FFCP PHASE1:Hg19::chr10:21816148..21816172,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21816148..21816172,- | |||
|description=CAGE_peak_at_chr10:21816148..21816172,- | |description=CAGE_peak_at_chr10:21816148..21816172,- | ||
|id=chr10:21816148..21816172,- | |id=chr10:21816148..21816172,- | ||
|ontology_enrichment_celltype=CL:0000115!9.61e-11!35;CL:0002139!1.29e-08!24;CL:0000071!1.30e-08!18;CL:0002546!1.30e-08!18;CL:0002078!1.36e-08!44;CL:0000213!7.78e-07!57;CL:0000215!7.78e-07!57 | |ontology_enrichment_celltype=CL:0000115!9.61e-11!35;CL:0002139!1.29e-08!24;CL:0000071!1.30e-08!18;CL:0002546!1.30e-08!18;CL:0002078!1.36e-08!44;CL:0000213!7.78e-07!57;CL:0000215!7.78e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000071;3.06e-17;18!CL:0000540;2.77e-14;6!CL:0000404;2.77e-14;6!CL:0002139;1.30e-12;24!CL:0000115;1.60e-12;36!CL:0002262;6.41e-11;2!CL:1000398;6.41e-11;2!CL:0002322;9.34e-10;5!CL:0002078;8.56e-09;45!CL:0002543;1.58e-08;6!CL:0002144;1.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.99e-17,18;CL:0002546,1.99e-17,18;CL:0000115,3.87e-15,36;CL:0000540,3.31e-14,6;CL:0000031,3.31e-14,6;CL:0000404,3.31e-14,6;CL:0002139,9.46e-13,24;CL:0002078,1.12e-11,45;CL:0002262,4.76e-11,2;CL:1000398,4.76e-11,2;CL:0000047,1.12e-10,8;CL:0002322,6.16e-10,5;CL:0002543,1.17e-08,6;CL:0000213,1.39e-08,58;CL:0000215,1.39e-08,58;CL:0002144,1.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.06e-17;18!CL:0000031;2.77e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.30e-08!18;UBERON:0004638!1.30e-08!18;UBERON:0004852!1.30e-08!18;UBERON:0000487!1.26e-07!22;UBERON:0006914!7.90e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.06e-17;18!UBERON:0001986;3.06e-17;18!UBERON:0004852;3.06e-17;18!UBERON:0000487;7.09e-14;22!UBERON:0006914;4.65e-12;25!UBERON:0001281;6.41e-11;2!UBERON:0003497;6.41e-11;2!UBERON:0003909;6.41e-11;2!UBERON:0003835;6.41e-11;2!UBERON:0000490;6.86e-11;33!UBERON:0010523;1.47e-07;3!UBERON:0001915;1.47e-07;3!UBERON:0001280;1.47e-07;3!UBERON:0004647;1.47e-07;3!UBERON:0001982;1.47e-07;3!UBERON:0007500;4.96e-07;56!UBERON:0001981;4.96e-07;56!UBERON:0004537;4.96e-07;56!UBERON:0003513;6.45e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.99e-17,18;UBERON:0001986,1.99e-17,18;UBERON:0004852,1.99e-17,18;UBERON:0000487,5.02e-14,22;UBERON:0006914,3.45e-12,25;UBERON:0001281,4.76e-11,2;UBERON:0003497,4.76e-11,2;UBERON:0003909,4.76e-11,2;UBERON:0003835,4.76e-11,2;UBERON:0007500,3.60e-10,59;UBERON:0001981,3.60e-10,59;UBERON:0004537,3.60e-10,59;UBERON:0006965,3.60e-10,59;UBERON:0003914,8.64e-09,117;UBERON:0000055,1.65e-08,68;UBERON:0004872,8.99e-08,83;UBERON:0001280,1.21e-07,3;UBERON:0004647,1.21e-07,3;UBERON:0005171,1.21e-07,3;UBERON:0010523,1.43e-07,3;UBERON:0001915,1.43e-07,3;UBERON:0001982,1.43e-07,3;UBERON:0002049,4.05e-07,78;UBERON:0007798,4.05e-07,78;UBERON:0003513,4.73e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0.547497700291537,0.87879847716362,0.152826811495903,0.164201178899891,0.314843125254717,0,0.383829398097213,0,0.919421224478927,0.6024118375565,0,0.154934401160603,0.142169232487422,0.880801318004542,0,0.401088894940283,0.651032612147555,0,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.727752183563449,0,0,0.619412741790207,0.28769239232215,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0,0.953962497221368,0,0.371457501329565,0.596287222100115,2.58070378531837,0.347140501607594,2.26123176769604,1.67799774483962,0.550236083880135,0.835979866147242,0.258416759169329,0.71153252537342,0,1.20848795132744,0,1.46437234528902,0.367663080345869,0.81014194788176,0.267899184852239,0,0.337834441449967,3.06633274931766,3.79706263827252,1.83201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0.309977343527296,0,0,0,0.718618141816238,0,0.250237039743928,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0.573609190778008,2.6834215348511,1.98794652482228,0.929551542956147,0.414644220061482,1.26160425437814,1.45990943630332,0,0,1.38134921352481,0,0,0.709840800239063,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0.231860809950154,0.117408694235822,0.577465791044295,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0.432359860250884,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.61642896765115,0.358121926479791,0.112085143993527,0.197030760201927,0.431255149719035,0.256686072559497,0.254094624222463,0,0,1.17261385734044,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,1.48418066444991,0.308419387605311,0,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0,0.131124414959424,0.451199612907412,0.0770153371044148,2.35304930753057,0,0.211103257785751,1.13733384070897,0.510281115829547,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.0915694648183434,0.330037999682352,0,0,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.429680979473094,0.435050081742686,0.170453254832202,0.178064071293475,0,0.192190067365106,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0,0,0,0,0.318203247925937,1.56989728039846,0.179872457583315,0,0.235624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,1.65409603063837,0,0,0,0,0.405820753925408,0.6196469961995,0,0.286822704408103,0,0,0.709522128141196,0,0,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0.371606350251437,0.144269212976445,0,0.159426272728822,0,0.383010740264733,0,0.324621940274555,0,0.684704037099577,0,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0.556812347790485,0,0,0,1.4098700508785,0,0,0.849523652246594,0,0.568272293612826,0.47748896947538,0,0,0,0.703347082052564,0.111308705022906,0.824019371133798,2.32237948940793,0.19924798825107,0,0,0.306806047506464,0,0,0,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0.227586896570999,0,0,0,0,1.56262495439963,0,0,0,0.774054819518572,0,0,0.32681539055697,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0.869178975376065,0,0,0,0,0.627921025580099,0,0.225595660617181,0.19606253431774,0.167821586975843,0.189753732724185,0.635746315921515,0,0.489698424477443,0.706765357169704,0,0,0,0,0.2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| ||
|short_description=p@chr10:21816148..21816172,- | |short_description=p@chr10:21816148..21816172,- | ||
}} | }} |
Latest revision as of 12:32, 23 July 2015
Short description: | p@chr10:21816148..21816172, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21816148..21816172, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.99e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.99e-17 | 18 |
endothelial cell | 3.87e-15 | 36 |
neuron | 3.31e-14 | 6 |
neuroblast | 3.31e-14 | 6 |
electrically signaling cell | 3.31e-14 | 6 |
endothelial cell of vascular tree | 9.46e-13 | 24 |
meso-epithelial cell | 1.12e-11 | 45 |
endothelial cell of sinusoid | 4.76e-11 | 2 |
endothelial cell of hepatic sinusoid | 4.76e-11 | 2 |
neuronal stem cell | 1.12e-10 | 8 |
embryonic stem cell | 6.16e-10 | 5 |
vein endothelial cell | 1.17e-08 | 6 |
lining cell | 1.39e-08 | 58 |
barrier cell | 1.39e-08 | 58 |
capillary endothelial cell | 1.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.99e-17 | 18 |
endothelium | 1.99e-17 | 18 |
cardiovascular system endothelium | 1.99e-17 | 18 |
simple squamous epithelium | 5.02e-14 | 22 |
squamous epithelium | 3.45e-12 | 25 |
hepatic sinusoid | 4.76e-11 | 2 |
abdomen blood vessel | 4.76e-11 | 2 |
sinusoid | 4.76e-11 | 2 |
abdominal segment blood vessel | 4.76e-11 | 2 |
epithelial tube open at both ends | 3.60e-10 | 59 |
blood vessel | 3.60e-10 | 59 |
blood vasculature | 3.60e-10 | 59 |
vascular cord | 3.60e-10 | 59 |
epithelial tube | 8.64e-09 | 117 |
vessel | 1.65e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 8.99e-08 | 83 |
liver parenchyma | 1.21e-07 | 3 |
liver lobule | 1.21e-07 | 3 |
hepatic duct | 1.21e-07 | 3 |
microcirculatory vessel | 1.43e-07 | 3 |
endothelium of capillary | 1.43e-07 | 3 |
capillary | 1.43e-07 | 3 |
vasculature | 4.05e-07 | 78 |
vascular system | 4.05e-07 | 78 |
trunk blood vessel | 4.73e-07 | 7 |