FFCP PHASE1:Hg19::chr10:110165577..110165582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:110165577..110165582,- | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_at_chr10:110165577..110165582,- | |description=CAGE_peak_at_chr10:110165577..110165582,- | ||
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|ontology_enrichment_celltype=CL:0005020!1.77e-09!6;CL:0002138!1.77e-09!6;CL:0005022!1.77e-09!6 | |ontology_enrichment_celltype=CL:0005020!1.77e-09!6;CL:0002138!1.77e-09!6;CL:0005022!1.77e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002573;1.52e-87;2!CL:0000243;1.09e-35;15!CL:0000125;1.09e-35;15!CL:0000095;4.52e-32;17!CL:0002319;5.98e-23;25 | |ontology_enrichment_celltype_v019=CL:0002573;1.52e-87;2!CL:0000243;1.09e-35;15!CL:0000125;1.09e-35;15!CL:0000095;4.52e-32;17!CL:0002319;5.98e-23;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.52e-87,2;CL:0000243,1.09e-35,15;CL:0000125,1.09e-35,15;CL:0000030,1.09e-35,15;CL:0000339,1.09e-35,15;CL:0000095,4.52e-32,17;CL:0000123,4.52e-32,17;CL:0002319,5.98e-23,25;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.09e-35;15!UBERON:0006238;2.32e-07;10!CL:0000221;3.38e-07;72 | |ontology_enrichment_development_v019=CL:0000339;1.09e-35;15!UBERON:0006238;2.32e-07;10!CL:0000221;3.38e-07;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | |ontology_enrichment_disease_v019=DOID:3093;7.48e-07;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001473!4.15e-07!8;UBERON:0004536!4.15e-07!8;UBERON:0006558!4.15e-07!8 | |ontology_enrichment_uberon=UBERON:0001473!4.15e-07!8;UBERON:0004536!4.15e-07!8;UBERON:0006558!4.15e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;3.59e-30;8 | |ontology_enrichment_uberon_v019=UBERON:0000010;3.59e-30;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.59e-30,8;UBERON:0001016,1.68e-07,89 | |||
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| ||
|short_description=p@chr10:110165577..110165582,- | |short_description=p@chr10:110165577..110165582,- | ||
}} | }} |
Latest revision as of 10:14, 23 July 2015
Short description: | p@chr10:110165577..110165582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:110165577..110165582, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.52e-87 | 2 |
glial cell (sensu Vertebrata) | 1.09e-35 | 15 |
glial cell | 1.09e-35 | 15 |
glioblast | 1.09e-35 | 15 |
glioblast (sensu Vertebrata) | 1.09e-35 | 15 |
neuron associated cell | 4.52e-32 | 17 |
neuron associated cell (sensu Vertebrata) | 4.52e-32 | 17 |
neural cell | 5.98e-23 | 25 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.59e-30 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |