FFCP PHASE1:Hg19::chr10:30847379..30847383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30847379..30847383,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_at_chr10:30847379..30847383,- | |description=CAGE_peak_at_chr10:30847379..30847383,- | ||
|id=chr10:30847379..30847383,- | |id=chr10:30847379..30847383,- | ||
|ontology_enrichment_celltype=CL:0002623!6.27e-07!3 | |ontology_enrichment_celltype=CL:0002623!6.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;9.97e-44;3!CL:0000622;1.46e-26;5!CL:0002322;1.05e-25;5!CL:0000154;2.93e-22;6!CL:0000946;1.24e-15;1!CL:0000786;1.24e-15;1!CL:0000150;4.57e-15;9!CL:0002321;5.37e-09;15!CL:0000082;2.13e-07;19!CL:0002251;4.38e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.07e-43,3;CL:0000622,1.53e-26,5;CL:0002322,1.30e-25,5;CL:0000154,3.04e-22,6;CL:0000946,9.99e-16,1;CL:0000786,9.99e-16,1;CL:0000980,9.99e-16,1;CL:0000150,4.68e-15,9;CL:0000785,1.61e-08,2;CL:0000955,1.61e-08,2;CL:0000818,1.61e-08,2;CL:0000954,1.61e-08,2;CL:0000816,1.61e-08,2;CL:0000082,2.18e-07,19;CL:0002251,4.43e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000954;1.79e-08;2!UBERON:0001041;6.84e-08;30 | |||
|ontology_enrichment_disease=DOID:162!1.20e-11!235;DOID:14566!4.58e-11!239;DOID:0050686!1.50e-09!137;DOID:0050687!7.02e-08!143 | |ontology_enrichment_disease=DOID:162!1.20e-11!235;DOID:14566!4.58e-11!239;DOID:0050686!1.50e-09!137;DOID:0050687!7.02e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5409;2.14e-15;4!DOID:3905;5.40e-15;9!DOID:1324;3.12e-09;15!DOID:1325;3.37e-09;7!DOID:3904;3.37e-09;7!DOID:0050615;1.09e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.07e-15,4;DOID:3905,5.66e-15,9;DOID:1324,3.21e-09,15;DOID:1325,3.30e-09,7;DOID:3904,3.30e-09,7;DOID:0050615,1.12e-08,16 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.93e-22;6!UBERON:0003293;2.93e-22;6!UBERON:0003294;2.93e-22;6!UBERON:0010047;2.93e-22;6!UBERON:0003408;2.93e-22;6!UBERON:0000167;2.93e-22;6!UBERON:0001041;6.73e-10;14!UBERON:0002365;1.29e-07;31!UBERON:0002330;1.29e-07;31!UBERON:0000161;1.97e-07;19!UBERON:0000166;1.97e-07;19!UBERON:0004802;2.13e-07;19!UBERON:0000115;2.13e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,3.04e-22,6;UBERON:0003293,3.04e-22,6;UBERON:0003294,3.04e-22,6;UBERON:0010047,3.04e-22,6;UBERON:0000167,3.04e-22,6;UBERON:0003408,1.30e-13,10;UBERON:0002365,1.18e-07,31;UBERON:0002330,1.18e-07,31;UBERON:0001041,1.50e-07,87;UBERON:0004802,2.18e-07,19;UBERON:0000115,2.18e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,1.70763188581434,1.32529768321485,1.04574548582567,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.508507300585533,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.207376382794494,0,0.661983911750998,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,1.88754497648161,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.720599767084807,0,0.157566364614447,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,2.15144807199414,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.226624183040251,0,1.32506888912221,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0,5.94899130225792,0.499921631848426,0,0,0,0,0.28984205722165,0,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0,0.212574920101683,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,3.52267479077163,2.21934020222135,8.2951159417691,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0.243835849964539,0,0,0,0.971421986118279,0,0,2.61624199710651,0,7.58589565543461,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0.437062287854782,0.126698501011437,0,0,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p@chr10:30847379..30847383,- | |short_description=p@chr10:30847379..30847383,- | ||
}} | }} |
Latest revision as of 13:09, 23 July 2015
Short description: | p@chr10:30847379..30847383, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30847379..30847383, - |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.07e-43 | 3 |
acinar cell | 1.53e-26 | 5 |
embryonic stem cell | 1.30e-25 | 5 |
protein secreting cell | 3.04e-22 | 6 |
antibody secreting cell | 9.99e-16 | 1 |
plasma cell | 9.99e-16 | 1 |
plasmablast | 9.99e-16 | 1 |
glandular epithelial cell | 4.68e-15 | 9 |
mature B cell | 1.61e-08 | 2 |
pre-B-II cell | 1.61e-08 | 2 |
transitional stage B cell | 1.61e-08 | 2 |
small pre-B-II cell | 1.61e-08 | 2 |
immature B cell | 1.61e-08 | 2 |
epithelial cell of lung | 2.18e-07 | 19 |
epithelial cell of alimentary canal | 4.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 3.04e-22 | 6 |
gland of oral region | 3.04e-22 | 6 |
gland of foregut | 3.04e-22 | 6 |
oral gland | 3.04e-22 | 6 |
oral cavity | 3.04e-22 | 6 |
gland of gut | 1.30e-13 | 10 |
exocrine gland | 1.18e-07 | 31 |
exocrine system | 1.18e-07 | 31 |
foregut | 1.50e-07 | 87 |
respiratory tract epithelium | 2.18e-07 | 19 |
lung epithelium | 2.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.07e-15 | 4 |
lung carcinoma | 5.66e-15 | 9 |
lung cancer | 3.21e-09 | 15 |
bronchus cancer | 3.30e-09 | 7 |
bronchogenic carcinoma | 3.30e-09 | 7 |
respiratory system cancer | 1.12e-08 | 16 |