FFCP PHASE1:Hg19::chr10:17277255..17277323,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:17277255..17277323,- to FFCP PHASE1:Hg19::chr10:17277255..17277323,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-423bp_to_ENST00000456355_5end | |||
|cluster_id=chr10:17277255..17277323,- | |||
|coexpression_cluster_id=C490 | |||
|description=CAGE_peak_2_at_ENST00000456355_5end | |||
|id=chr10:17277255..17277323,- | |||
|ontology_enrichment_celltype=CL:0000055!4.06e-29!180;CL:0002371!1.32e-23!591;CL:0000144!3.96e-21!625;CL:0000057!1.06e-17!75;CL:0000048!1.37e-16!430;CL:0000723!3.09e-15!436;CL:0000222!3.63e-14!119;CL:0000034!5.42e-14!444;CL:0000548!8.75e-13!679;CL:0000004!8.75e-13!679;CL:0000255!8.75e-13!679;CL:0000012!1.57e-12!682;CL:0000680!1.53e-10!57;CL:0000056!1.53e-10!57;CL:0000355!1.53e-10!57;CL:0000183!4.61e-10!59;CL:0000187!5.93e-10!54;CL:0000393!1.25e-09!60;CL:0000211!1.25e-09!60;CL:0002620!6.25e-09!23;CL:0000192!9.19e-09!42;CL:0000514!9.19e-09!42;CL:0000003!1.30e-08!722;CL:0002320!2.29e-08!365;CL:0000219!1.28e-07!390;CL:0000359!1.85e-07!32;CL:0000134!3.45e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.80e-09;23!CL:0000057;1.49e-07;73!CL:0000359;1.64e-07;32!CL:0000134;4.38e-07;55!CL:0000192;7.40e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.65e-18,76;CL:0000048,1.67e-17,427;CL:0000723,4.41e-16,433;CL:0000222,6.38e-15,121;CL:0000034,1.14e-14,441;CL:0000680,2.28e-11,58;CL:0000056,2.28e-11,58;CL:0000355,2.28e-11,58;CL:0000187,9.43e-11,55;CL:0000393,7.28e-10,61;CL:0000211,7.28e-10,61;CL:0000192,2.90e-09,43;CL:0000514,2.90e-09,43;CL:0002620,3.22e-09,23;CL:0002320,9.61e-09,361;CL:0000219,6.57e-08,386;CL:0000359,1.08e-07,32;CL:0000134,1.64e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;7.40e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.28e-16!216;UBERON:0000914!3.79e-15!83;UBERON:0002329!3.79e-15!83;UBERON:0003077!3.79e-15!83;UBERON:0003059!3.79e-15!83;UBERON:0007282!3.79e-15!83;UBERON:0009618!3.79e-15!83;UBERON:0007285!3.79e-15!83;UBERON:0004535!4.36e-15!110;UBERON:0002049!7.02e-15!79;UBERON:0007798!7.02e-15!79;UBERON:0002204!1.26e-14!167;UBERON:0001009!2.09e-14!113;UBERON:0004290!1.72e-13!70;UBERON:0004872!4.84e-13!84;UBERON:0000055!5.11e-13!69;UBERON:0001981!2.86e-12!60;UBERON:0007500!2.86e-12!60;UBERON:0004537!2.86e-12!60;UBERON:0006965!2.86e-12!60;UBERON:0000926!1.55e-11!448;UBERON:0004120!1.55e-11!448;UBERON:0006603!1.55e-11!448;UBERON:0000486!1.81e-11!82;UBERON:0001637!7.11e-11!42;UBERON:0003509!7.11e-11!42;UBERON:0004572!7.11e-11!42;UBERON:0001134!4.80e-10!61;UBERON:0002036!4.80e-10!61;UBERON:0003082!4.80e-10!61;UBERON:0002385!1.86e-09!63;UBERON:0001015!1.86e-09!63;UBERON:0000383!1.86e-09!63;UBERON:0004573!1.25e-08!33;UBERON:0004571!1.25e-08!33;UBERON:0002384!1.88e-08!375;UBERON:0005256!9.08e-08!143;UBERON:0003914!1.05e-07!118;UBERON:0002199!1.09e-07!45;UBERON:0002416!1.09e-07!45;UBERON:0000468!2.62e-07!659;UBERON:0001013!5.89e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.50e-08;42!UBERON:0003509;2.50e-08;42!UBERON:0004572;2.50e-08;42!UBERON:0004573;2.74e-08;33!UBERON:0004571;2.74e-08;33!UBERON:0007500;1.74e-07;56!UBERON:0001981;1.74e-07;56!UBERON:0004537;1.74e-07;56!UBERON:0001013;3.80e-07;14!UBERON:0002049;3.95e-07;75!UBERON:0007798;3.95e-07;75!UBERON:0002384;4.57e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.18e-22,315;UBERON:0004120,1.18e-22,315;UBERON:0006603,1.18e-22,315;UBERON:0002204,1.78e-16,167;UBERON:0003081,6.54e-15,203;UBERON:0002049,7.60e-15,78;UBERON:0007798,7.60e-15,78;UBERON:0004535,8.02e-15,109;UBERON:0007503,1.73e-14,78;UBERON:0002329,3.28e-14,71;UBERON:0003059,3.28e-14,71;UBERON:0007282,3.28e-14,71;UBERON:0004290,3.28e-14,71;UBERON:0009618,3.28e-14,71;UBERON:0007524,4.02e-14,73;UBERON:0001009,4.13e-14,112;UBERON:0003077,1.36e-13,72;UBERON:0007285,1.36e-13,72;UBERON:0000055,6.40e-13,68;UBERON:0004872,1.17e-12,83;UBERON:0007500,2.26e-12,59;UBERON:0001981,2.26e-12,59;UBERON:0004537,2.26e-12,59;UBERON:0006965,2.26e-12,59;UBERON:0000486,1.71e-11,83;UBERON:0001637,3.08e-11,42;UBERON:0003509,3.08e-11,42;UBERON:0004572,3.08e-11,42;UBERON:0001134,1.28e-10,62;UBERON:0002036,1.28e-10,62;UBERON:0003082,1.28e-10,62;UBERON:0002385,5.23e-10,64;UBERON:0001015,5.23e-10,64;UBERON:0000383,5.23e-10,64;UBERON:0002384,5.36e-09,371;UBERON:0000490,6.53e-09,148;UBERON:0004573,6.62e-09,33;UBERON:0004571,6.62e-09,33;UBERON:0002199,1.79e-08,46;UBERON:0002416,1.79e-08,46;UBERON:0003914,2.74e-08,117;UBERON:0003104,1.91e-07,160;UBERON:0009142,1.91e-07,160;UBERON:0001013,3.62e-07,14 | |||
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| ||
|short_description=p2@ENST00000456355 | |||
}} | }} |
Latest revision as of 12:17, 23 July 2015
Short description: | p2@ENST00000456355 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000456355_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | -423bp_to_ENST00000456355_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.65e-18 | 76 |
multi fate stem cell | 1.67e-17 | 427 |
somatic stem cell | 4.41e-16 | 433 |
mesodermal cell | 6.38e-15 | 121 |
stem cell | 1.14e-14 | 441 |
muscle precursor cell | 2.28e-11 | 58 |
myoblast | 2.28e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.28e-11 | 58 |
muscle cell | 9.43e-11 | 55 |
electrically responsive cell | 7.28e-10 | 61 |
electrically active cell | 7.28e-10 | 61 |
smooth muscle cell | 2.90e-09 | 43 |
smooth muscle myoblast | 2.90e-09 | 43 |
skin fibroblast | 3.22e-09 | 23 |
connective tissue cell | 9.61e-09 | 361 |
motile cell | 6.57e-08 | 386 |
vascular associated smooth muscle cell | 1.08e-07 | 32 |
mesenchymal cell | 1.64e-07 | 354 |