.62!Snai2;;chr18:55150011..55150059,-!p3@Zfp608!0.62!11.76!Zfp608;;chr7:87170879..87170914,+!p2@Zfp710!0.62!8.26!Zfp710;;chr2:30700788..30700824,+!p2@Prrx2!0.62!5.16!Prrx2;;chr7:52471143..52471186,+!p1@Tead2!0.61!39.01!Tead2;;chr2:169458519..169458555,+!p2@Tshz2!0.61!14.45!Tshz2;;chr18:76219118..76219155,+!p1@Zbtb7c!0.61!5.99!Zbtb7c;;chr4:154010228..154010244,-!p4@Prdm16!0.61!4.54!Prdm16;;chr7:77511622..77511657,-!p5@Nr2f2!0.61!4.13!Nr2f2;;chr2:104966436..104966455,+!p7@Wt1!0.61!3.10!Wt1;;chr4:97444012..97444045,+!p4@Nfia!0.60!26.83!Nfia;;chr19:37509324..37509337,+!p1@Hhex!0.60!25.18!Hhex;;chr6:52154414..52154462,-!p1@Hoxa5!0.60!4.33!Hoxa5;;chr7:17642018..17642045,-!p4@Hif3a!0.60!3.51!Hif3a;;chr10:30562571..30562597,-!p1@Hey2!0.59!7.84!Hey2;;chr8:87225702..87225726,+!p3@Lyl1!0.59!6.60!Lyl1;;chr11:18918406..18918431,-!p6@Meis1!0.59!4.13!Meis1;;chr10:61595830..61595846,+!p1@Neurog3!0.59!2.89!Neurog3;;chr19:43686882..43686906,+!p2@Nkx2-3!0.59!2.89!Nkx2-3;;chr2:105003277..105003280,+!p5@Wt1!0.59!2.89!Wt1;;chr9:32503590..32503680,+!p1@Ets1!0.58!127.55!Ets1;;chr11:16908650..16908690,-!p1@Plek!0.58!20.85!Plek;;chr4:3865501..3865548,-!p1@Plag1!0.58!17.34!Plag1;;chr2:90936978..90937023,+!p3@Sfpi1!0.58!5.99!Sfpi1;;chr13:55932591..55932622,-!p1@Pitx1!0.58!3.51!Pitx1;;chr5:138187341..138187406,+!p3@Tsc22d4!0.57!35.91!Tsc22d4;;chr7:6649134..6649167,-!p1@Zim1!0.57!17.75!Zim1;;chr4:6917606..6917681,-!p1@Tox!0.57!13.62!Tox;;chr8:90483459..90483475,-!p1@Zfp423!0.57!8.67!Zfp423;;chr17:28487603..28487626,-!p2@Tead3!0.57!6.60!Tead3;;chr14:22806778..22806795,-!p5@Zfp503!0.57!3.10!Zfp503;;chr2:163332558..163332596,+!p2@Hnf4a!0.57!2.68!Hnf4a;;chr9:74709695..74709722,+!p1@Onecut1!0.57!2.68!Onecut1;;chr14:64562503..64562524,+!p1@Sox7!0.56!18.78!Sox7;;chr6:52163319..52163342,-!p1@Hoxa3!0.56!4.13!Hoxa3;;chr4:135728181..135728203,+!p2@E2f2!0.56!3.71!E2f2;;chr7:77511311..77511352,-!p4@Nr2f2!0.55!5.99!Nr2f2;;chr7:19608891..19608895,-!p1@Foxa3!0.55!3.51!Foxa3;;chr9:96159225..96159249,+!p5@Tfdp2!0.55!2.89!Tfdp2;;chr2:44968512..44968530,-!p1@Zeb2!0.54!68.73!Zeb2;;chr10:119913310..119913366,-!p1@Hmga2!0.54!24.35!Hmga2;;chr8:123260252..123260264,+!p1@Irf8!0.54!21.67!Irf8;;chr4:97444537..97444555,+!p8@Nfia!0.54!7.22!Nfia;;chr4:135129538..135129558,-!p1@Grhl3!0.54!4.13!Grhl3;;chr7:37483231..37483263,+!p2@Tshz3!0.54!4.13!Tshz3;;chr15:102865088..102865107,+!p1@Hoxc4!0.54!3.51!Hoxc4;;chr15:102844431..102844445,+!p1@Hoxc5!0.54!2.48!Hoxc5;;chr4:44723559..44723593,-!p1@Pax5!0.54!2.48!Pax5;;chr7:122989594..122989626,-!p1@Sox6!0.54!2.48!Sox6;;chr2:169458192..169458247,+!p1@Tshz2!0.53!26.83!Tshz2;;chr2:162880327..162880385,+!p2@Mybl2!0.53!20.02!Mybl2;;chr4:62626594..62626651,+!p1@Zfp618!0.53!11.14!Zfp618;;chr6:15135456..15135520,+!p3@Foxp2!0.53!5.99!Foxp2;;chr2:92886587..92886622,-!p3@Prdm11!0.53!3.92!Prdm11;;chr11:96143666..96143725,+!p1@Hoxb8!0.53!2.89!Hoxb8;;chr11:18918959..18918976,-!p2@Meis1!0.52!40.45!Meis1;;chr6:72739185..72739232,-!p1@Tcf7l1!0.52!30.96!Tcf7l1;;chr19:28754692..28754757,-!p1@Glis3!0.51!11.56!Glis3;;chrX:45245644..45245666,-!p2@Smarca1!0.51!8.87!Smarca1;;chr10:119914001..119914078,-!p4@Hmga2!0.51!3.30!Hmga2;;chr11:52096066..52096081,-!p2@Tcf7!0.51!2.89!Tcf7;;chr2:147871627..147871641,-!p1@Foxa2!0.51!2.27!Foxa2;;chr2:152223441..152223465,-!p2@Sox12!0.50!11.35!Sox12;;chr2:91864300..91864379,-!p2@Creb3l1!0.50!7.64!Creb3l1;;chr3:135271185..135271254,-!p4@Nfkb1!0.50!4.54!Nfkb1;;chr11:70043257..70043263,-!p1@Bcl6b!0.50!4.33!Bcl6b;;chr13:48356475..48356492,+!p1@Id4!0.49!60.47!Id4;;chr19:26822880..26822964,+!p2@Smarca2!0.49!23.32!Smarca2;;chr1:4483679..4483695,-!p1@Sox17!0.49!12.59!Sox17;;chr15:102865131..102865151,+!p2@Hoxc4!0.49!2.48!Hoxc4;;chr2:44968775..44968795,-!p4@Zeb2!0.48!12.38!Zeb2;;chr4:154010918..154010931,-!p1@Prdm16!0.48!7.43!Prdm16;;chr14:52935788..52935817,-!p2@Sall2!0.48!5.37!Sall2;;chr2:181406327..181406350,-!p1@Sox18!0.47!82.76!Sox18;;chr12:87027598..87027652,+!p1@Batf!0.47!5.57!Batf;;chr10:20880731..20880775,-!p2@Myb!0.47!4.95!Myb;;chr14:56443806..56443848,+!p1@Nfatc4!0.47!4.75!Nfatc4;;chr2:169458799..169458832,+!p5@Tshz2!0.47!3.71!Tshz2;;chr2:90922519..90922544,+!p6@Sfpi1!0.47!2.27!Sfpi1;;chr13:99954640..99954681,+!p1@Zfp366!0.46!8.87!Zfp366;;chr1:186556410..186556424,-!p1@Hlx!0.46!7.64!Hlx;;chr11:98821937..98821987,+!p4@Rara!0.46!5.16!Rara;;chr18:75979866..75979890,+!p3@Zbtb7c!0.46!4.75!Zbtb7c;;chr11:11585678..11585745,+!p5@Ikzf1!0.46!3.10!Ikzf1;;chr6:30908793..30908815,-!p1@Klf14!0.46!1.86!Klf14;;chr10:92773591..92773623,-!p1@Elk3!0.45!57.17!Elk3;;chr12:9581262..9581282,+!p1@Osr1!0.45!30.13!Osr1;;chr2:152223469..152223512,-!p1@Sox12!0.45!12.80!Sox12;;chr2:92886297..92886329,-!p1@Prdm11!0.45!11.35!Prdm11;;chr6:99216488..99216534,-!p2@Foxp1!0.45!6.60!Foxp1;;chr1:120950098..120950132,-!p2@Gli2!0.45!5.16!Gli2;;chr2:153475178..153475196,+!p1@Dnmt3b!0.45!4.75!Dnmt3b;;chr2:27532479..27532509,+!p3@Rxra!0.45!4.54!Rxra;;chr12:3891753..3891801,+!p4@Dnmt3a!0.45!3.51!Dnmt3a;;chr6:16848347..16848391,-!p1@Tfec!0.45!2.68!Tfec;;chr2:91864661..91864686,-!p1@Creb3l1!0.44!54.69!Creb3l1;;chrX:45807329..45807370,-!p1@Elf4!0.44!17.13!Elf4;;chr12:28027561..28027591,-!p1@Sox11!0.44!15.89!Sox11;;chr11:98821749..98821799,+!p2@Rara!0.44!15.07!Rara;;chr15:102301130..102301147,+!p3@Pcbp2!0.44!7.02!Pcbp2;;chr7:37483021..37483078,+!p1@Tshz3!0.44!7.02!Tshz3;;chr2:169458352..169458397,+!p3@Tshz2!0.44!5.57!Tshz2;;chr10:126778916..126778974,-!p1@Gli1!0.44!4.95!Gli1;;chr6:52154386..52154407,-!p2@Hoxa5!0.44!2.48!Hoxa5;;chr1:14746065..14746079,-!p1@Msc!0.44!2.27!Msc;;chr8:118231678..118231692,-!p2@Maf!0.43!21.46!Maf;;chr18:69681439..69681456,+!p7@Tcf4!0.43!5.57!Tcf4;;chr4:87452180..87452196,-!p3@Mllt3!0.43!4.13!Mllt3;;chr11:120491440..120491474,-!p3@Mafg!0.43!2.89!Mafg;;chr17:37139472..37139514,+!p1@Zfp57!0.42!15.69!Zfp57;;chr10:79389784..79389833,+!p1@Arid3a!0.42!12.18!Arid3a;;chr17:35031460..35031518,+!p1@Zbtb12!0.42!1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!0.15!0.41!Hmga2;;chr11:100721732..100721742,+!p3@Stat5a!0.15!0.41!Stat5a;;chr11:11590117..11590138,+!p4@Ikzf1!0.15!0.41!Ikzf1;;chr11:96132767..96132796,+!p2@Hoxb9!0.15!0.41!Hoxb9;;chr10:5734677..5734702,-!p4@Esr1!0.15!0.41!Esr1;;chr17:86087592..86087615,-!p1@Six2!0.15!0.41!Six2;;chr16:92826338..92826347,-!p6@Runx1!0.15!0.41!Runx1;;chr18:11052516..11052525,+!p5@Gata6!0.15!0.41!Gata6;;chr19:46222859..46222876,-!p1@Pitx3!0.15!0.41!Pitx3;;chr17:37139555..37139562,+!p6@Zfp57!0.15!0.41!Zfp57;;chr16:94085471..94085495,+!p1@Sim2!0.15!0.41!Sim2;;chr19:37511197..37511206,+!p3@Hhex!0.15!0.41!Hhex;;chr17:35031631..35031645,+!p5@Zbtb12!0.15!0.41!Zbtb12;;chr4:114732159..114732166,+!p6@Tal1!0.15!0.41!Tal1;;chr4:97444557..97444558,+!p23@Nfia!0.15!0.41!Nfia;;chr4:84321280..84321298,-!p5@Bnc2!0.15!0.41!Bnc2;;chr2:9800094..9800108,-!p3@Gata3!0.15!0.41!Gata3;;chr2:74536026..74536039,+!p1@Hoxd9!0.15!0.41!Hoxd9;;chr4:108132386..108132400,+!p14@Zcchc11!0.15!0.41!Zcchc11;;chr4:114730015..114730042,+!p7@Tal1!0.15!0.41!Tal1;;chr4:135736707..135736724,+!p8@E2f2!0.15!0.41!E2f2;;chr4:114730288..114730306,+!p8@Tal1!0.15!0.41!Tal1;;chr3:128918394..128918413,+!p5@Pitx2!0.15!0.41!Pitx2;;chr3:58219238..58219246,+!p3@Tsc22d2!0.15!0.41!Tsc22d2;;chr4:97444086..97444093,+!p24@Nfia!0.15!0.41!Nfia;;chr2:81893447..81893468,+!p2@Zfp804a!0.15!0.41!Zfp804a;;chr2:90936867..90936874,+!p7@Sfpi1!0.15!0.41!Sfpi1;;chr2:81893535..81893548,+!p1@Zfp804a!0.15!0.41!Zfp804a;;chr4:154010882..154010889,-!p10@Prdm16!0.15!0.41!Prdm16;;chr3:29911808..29911833,-!p8@Mecom!0.15!0.41!Mecom;;chr4:87452167..87452178,-!p8@Mllt3!0.15!0.41!Mllt3;;chr5:102094214..102094230,-!p1@Nkx6-1!0.15!0.41!Nkx6-1;;chr3:29911926..29911942,-!p13@Mecom!0.15!0.41!Mecom;;chr19:59532915..59532940,+!p5@Emx2!0.15!0.41!Emx2;;chr2:17976830..17976848,+!p12@Mllt10!0.15!0.41!Mllt10;;chr1:169528823..169528860,+!p5@Rxrg!0.15!0.41!Rxrg;;chr1:64579145..64579168,+!p6@Creb1!0.15!0.41!Creb1;;chr2:103264213..103264233,+!p1@Elf5!0.15!0.41!Elf5;;chr19:59533595..59533628,+!p6@Emx2!0.15!0.41!Emx2;;chr2:166868994..166869023,-!p7@Znfx1!0.15!0.41!Znfx1;;chr2:103123925..103123959,-!p3@Ehf!0.15!0.41!Ehf;;chr19:59534008..59534046,+!p7@Emx2!0.15!0.41!Emx2;;chr2:30700830..30700843,+!p4@Prrx2!0.15!0.41!Prrx2;;chr1:138857048..138857071,-!p2@Nr5a2!0.15!0.41!Nr5a2;;chr1:167865149..167865167,-!p3@Pou2f1!0.15!0.41!Pou2f1;;chr2:115891770..115891799,-!p25@Meis2!0.15!0.41!Meis2;;chr19:55969923..55969944,+!p6@Tcf7l2!0.15!0.41!Tcf7l2;;chr1:140739042..140739054,-!p2@Lhx9!0.15!0.41!Lhx9;;chr2:147872790..147872821,-!p2@Foxa2!0.15!0.41!Foxa2;;chr2:28477422..28477433,-!p2@Gfi1b!0.15!0.41!Gfi1b;;chr8:74842952..74842970,+!p1@Klf2!0.14!84.41!Klf2;;chr8:107821563..107821642,+!p1@E2f4!0.14!35.09!E2f4;;chr5:138558139..138558214,+!p1@Zscan21!0.14!33.64!Zscan21;;chr18:14131126..14131211,-!p1@Zfp521!0.14!25.59!Zfp521;;chr16:50432467..50432522,-!p1@Bbx!0.14!24.15!Bbx;;chr6:29997979..29998049,+!p1@Nrf1!0.14!22.50!Nrf1;;chr9:63605740..63605771,-!p1@Smad3!0.14!17.54!Smad3;;chr12:77471524..77471607,+!p1@Zbtb1!0.14!15.48!Zbtb1;;chr11:59319701..59319741,-!p1@Zkscan17!0.14!13.83!Zkscan17;;chr8:108939219..108939296,+!p1@Zfp90!0.14!12.59!Zfp90;;chr10:20032304..20032324,+!p2@Bclaf1!0.14!11.14!Bclaf1;;chr11:65620712..65620729,+!p1@Zkscan6!0.14!9.70!Zkscan6;;chr2:126501197..126501245,-!p1@Gabpb1!0.14!8.87!Gabpb1;;chr2:169956656..169956684,-!p1@Zfp217!0.14!7.64!Zfp217;;chr7:30906934..30907020,+!p1@Zfp382!0.14!7.64!Zfp382;;chr18:75527030..75527055,+!p2@Smad7!0.14!7.02!Smad7;;chr10:62328186..62328219,-!p1@Tet1!0.14!6.81!Tet1;;chr8:72520162..72520197,-!p4@Gatad2a!0.14!5.78!Gatad2a;;chr3:135354289..135354334,-!p3@Nfkb1!0.14!5.57!Nfkb1;;chr6:65728988..65729056,+!p1@Prdm5!0.14!5.37!Prdm5;; | ||
Line 45: | Line 45: | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11035 | |library_id=CNhs11035 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs11035 | ||
|name=spleen, embryo E16 | |name=spleen, embryo E16 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 51: | Line 51: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11035,LSID732,release008,COMPLETED | |profile_hcage=CNhs11035,LSID732,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|repeat_enrich_byfamily=-0.0770522958052115,0,0.00415059153831483,0,0.0814866010703366,0,-0.104489472029866,0,0,0,0,0.265583169211483,0,0,0,0,0,0,0.0694997800189989,0,0.0407433005351683,0,0,0,0,0.0814866010703366,0,0,0,0,0,0,0.216333869267416,0,0,0,0,0,0.0492770736925489,0.0198342723536606,-0.0111505022410543,0.0616182490728342,0.153556643396508,0,0,0,0,0,0,0,0,0,0,0.150072612586664,0,-0.0660055475634404,0,0,0,0,0,0,0,0,0,0,0.0874444790104409,0.301688404489783,-0.158091042771083,0.0133180839142448,0,0.0034780003183852,0,0,0.0814866010703366,0,0.00625445618007105,-0.0917099688385443,-0.334521749838996,0.0712410177467562,0,0,0,0,0.0407433005351683,0,-0.145605663129316,-0.0899661735817814,-0.22905970169623,0,0,0,0,0 | |repeat_enrich_byfamily=-0.0770522958052115,0,0.00415059153831483,0,0.0814866010703366,0,-0.104489472029866,0,0,0,0,0.265583169211483,0,0,0,0,0,0,0.0694997800189989,0,0.0407433005351683,0,0,0,0,0.0814866010703366,0,0,0,0,0,0,0.216333869267416,0,0,0,0,0,0.0492770736925489,0.0198342723536606,-0.0111505022410543,0.0616182490728342,0.153556643396508,0,0,0,0,0,0,0,0,0,0,0.150072612586664,0,-0.0660055475634404,0,0,0,0,0,0,0,0,0,0,0.0874444790104409,0.301688404489783,-0.158091042771083,0.0133180839142448,0,0.0034780003183852,0,0,0.0814866010703366,0,0.00625445618007105,-0.0917099688385443,-0.334521749838996,0.0712410177467562,0,0,0,0,0.0407433005351683,0,-0.145605663129316,-0.0899661735817814,-0.22905970169623,0,0,0,0,0 |
Revision as of 11:08, 28 November 2014
Name: | spleen, embryo E16 |
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Species: | Mouse (Mus musculus) |
Library ID: | CNhs11035 |
Sample type: | developmental |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
CNhs11035
0 | 0 |
1 | 0 |
10 | 0 |
100 | 0 |
1000 | 0.00363 |
1001 | -0.0631 |
1002 | 0.239 |
1003 | 0.0389 |
1004 | 0 |
1005 | 0.109 |
1006 | -0.107 |
1007 | 0.0301 |
1008 | 0 |
1009 | 0.152 |
101 | 0.049 |
1010 | 0.209 |
1011 | -0.00851 |
1012 | 0 |
1013 | -0.0113 |
1014 | 0.209 |
1015 | 0.135 |
1016 | 0.187 |
1017 | 0.0815 |
1018 | 0.0815 |
1019 | 0 |
102 | 0 |
1020 | 0 |
1021 | 0 |
1022 | -0.142 |
1023 | 0 |
1024 | -0.00131 |
1025 | 0.247 |
1026 | 0 |
1027 | 0 |
1028 | 0 |
1029 | -0.0945 |
103 | 0.259 |
1030 | 0 |
1031 | 0.329 |
1032 | -0.0782 |
1033 | 0.015 |
1034 | 0.0301 |
1035 | 0 |
1036 | 0.123 |
1037 | 0 |
1038 | 0.0487 |
1039 | -0.125 |
104 | 0 |
1040 | 0.202 |
1041 | 0 |
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11035
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11035
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.191 |
10 | 10 | 0.966 |
100 | 100 | 0.645 |
101 | 101 | 0.622 |
102 | 102 | 0.765 |
103 | 103 | 0.881 |
104 | 104 | 0.886 |
105 | 105 | 0.54 |
106 | 106 | 0.48 |
107 | 107 | 0.281 |
108 | 108 | 0.958 |
109 | 109 | 0.0826 |
11 | 11 | 0.751 |
110 | 110 | 0.69 |
111 | 111 | 0.206 |
112 | 112 | 0.461 |
113 | 113 | 0.971 |
114 | 114 | 0.078 |
115 | 115 | 0.322 |
116 | 116 | 0.242 |
117 | 117 | 0.854 |
118 | 118 | 0.967 |
119 | 119 | 0.382 |
12 | 12 | 0.223 |
120 | 120 | 0.432 |
121 | 121 | 0.918 |
122 | 122 | 0.864 |
123 | 123 | 0.0173 |
124 | 124 | 0.5 |
125 | 125 | 0.348 |
126 | 126 | 0.582 |
127 | 127 | 0.613 |
128 | 128 | 0.717 |
129 | 129 | 0.209 |
13 | 13 | 0.027 |
130 | 130 | 0.00615 |
131 | 131 | 0.909 |
132 | 132 | 0.399 |
133 | 133 | 0.103 |
134 | 134 | 0.187 |
135 | 135 | 0.319 |
136 | 136 | 0.0614 |
137 | 137 | 0.07 |
138 | 138 | 0.00642 |
139 | 139 | 0.0737 |
14 | 14 | 0.863 |
140 | 140 | 0.576 |
141 | 141 | 0.987 |
142 | 142 | 0.814 |
143 | 143 | 0.476 |
144 | 144 | 0.526 |
145 | 145 | 0.0526 |
146 | 146 | 0.822 |
147 | 147 | 0.289 |
148 | 148 | 0.122 |
149 | 149 | 0.434 |
15 | 15 | 0.731 |
150 | 150 | 0.0513 |
151 | 151 | 0.608 |
152 | 152 | 0.117 |
153 | 153 | 0.525 |
154 | 154 | 0.393 |
155 | 155 | 0.437 |
156 | 156 | 2.75692e-5 |
157 | 157 | 0.818 |
158 | 158 | 0.99 |
159 | 159 | 0.308 |
160 | 160 | 0.0431 |
161 | 161 | 0.0324 |
162 | 162 | 0.622 |
163 | 163 | 0.76 |
164 | 164 | 0.581 |
165 | 165 | 0.228 |
166 | 166 | 0.344 |
167 | 167 | 0.413 |
168 | 168 | 0.855 |
169 | 169 | 0.139 |
17 | 17 | 0.391 |
18 | 18 | 0.28 |
19 | 19 | 0.112 |
2 | 2 | 0.79 |
20 | 20 | 0.994 |
21 | 21 | 0.0841 |
22 | 22 | 0.242 |
23 | 23 | 0.259 |
24 | 24 | 0.00212 |
25 | 25 | 0.11 |
26 | 26 | 0.0188 |
27 | 27 | 0.962 |
28 | 28 | 0.231 |
29 | 29 | 0.928 |
3 | 3 | 0.916 |
30 | 30 | 0.638 |
31 | 31 | 0.545 |
32 | 32 | 0.307 |
33 | 33 | 0.177 |
34 | 34 | 0.381 |
35 | 35 | 0.0293 |
36 | 36 | 0.711 |
37 | 37 | 0.455 |
38 | 38 | 0.765 |
39 | 39 | 0.638 |
4 | 4 | 0.558 |
40 | 40 | 0.695 |
41 | 41 | 0.387 |
42 | 42 | 0.275 |
43 | 43 | 0.935 |
44 | 44 | 0.0657 |
45 | 45 | 0.722 |
46 | 46 | 0.692 |
47 | 47 | 0.406 |
48 | 48 | 0.608 |
49 | 49 | 0.295 |
5 | 5 | 0.507 |
50 | 50 | 0.0571 |
51 | 51 | 0.55 |
52 | 52 | 0.494 |
53 | 53 | 0.601 |
54 | 54 | 0.377 |
55 | 55 | 0.581 |
56 | 56 | 0.716 |
57 | 57 | 0.657 |
58 | 58 | 0.581 |
59 | 59 | 0.177 |
6 | 6 | 0.623 |
60 | 60 | 0.5 |
61 | 61 | 0.146 |
62 | 62 | 0.192 |
63 | 63 | 0.777 |
64 | 64 | 0.793 |
65 | 65 | 0.956 |
66 | 66 | 0.991 |
67 | 67 | 0.874 |
68 | 68 | 0.0547 |
69 | 69 | 0.944 |
7 | 7 | 0.543 |
70 | 70 | 0.00333 |
71 | 71 | 0.421 |
72 | 72 | 0.139 |
73 | 73 | 0.124 |
74 | 74 | 0.571 |
75 | 75 | 0.852 |
76 | 76 | 0.72 |
77 | 77 | 0.825 |
78 | 78 | 0.301 |
79 | 79 | 0.617 |
8 | 8 | 0.795 |
80 | 80 | 0.542 |
81 | 81 | 0.654 |
82 | 82 | 0.559 |
83 | 83 | 0.436 |
84 | 84 | 0.00312 |
85 | 85 | 0.233 |
86 | 86 | 0.921 |
87 | 87 | 0.617 |
88 | 88 | 0.767 |
89 | 89 | 0.499 |
9 | 9 | 0.244 |
90 | 90 | 0.257 |
91 | 91 | 0.761 |
92 | 92 | 0.441 |
93 | 93 | 0.91 |
94 | 94 | 0.717 |
95 | 95 | 0.12 |
96 | 96 | 0.35 |
97 | 97 | 0.909 |
98 | 98 | 0.477 |
99 | 99 | 0.186 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11035
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002106 (spleen)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0005177 (trunk region element)
0004177 (hemopoietic organ)
0005057 (immune organ)
0005172 (abdomen element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002390 (hematopoietic system)
0002417 (abdominal segment of trunk)
0002193 (hemolymphoid system)
0000916 (abdomen)
0002405 (immune system)
FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000999 (fetal tissue sample)
0000292 (embryonic day sample - mouse)
0000004 (tissue sample)
0000299 (mouse embryonic day 16 sample)
0011360 (mouse spleen- embryo E16 sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0004872 (splanchnic layer of lateral plate mesoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)