FFCP PHASE1:Hg19::chr10:3954276..3954287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3954276..3954287,+ | |||
|coexpression_cluster_id=C3015 | |coexpression_cluster_id=C3015 | ||
|description=CAGE_peak_at_chr10:3954276..3954287,+ | |description=CAGE_peak_at_chr10:3954276..3954287,+ | ||
|id=chr10:3954276..3954287,+ | |id=chr10:3954276..3954287,+ | ||
|ontology_enrichment_celltype=CL:0000244;2.03e-72;4!CL:0000731;2.03e-72;4!CL:0002541;2.86e-54;3!CL:0000349;3.57e-09;19 | |ontology_enrichment_celltype=CL:0000244!1.21e-20!4;CL:0000731!1.21e-20!4;CL:0002541!7.56e-16!3;CL:0002621!2.80e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000244;2.03e-72;4!CL:0000731;2.03e-72;4!CL:0002541;2.86e-54;3!CL:0000349;3.57e-09;19 | ||
|ontology_enrichment_disease=DOID:1799;3.91e-19;1!DOID:10165;3.91e-19;1!DOID:1798;3.91e-19;1 | |ontology_enrichment_celltype_v019_2=CL:0000244,2.68e-72,4;CL:0000731,2.68e-72,4;CL:0002541,2.17e-54,3;CL:0000349,3.43e-09,19 | ||
|ontology_enrichment_uberon=UBERON:0000365;4.48e-58;5!UBERON:0003124;2.86e-54;3!UBERON:0000920;2.86e-54;3!UBERON:0005910;1.66e-48;6!UBERON:0001896;7.46e-25;3!UBERON:0005290;7.46e-25;3!UBERON:0000486;1.56e-24;12!UBERON:0005631;7.48e-17;10!UBERON:0000158;7.48e-17;10!UBERON:0002298;5.94e-13;6!UBERON:0006554;4.80e-10;30!UBERON:0001008;4.80e-10;30!UBERON:0000478;2.23e-07;24!UBERON:0004733;6.26e-07;12!UBERON:0002028;6.26e-07;12 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.91e-19;1!DOID:10165;3.91e-19;1!DOID:1798;3.91e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,5.62e-19,1;DOID:10165,5.62e-19,1;DOID:1798,5.62e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!1.54e-16!5;UBERON:0000476!7.56e-16!3;UBERON:0000920!7.56e-16!3;UBERON:0001896!4.53e-15!3;UBERON:0005290!4.53e-15!3;UBERON:0010096!4.53e-15!3;UBERON:0005910!8.52e-14!6;UBERON:0003124!2.07e-11!7;UBERON:0005631!1.93e-08!14;UBERON:0000158!1.93e-08!14;UBERON:0007023!1.09e-07!115;UBERON:0001949!2.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.48e-58;5!UBERON:0003124;2.86e-54;3!UBERON:0000920;2.86e-54;3!UBERON:0005910;1.66e-48;6!UBERON:0001896;7.46e-25;3!UBERON:0005290;7.46e-25;3!UBERON:0000486;1.56e-24;12!UBERON:0005631;7.48e-17;10!UBERON:0000158;7.48e-17;10!UBERON:0002298;5.94e-13;6!UBERON:0006554;4.80e-10;30!UBERON:0001008;4.80e-10;30!UBERON:0000478;2.23e-07;24!UBERON:0004733;6.26e-07;12!UBERON:0002028;6.26e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.58e-58,5;UBERON:0000920,2.17e-54,3;UBERON:0005910,1.99e-48,6;UBERON:0001896,5.50e-25,3;UBERON:0005290,5.50e-25,3;UBERON:0010096,5.50e-25,3;UBERON:0003124,8.36e-24,7;UBERON:0002298,5.11e-13,6;UBERON:0005631,2.95e-12,14;UBERON:0000158,2.95e-12,14;UBERON:0000478,2.15e-07,24;UBERON:0004733,5.81e-07,12;UBERON:0002028,5.81e-07,12;UBERON:0007277,5.81e-07,12 | |||
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|short_description=p@chr10:3954276..3954287,+ | |short_description=p@chr10:3954276..3954287,+ | ||
}} | }} |
Latest revision as of 13:39, 23 July 2015
Short description: | p@chr10:3954276..3954287, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3954276..3954287, + |
Coexpression cluster: | C3015_Urothelial_chorionic_medulla_choriocarcinoma_Small_pancreatic_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 2.68e-72 | 4 |
urothelial cell | 2.68e-72 | 4 |
chorionic membrane mesenchymal stem cell | 2.17e-54 | 3 |
extraembryonic cell | 3.43e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 5.58e-58 | 5 |
egg chorion | 2.17e-54 | 3 |
transitional epithelium | 1.99e-48 | 6 |
medulla oblongata | 5.50e-25 | 3 |
myelencephalon | 5.50e-25 | 3 |
future myelencephalon | 5.50e-25 | 3 |
chorion | 8.36e-24 | 7 |
brainstem | 5.11e-13 | 6 |
extraembryonic membrane | 2.95e-12 | 14 |
membranous layer | 2.95e-12 | 14 |
extraembryonic structure | 2.15e-07 | 24 |
segmental subdivision of hindbrain | 5.81e-07 | 12 |
hindbrain | 5.81e-07 | 12 |
presumptive hindbrain | 5.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 5.62e-19 | 1 |
endocrine pancreas cancer | 5.62e-19 | 1 |
pancreatic endocrine carcinoma | 5.62e-19 | 1 |