FFCP PHASE1:Hg19::chr10:129907676..129907689,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129907676..129907689,- | |||
|coexpression_cluster_id=C523 | |||
|description=CAGE_peak_at_chr10:129907676..129907689,- | |description=CAGE_peak_at_chr10:129907676..129907689,- | ||
|id=chr10:129907676..129907689,- | |id=chr10:129907676..129907689,- | ||
|ontology_enrichment_celltype=CL:0000066!1.64e-09!254;CL:0000548!1.49e-07!679;CL:0000004!1.49e-07!679;CL:0000255!1.49e-07!679;CL:0000012!3.64e-07!682 | |ontology_enrichment_celltype=CL:0000066!1.64e-09!254;CL:0000548!1.49e-07!679;CL:0000004!1.49e-07!679;CL:0000255!1.49e-07!679;CL:0000012!3.64e-07!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.96e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.13e-49!239;DOID:162!8.03e-48!235;DOID:0050687!8.47e-23!143;DOID:0050686!8.76e-20!137;DOID:2531!3.31e-17!51;DOID:0060083!3.31e-17!51;DOID:305!9.02e-16!106;DOID:1240!1.73e-12!39;DOID:8692!9.15e-08!31;DOID:0060058!8.26e-07!10;DOID:7!8.51e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.11e-11;51!DOID:0060083;9.11e-11;51!DOID:0060058;1.41e-09;10!DOID:1240;2.72e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.84e-24,235;DOID:14566,4.99e-23,239;DOID:2531,1.86e-16,51;DOID:0060083,1.86e-16,51;DOID:1240,1.60e-10,39;DOID:0050686,3.44e-10,137;DOID:0050687,2.50e-09,143;DOID:0060058,3.00e-09,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.572471974262113,1.91624195102038,0.87879847716362,2.13957536094264,1.31360943119913,2.04648031415566,0,0,0,0,0,0,1.08454080812422,1.42169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.768547918354051,1.1705341280389,2.30213066445147,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,1.41867352879343,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.421352420106746,0,2.33385202892359,0,0,0.247266929278557,0,0,0.841680569770331,0.875829639103749,0.277064115484183,0,0,0,0.226864366320042,1.07633781413317,0,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0.504867548488229,0,0,0,0.302256294682921,0.847802961552438,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.932949495138334,0.756962552626885,1.09493207722749,0,0,0,0,0,1.0647612003586,0.674338760312407,2.16909926895134,0.992645754591546,0.653638332277218,0.949082476444386,0.808987848960987,0.784885860501384,2.30848294167834,0,0,0,0,0,0,0,3.09024169590255,0.245976877086227,0.686271241194102,0,0,0.804231779293047,0.277765335475589,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.433099343283221,2.77791307545966,1.52203321787679,0.790204397959275,0,0,0.234004265139238,0.594524649154913,0,0.16798212819886,0.141775097242386,1.52249488594842,1.16253575405585,0.766765358330422,0,0.088048434013226,0,0,0,0.761974731506028,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.2933531432838,0,0,2.535908257668,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,2.24170287987055,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.892144943985809,0,0.468565659970853,0,0,0,0.664225598535437,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,1.54209693802656,0,0.328508624055237,0.519254429183621,0.464841513839837,0.725156697549733,0,0,0.229628896329213,4.18809686415449,0,0,0.385076685522074,0,0,1.05551628892876,0,0,2.80690690932781,0,0,0,0.254876273045038,0,0,3.94667777962682,0.261435451024901,0.512900250232778,0,0.325378394664303,0,1.19040304263846,0.660075999364704,0,0,0,0,0.154048617114644,0.460511024178389,0.551346289938122,0.322260734604821,0.580066775656914,0.596586391912706,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0.430234056612155,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,3.92064345569651,4.45927620301725,1.73123055571734,0.995985806877798,2.71024663638998,3.19326994292507,0.383010740264733,0.423347165447766,1.29848776109822,0.561594356226918,0.684704037099577,1.88015874927628,0,1.18504244461122,2.56940920165919,2.62339619348362,0.425846237690326,0,0.614481528616916,0.671028323677248,0.500547425135725,2.34465714482448,1.39203086947621,0,0.540911356951966,0.33307196799782,0,0.935702702041099,0,0.121360521749513,1.00299045849731,0.568272293612826,0,0.296964680832639,0,0,0,0.111308705022906,0.659215496907038,0.211125408127993,0,0,1.76352923497993,0.102268682502155,0.861593638227486,0,0.449341755736634,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,1.93448862085349,0.508507300585533,1.18193840883968,1.03423011972439,0.291604613383254,3.47249989866585,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,0.46112780877612,0.807818799687949,0.217294743844016,0,0,0,3.06579894587209,0.156980256395025,0,0.902382642468723,0.392125068635479,1.51039428278258,0.75901493089674,0.158936578980379,0.632994193584081,0.816164040795739,0,0.432777279484182,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,6.20346283333264,0.19566461893209,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,1.38674673013139,0.520679215005393,0.0979923974143777,0.609414446062818,0,1.20390222730132,2.41890828222713,1.09633975629278,1.06750094169172,0.0969890164884194,0,0,0.411125773940253,2.38457534043588,0,1.95551382734803,0,0.213452994739353,0.599428828746391,2.01726584015748,0.114536596165916,0.857974989309823,0,0.124252535565433,0.707082103850386,0.951329442515298,0.209205692624666,0.917983958726896,0,0,0,0,0.429765441419957,3.41753560563109,0.279282401272254,0,0,0.798716001995964,0,0,0.134366944973453,0,0,1.02418136999391,0.741742725430498,0.943649613958588,0.295282444544246,1.43944664511834,0,0,0.643012593860077,1.10031549277787,2.49264202817511,0,0,0,0.670869375198532,0,0.104909176269996,0,0,0,0,0,1.017074150619,0.542999601753713,0,0.979762080328227,1.19730191562487,0.410462603746695,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0.790446527591777,0.487170393523584,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,3.45871587340577,0.499921631848426,0.151649117541648,0,0.235265819698172,1.87333962322753,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0.466311601748341,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,0,1.62748293281865,0.181848659202559,0.107410557042488,0,0,2.40016658797892,0,0,0,0,0,0.260994291965212,2.26705925512272,0.463044948647668,2.69210374957114,2.50724377514082,0.617602894321944,0.657852148736121,2.29695889729645,1.15748422962549,0.844712203265363,0.76872455576384,0.345430341731199,2.43087964941906,0,0,0,0,0.982829546539238,0,0.422624246717254,0.59996218756479,0.640150378164845,0,0.567515953566836,0.920529751259204,0,0,0.127894371303652,0.539124056983409,0.786329709279482,3.71312769852847,0.169732529954025,1.91317428091515,1.11542187833102,0,0.318004350653419,1.02520268501629,0.80057074828547,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,1.65085738669511,1.73288499225507,0.381382095467167,0,0,0,0.40341013740704,0,0.785720083444267,2.45657876265145,0,0,0,0,0,0,0,0,0.879356221798103,0.511049710558381,0,0,0,0,0,1.61327582578091,0.342976018874837,0,0,2.00929529502746,0.778619813244484,0,0,1.12108865325516,0,0.215927591218621,0,0,1.26410889386181,1.27865567904938,1.21700790611806,0,0.207216164163037,0,0,0,0.473328002922261,0.340853619036631,0,0.68732060563215,0,1.91107787795487,0.671132590786754,0.294450700845729,0.121917924982269,0,0,0,0,0.233939463462106,2.98426162742052,0.237840181555137,0,1.64910775118144,0.905777061400041,0,0.655678681511872,0,0,0,0,0,0,0.339854229375634,0.0939839179798536,0,1.09935271517422,0.178553938605658,0,0.0802413666891683,0,0,0,2.52434499509095,0,0,0.5290268405154,0.371995018166751,0,1.29787968637137,0.126166424835079,1.31118686356435,0.886889507080059,0.101988829741982,0,0.275684698604535,6.76910356089413,0,0,0,0,0,0.23806443146374,0.775066918032073,0.496597714366863,0.560659312903067,0,0.404234377916439,0.435433495793923,0.342233301085281,0.0673520530145875,0,0.332660356546013,0.244209805832924,0.853818767021724,1.9307228228694,0,0,0,0,0,0.402547587182052,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.572471974262113,1.91624195102038,0.87879847716362,2.13957536094264,1.31360943119913,2.04648031415566,0,0,0,0,0,0,1.08454080812422,1.42169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.768547918354051,1.1705341280389,2.30213066445147,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0,0.289693037921647,0,0,0.189069634328136,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.357198913136319,0,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0,0,0.286836620748814,1.41867352879343,0.560677600142307,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.421352420106746,0,2.33385202892359,0,0,0.247266929278557,0,0,0.841680569770331,0.875829639103749,0.277064115484183,0,0,0,0.226864366320042,1.07633781413317,0,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0.504867548488229,0,0,0,0.302256294682921,0.847802961552438,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.932949495138334,0.756962552626885,1.09493207722749,0,0,0,0,0,1.0647612003586,0.674338760312407,2.16909926895134,0.992645754591546,0.653638332277218,0.949082476444386,0.808987848960987,0.784885860501384,2.30848294167834,0,0,0,0,0,0,0,3.09024169590255,0.245976877086227,0.686271241194102,0,0,0.804231779293047,0.277765335475589,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.433099343283221,2.77791307545966,1.52203321787679,0.790204397959275,0,0,0.234004265139238,0.594524649154913,0,0.16798212819886,0.141775097242386,1.52249488594842,1.16253575405585,0.766765358330422,0,0.088048434013226,0,0,0,0.761974731506028,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.2933531432838,0,0,2.535908257668,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,2.24170287987055,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.892144943985809,0,0.468565659970853,0,0,0,0.664225598535437,0,0.781952530212746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,1.54209693802656,0,0.328508624055237,0.519254429183621,0.464841513839837,0.725156697549733,0,0,0.229628896329213,4.18809686415449,0,0,0.385076685522074,0,0,1.05551628892876,0,0,2.80690690932781,0,0,0,0.254876273045038,0,0,3.94667777962682,0.261435451024901,0.512900250232778,0,0.325378394664303,0,1.19040304263846,0.660075999364704,0,0,0,0,0.154048617114644,0.460511024178389,0.551346289938122,0.322260734604821,0.580066775656914,0.596586391912706,0.178064071293475,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0.430234056612155,0.0982490410131212,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,3.92064345569651,4.45927620301725,1.73123055571734,0.995985806877798,2.71024663638998,3.19326994292507,0.383010740264733,0.423347165447766,1.29848776109822,0.561594356226918,0.684704037099577,1.88015874927628,0,1.18504244461122,2.56940920165919,2.62339619348362,0.425846237690326,0,0.614481528616916,0.671028323677248,0.500547425135725,2.34465714482448,1.39203086947621,0,0.540911356951966,0.33307196799782,0,0.935702702041099,0,0.121360521749513,1.00299045849731,0.568272293612826,0,0.296964680832639,0,0,0,0.111308705022906,0.659215496907038,0.211125408127993,0,0,1.76352923497993,0.102268682502155,0.861593638227486,0,0.449341755736634,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,1.93448862085349,0.508507300585533,1.18193840883968,1.03423011972439,0.291604613383254,3.47249989866585,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,0.46112780877612,0.807818799687949,0.217294743844016,0,0,0,3.06579894587209,0.156980256395025,0,0.902382642468723,0.392125068635479,1.51039428278258,0.75901493089674,0.158936578980379,0.632994193584081,0.816164040795739,0,0.432777279484182,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,6.20346283333264,0.19566461893209,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,1.38674673013139,0.520679215005393,0.0979923974143777,0.609414446062818,0,1.20390222730132,2.41890828222713,1.09633975629278,1.06750094169172,0.0969890164884194,0,0,0.411125773940253,2.38457534043588,0,1.95551382734803,0,0.213452994739353,0.599428828746391,2.01726584015748,0.114536596165916,0.857974989309823,0,0.124252535565433,0.707082103850386,0.951329442515298,0.209205692624666,0.917983958726896,0,0,0,0,0.429765441419957,3.41753560563109,0.279282401272254,0,0,0.798716001995964,0,0,0.134366944973453,0,0,1.02418136999391,0.741742725430498,0.943649613958588,0.295282444544246,1.43944664511834,0,0,0.643012593860077,1.10031549277787,2.49264202817511,0,0,0,0.670869375198532,0,0.104909176269996,0,0,0,0,0,1.017074150619,0.542999601753713,0,0.979762080328227,1.19730191562487,0.410462603746695,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0.790446527591777,0.487170393523584,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,3.45871587340577,0.499921631848426,0.151649117541648,0,0.235265819698172,1.87333962322753,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0.466311601748341,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0,0,1.62748293281865,0.181848659202559,0.107410557042488,0,0,2.40016658797892,0,0,0,0,0,0.260994291965212,2.26705925512272,0.463044948647668,2.69210374957114,2.50724377514082,0.617602894321944,0.657852148736121,2.29695889729645,1.15748422962549,0.844712203265363,0.76872455576384,0.345430341731199,2.43087964941906,0,0,0,0,0.982829546539238,0,0.422624246717254,0.59996218756479,0.640150378164845,0,0.567515953566836,0.920529751259204,0,0,0.127894371303652,0.539124056983409,0.786329709279482,3.71312769852847,0.169732529954025,1.91317428091515,1.11542187833102,0,0.318004350653419,1.02520268501629,0.80057074828547,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,1.65085738669511,1.73288499225507,0.381382095467167,0,0,0,0.40341013740704,0,0.785720083444267,2.45657876265145,0,0,0,0,0,0,0,0,0.879356221798103,0.511049710558381,0,0,0,0,0,1.61327582578091,0.342976018874837,0,0,2.00929529502746,0.778619813244484,0,0,1.12108865325516,0,0.215927591218621,0,0,1.26410889386181,1.27865567904938,1.21700790611806,0,0.207216164163037,0,0,0,0.473328002922261,0.340853619036631,0,0.68732060563215,0,1.91107787795487,0.671132590786754,0.294450700845729,0.121917924982269,0,0,0,0,0.233939463462106,2.98426162742052,0.237840181555137,0,1.64910775118144,0.905777061400041,0,0.655678681511872,0,0,0,0,0,0,0.339854229375634,0.0939839179798536,0,1.09935271517422,0.178553938605658,0,0.0802413666891683,0,0,0,2.52434499509095,0,0,0.5290268405154,0.371995018166751,0,1.29787968637137,0.126166424835079,1.31118686356435,0.886889507080059,0.101988829741982,0,0.275684698604535,6.76910356089413,0,0,0,0,0,0.23806443146374,0.775066918032073,0.496597714366863,0.560659312903067,0,0.404234377916439,0.435433495793923,0.342233301085281,0.0673520530145875,0,0.332660356546013,0.244209805832924,0.853818767021724,1.9307228228694,0,0,0,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p@chr10:129907676..129907689,- | |short_description=p@chr10:129907676..129907689,- | ||
}} | }} |
Latest revision as of 11:39, 23 July 2015
Short description: | p@chr10:129907676..129907689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129907676..129907689, - |
Coexpression cluster: | C523_diffuse_acute_testicular_medulloblastoma_acantholytic_mesenchymal_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.84e-24 | 235 |
disease of cellular proliferation | 4.99e-23 | 239 |
hematologic cancer | 1.86e-16 | 51 |
immune system cancer | 1.86e-16 | 51 |
leukemia | 1.60e-10 | 39 |
organ system cancer | 3.44e-10 | 137 |
cell type cancer | 2.50e-09 | 143 |
lymphoma | 3.00e-09 | 10 |