FFCP PHASE1:Hg19::chr10:121596306..121596309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:121596306..121596309,+ | |||
|description=CAGE_peak_at_chr10:121596306..121596309,+ | |description=CAGE_peak_at_chr10:121596306..121596309,+ | ||
|id=chr10:121596306..121596309,+ | |id=chr10:121596306..121596309,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0002032!4.43e-09!165;CL:0000837!4.43e-09!165;CL:0000988!8.42e-09!182;CL:0002087!2.42e-08!119;CL:0002031!4.19e-08!124;CL:0000838!1.24e-07!52;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000738!2.62e-07!140 | |ontology_enrichment_celltype=CL:0000037!1.74e-09!172;CL:0000566!1.74e-09!172;CL:0002032!4.43e-09!165;CL:0000837!4.43e-09!165;CL:0000988!8.42e-09!182;CL:0002087!2.42e-08!119;CL:0002031!4.19e-08!124;CL:0000838!1.24e-07!52;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000738!2.62e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000226;1.21e-08;3!CL:0000842;1.21e-08;3!CL:0000236;1.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,1.12e-08,3;CL:0000842,1.12e-08,3;CL:0000236,3.24e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.06e-23;1!UBERON:0003056;8.31e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.65e-12;2!DOID:8692;3.10e-07;31!DOID:5093;8.61e-07;4!DOID:1612;8.61e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.65e-12,2;DOID:8692,4.87e-07,31;DOID:5093,9.63e-07,4;DOID:1612,9.63e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.06e-23;1!UBERON:0001785;1.06e-23;1!UBERON:0002464;1.06e-23;1!UBERON:0004904;1.06e-23;1!UBERON:0001021;1.06e-23;1!UBERON:0003714;1.48e-12;2!UBERON:0005162;1.48e-12;2!UBERON:0000122;1.48e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.07e-23,1;UBERON:0001785,1.07e-23,1;UBERON:0002464,1.07e-23,1;UBERON:0004904,1.07e-23,1;UBERON:0001021,1.07e-23,1;UBERON:0003902,1.07e-23,1;UBERON:0005425,1.07e-23,1;UBERON:0003714,1.48e-12,2;UBERON:0005162,1.48e-12,2;UBERON:0000122,1.48e-12,2;UBERON:0001781,6.50e-07,4 | |||
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| ||
|short_description=p@chr10:121596306..121596309,+ | |short_description=p@chr10:121596306..121596309,+ | ||
}} | }} |
Latest revision as of 11:03, 23 July 2015
Short description: | p@chr10:121596306..121596309, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:121596306..121596309, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 1.12e-08 | 3 |
mononuclear cell | 1.12e-08 | 3 |
B cell | 3.24e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.07e-23 | 1 |
cranial nerve | 1.07e-23 | 1 |
nerve trunk | 1.07e-23 | 1 |
nerve connecting eye with brain | 1.07e-23 | 1 |
nerve | 1.07e-23 | 1 |
retinal neural layer | 1.07e-23 | 1 |
presumptive neural retina | 1.07e-23 | 1 |
neural tissue | 1.48e-12 | 2 |
multi cell component structure | 1.48e-12 | 2 |
neuron projection bundle | 1.48e-12 | 2 |
layer of retina | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.65e-12 | 2 |
myeloid leukemia | 4.87e-07 | 31 |
thoracic cancer | 9.63e-07 | 4 |
breast cancer | 9.63e-07 | 4 |