FFCP PHASE1:Hg19::chr10:33218785..33218853,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:33218785..33218853,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_at_chr10:33218785..33218853,- | |||
|id=chr10:33218785..33218853,- | |||
|ontology_enrichment_celltype=CL:0000055!9.82e-15!180;CL:0000057!2.03e-10!75;CL:0000548!3.21e-10!679;CL:0000004!3.21e-10!679;CL:0000255!3.21e-10!679;CL:0000012!2.31e-09!682;CL:0000680!8.90e-09!57;CL:0000056!8.90e-09!57;CL:0000355!8.90e-09!57;CL:0000220!1.15e-08!246;CL:0002321!1.41e-08!248;CL:0000144!2.97e-08!625;CL:0002371!5.65e-08!591;CL:0000222!8.66e-08!119;CL:0000187!1.02e-07!54;CL:0000192!4.46e-07!42;CL:0000514!4.46e-07!42;CL:0000723!5.39e-07!436;CL:0000393!8.96e-07!60;CL:0000211!8.96e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.01e-07;55!CL:0002334;4.55e-07;12!CL:0000359;8.08e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.54e-13,76;CL:0000723,2.96e-10,433;CL:0000048,6.79e-10,427;CL:0000680,1.82e-09,58;CL:0000056,1.82e-09,58;CL:0000355,1.82e-09,58;CL:0002321,2.12e-09,250;CL:0000034,3.21e-09,441;CL:0000222,5.22e-09,121;CL:0000187,2.66e-08,55;CL:0000192,4.14e-08,43;CL:0000514,4.14e-08,43;CL:0000359,3.13e-07,32;CL:0002334,5.33e-07,12;CL:0000393,7.47e-07,61;CL:0000211,7.47e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.57e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.78e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.25e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.08e-10!83;UBERON:0002329!3.08e-10!83;UBERON:0003077!3.08e-10!83;UBERON:0003059!3.08e-10!83;UBERON:0007282!3.08e-10!83;UBERON:0009618!3.08e-10!83;UBERON:0007285!3.08e-10!83;UBERON:0004290!8.82e-09!70;UBERON:0001134!1.50e-08!61;UBERON:0002036!1.50e-08!61;UBERON:0003082!1.50e-08!61;UBERON:0000486!2.00e-08!82;UBERON:0002385!2.39e-08!63;UBERON:0001015!2.39e-08!63;UBERON:0000383!2.39e-08!63;UBERON:0000926!4.57e-08!448;UBERON:0004120!4.57e-08!448;UBERON:0006603!4.57e-08!448;UBERON:0003102!5.58e-07!95;UBERON:0002199!6.97e-07!45;UBERON:0002416!6.97e-07!45;UBERON:0005256!7.20e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,7.13e-09,73;UBERON:0001134,7.15e-09,62;UBERON:0002036,7.15e-09,62;UBERON:0003082,7.15e-09,62;UBERON:0002329,7.92e-09,71;UBERON:0003059,7.92e-09,71;UBERON:0007282,7.92e-09,71;UBERON:0004290,7.92e-09,71;UBERON:0009618,7.92e-09,71;UBERON:0002385,1.25e-08,64;UBERON:0001015,1.25e-08,64;UBERON:0000383,1.25e-08,64;UBERON:0000926,1.83e-08,315;UBERON:0004120,1.83e-08,315;UBERON:0006603,1.83e-08,315;UBERON:0003077,1.92e-08,72;UBERON:0007285,1.92e-08,72;UBERON:0003102,2.02e-08,99;UBERON:0000486,2.09e-08,83;UBERON:0002199,3.02e-07,46;UBERON:0002416,3.02e-07,46;UBERON:0005256,4.77e-07,122;UBERON:0007503,5.54e-07,78;UBERON:0001637,8.19e-07,42;UBERON:0003509,8.19e-07,42;UBERON:0004572,8.19e-07,42 | |||
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| |||
|short_description=p@chr10:33218785..33218853,- | |||
}} |
Latest revision as of 13:18, 23 July 2015
Short description: | p@chr10:33218785..33218853, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33218785..33218853, - |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.54e-13 | 76 |
somatic stem cell | 2.96e-10 | 433 |
multi fate stem cell | 6.79e-10 | 427 |
muscle precursor cell | 1.82e-09 | 58 |
myoblast | 1.82e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.82e-09 | 58 |
embryonic cell | 2.12e-09 | 250 |
stem cell | 3.21e-09 | 441 |
mesodermal cell | 5.22e-09 | 121 |
muscle cell | 2.66e-08 | 55 |
smooth muscle cell | 4.14e-08 | 43 |
smooth muscle myoblast | 4.14e-08 | 43 |
vascular associated smooth muscle cell | 3.13e-07 | 32 |
preadipocyte | 5.33e-07 | 12 |
electrically responsive cell | 7.47e-07 | 61 |
electrically active cell | 7.47e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 7.13e-09 | 73 |
skeletal muscle tissue | 7.15e-09 | 62 |
striated muscle tissue | 7.15e-09 | 62 |
myotome | 7.15e-09 | 62 |
somite | 7.92e-09 | 71 |
presomitic mesoderm | 7.92e-09 | 71 |
presumptive segmental plate | 7.92e-09 | 71 |
dermomyotome | 7.92e-09 | 71 |
trunk paraxial mesoderm | 7.92e-09 | 71 |
muscle tissue | 1.25e-08 | 64 |
musculature | 1.25e-08 | 64 |
musculature of body | 1.25e-08 | 64 |
mesoderm | 1.83e-08 | 315 |
mesoderm-derived structure | 1.83e-08 | 315 |
presumptive mesoderm | 1.83e-08 | 315 |
paraxial mesoderm | 1.92e-08 | 72 |
presumptive paraxial mesoderm | 1.92e-08 | 72 |
surface structure | 2.02e-08 | 99 |
multilaminar epithelium | 2.09e-08 | 83 |
integument | 3.02e-07 | 46 |
integumental system | 3.02e-07 | 46 |
trunk mesenchyme | 4.77e-07 | 122 |
epithelial vesicle | 5.54e-07 | 78 |
artery | 8.19e-07 | 42 |
arterial blood vessel | 8.19e-07 | 42 |
arterial system | 8.19e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.25e-08 | 14 |