FFCP PHASE1:Hg19::chr10:18579999..18580012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18579999..18580012,- | |||
|coexpression_cluster_id=C115 | |coexpression_cluster_id=C115 | ||
|description=CAGE_peak_at_chr10:18579999..18580012,- | |description=CAGE_peak_at_chr10:18579999..18580012,- | ||
|id=chr10:18579999..18580012,- | |id=chr10:18579999..18580012,- | ||
|ontology_enrichment_celltype=CL:0000242!1.53e-20!2;CL:0000167!5.05e-11!1;CL:0000164!5.05e-11!1;CL:0000502!5.05e-11!1;CL:0000172!5.05e-11!1;CL:0000173!5.05e-11!1;CL:0002351!5.05e-11!1;CL:0000312!9.01e-09!5;CL:0000240!1.90e-07!6;CL:0000311!1.90e-07!6;CL:0000079!1.90e-07!6;CL:0000237!1.90e-07!6;CL:0000036!1.90e-07!6;CL:0000357!1.90e-07!6;CL:0000114!1.90e-07!6 | |ontology_enrichment_celltype=CL:0000242!1.53e-20!2;CL:0000167!5.05e-11!1;CL:0000164!5.05e-11!1;CL:0000502!5.05e-11!1;CL:0000172!5.05e-11!1;CL:0000173!5.05e-11!1;CL:0002351!5.05e-11!1;CL:0000312!9.01e-09!5;CL:0000240!1.90e-07!6;CL:0000311!1.90e-07!6;CL:0000079!1.90e-07!6;CL:0000237!1.90e-07!6;CL:0000036!1.90e-07!6;CL:0000357!1.90e-07!6;CL:0000114!1.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.34e-40;2!CL:0000242;1.34e-40;2!CL:0000167;7.72e-21;1!CL:0000164;7.72e-21;1!CL:0000502;7.72e-21;1!CL:0000172;7.72e-21;1!CL:0000173;7.72e-21;1!CL:0000312;6.40e-17;5!CL:0000240;2.85e-14;6!CL:0000311;2.85e-14;6!CL:0000079;2.85e-14;6!CL:0000237;2.85e-14;6!CL:0002535;2.47e-11;2!CL:0000362;7.74e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.64e-40,2;CL:0000167,6.31e-21,1;CL:0000164,6.31e-21,1;CL:0000502,6.31e-21,1;CL:0000172,6.31e-21,1;CL:0000173,6.31e-21,1;CL:0002351,6.31e-21,1;CL:0000312,6.94e-17,5;CL:0000240,3.04e-14,6;CL:0000311,3.04e-14,6;CL:0000079,3.04e-14,6;CL:0000237,3.04e-14,6;CL:0000036,3.04e-14,6;CL:0000357,3.04e-14,6;CL:0000114,3.04e-14,6;CL:0002535,2.47e-11,2;CL:0000362,8.09e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002351;7.72e-21;1!CL:0000357;2.85e-14;6!CL:0000114;2.85e-14;6 | |||
|ontology_enrichment_disease=DOID:2355!3.76e-11!1;DOID:4430!5.05e-11!1 | |ontology_enrichment_disease=DOID:2355!3.76e-11!1;DOID:4430!5.05e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;4.22e-21;1!DOID:4430;7.72e-21;1!DOID:74;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.45e-21,1;DOID:4430,6.31e-21,1;DOID:74,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0003296!6.64e-39!4;UBERON:0010133!6.64e-39!4;UBERON:0001894!2.18e-22!7;UBERON:0006222!2.18e-22!7;UBERON:0000007!7.70e-21!2;UBERON:0001905!6.54e-20!2;UBERON:0002757!6.54e-20!2;UBERON:0010134!6.54e-20!2;UBERON:0002784!6.54e-20!2;UBERON:0005408!6.54e-20!2;UBERON:0001899!6.54e-20!2;UBERON:0002240!2.49e-13!3;UBERON:0001049!5.78e-12!57;UBERON:0005068!5.78e-12!57;UBERON:0006241!5.78e-12!57;UBERON:0007135!5.78e-12!57;UBERON:0007023!8.96e-12!115;UBERON:0001736!6.77e-11!1;UBERON:0006298!6.77e-11!1;UBERON:0002780!2.17e-10!41;UBERON:0001890!2.17e-10!41;UBERON:0006240!2.17e-10!41;UBERON:0003080!3.93e-10!42;UBERON:0003075!2.27e-09!86;UBERON:0007284!2.27e-09!86;UBERON:0005743!3.01e-09!86;UBERON:0002346!6.78e-09!90;UBERON:0003056!8.30e-09!61;UBERON:0004121!1.47e-08!169;UBERON:0000349!2.08e-08!5;UBERON:0005174!2.33e-08!5;UBERON:0001137!2.33e-08!5;UBERON:0000924!2.60e-08!173;UBERON:0006601!2.60e-08!173;UBERON:0000073!2.97e-08!94;UBERON:0001016!2.97e-08!94;UBERON:0001017!6.99e-08!82;UBERON:0001044!2.37e-07!6;UBERON:0003293!2.37e-07!6;UBERON:0003294!2.37e-07!6;UBERON:0010047!2.37e-07!6;UBERON:0000167!2.37e-07!6;UBERON:0002616!4.69e-07!59 | |ontology_enrichment_uberon=UBERON:0003296!6.64e-39!4;UBERON:0010133!6.64e-39!4;UBERON:0001894!2.18e-22!7;UBERON:0006222!2.18e-22!7;UBERON:0000007!7.70e-21!2;UBERON:0001905!6.54e-20!2;UBERON:0002757!6.54e-20!2;UBERON:0010134!6.54e-20!2;UBERON:0002784!6.54e-20!2;UBERON:0005408!6.54e-20!2;UBERON:0001899!6.54e-20!2;UBERON:0002240!2.49e-13!3;UBERON:0001049!5.78e-12!57;UBERON:0005068!5.78e-12!57;UBERON:0006241!5.78e-12!57;UBERON:0007135!5.78e-12!57;UBERON:0007023!8.96e-12!115;UBERON:0001736!6.77e-11!1;UBERON:0006298!6.77e-11!1;UBERON:0002780!2.17e-10!41;UBERON:0001890!2.17e-10!41;UBERON:0006240!2.17e-10!41;UBERON:0003080!3.93e-10!42;UBERON:0003075!2.27e-09!86;UBERON:0007284!2.27e-09!86;UBERON:0005743!3.01e-09!86;UBERON:0002346!6.78e-09!90;UBERON:0003056!8.30e-09!61;UBERON:0004121!1.47e-08!169;UBERON:0000349!2.08e-08!5;UBERON:0005174!2.33e-08!5;UBERON:0001137!2.33e-08!5;UBERON:0000924!2.60e-08!173;UBERON:0006601!2.60e-08!173;UBERON:0000073!2.97e-08!94;UBERON:0001016!2.97e-08!94;UBERON:0001017!6.99e-08!82;UBERON:0001044!2.37e-07!6;UBERON:0003293!2.37e-07!6;UBERON:0003294!2.37e-07!6;UBERON:0010047!2.37e-07!6;UBERON:0000167!2.37e-07!6;UBERON:0002616!4.69e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.99e-41;2!UBERON:0003296;3.82e-21;4!UBERON:0010133;3.82e-21;4!UBERON:0001894;1.59e-12;7!UBERON:0006955;2.47e-11;2!UBERON:0004801;2.47e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.99e-41,2;UBERON:0003296,3.82e-21,4;UBERON:0010133,3.82e-21,4;UBERON:0001894,1.59e-12,7;UBERON:0006222,1.59e-12,7;UBERON:0006955,2.47e-11,2;UBERON:0004801,2.47e-11,2 | |||
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|short_description=p@chr10:18579999..18580012,- | |short_description=p@chr10:18579999..18580012,- | ||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18579999..18580012, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18579999..18580012, - |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.64e-40 | 2 |
peptide hormone secreting cell | 6.31e-21 | 1 |
enteroendocrine cell | 6.31e-21 | 1 |
type D enteroendocrine cell | 6.31e-21 | 1 |
somatostatin secreting cell | 6.31e-21 | 1 |
pancreatic D cell | 6.31e-21 | 1 |
progenitor cell of endocrine pancreas | 6.31e-21 | 1 |
keratinocyte | 6.94e-17 | 5 |
stratified squamous epithelial cell | 3.04e-14 | 6 |
keratin accumulating cell | 3.04e-14 | 6 |
stratified epithelial cell | 3.04e-14 | 6 |
keratinizing barrier epithelial cell | 3.04e-14 | 6 |
epithelial fate stem cell | 3.04e-14 | 6 |
stratified epithelial stem cell | 3.04e-14 | 6 |
surface ectodermal cell | 3.04e-14 | 6 |
epithelial cell of cervix | 2.47e-11 | 2 |
epidermal cell | 8.09e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.99e-41 | 2 |
gland of diencephalon | 3.82e-21 | 4 |
neuroendocrine gland | 3.82e-21 | 4 |
diencephalon | 1.59e-12 | 7 |
future diencephalon | 1.59e-12 | 7 |
uterine epithelium | 2.47e-11 | 2 |
cervix epithelium | 2.47e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.45e-21 | 1 |
somatostatinoma | 6.31e-21 | 1 |
hematopoietic system disease | 2.73e-11 | 2 |