FFCP PHASE1:Hg19::chr10:54215029..54215039,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000435813,uc001jjs.2_5end | |association_with_transcript=0bp_to_ENST00000435813,uc001jjs.2_5end | ||
|cluster_id=chr10:54215029..54215039,- | |||
|coexpression_cluster_id=C1315 | |||
|description=CAGE_peak_5_at_ENST00000435813_5end,CAGE_peak_5_at_uc001jjs.2_5end | |description=CAGE_peak_5_at_ENST00000435813_5end,CAGE_peak_5_at_uc001jjs.2_5end | ||
|id=chr10:54215029..54215039,- | |id=chr10:54215029..54215039,- | ||
|ontology_enrichment_celltype=CL:0002076!1.08e-14!43;CL:0000066!1.02e-13!254;CL:0000223!1.95e-12!59;CL:0000076!5.09e-12!62;CL:0002620!1.07e-09!23;CL:0002251!1.31e-09!21;CL:0002231!4.59e-09!3;CL:0000243!7.23e-08!15;CL:0000125!7.23e-08!15;CL:0000030!7.23e-08!15;CL:0000339!7.23e-08!15;CL:0000095!6.43e-07!17;CL:0000123!6.43e-07!17 | |ontology_enrichment_celltype=CL:0002076!1.08e-14!43;CL:0000066!1.02e-13!254;CL:0000223!1.95e-12!59;CL:0000076!5.09e-12!62;CL:0002620!1.07e-09!23;CL:0002251!1.31e-09!21;CL:0002231!4.59e-09!3;CL:0000243!7.23e-08!15;CL:0000125!7.23e-08!15;CL:0000030!7.23e-08!15;CL:0000339!7.23e-08!15;CL:0000095!6.43e-07!17;CL:0000123!6.43e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000243;4.78e-14;15!CL:0000125;4.78e-14;15!CL:0000095;1.64e-12;17!CL:0002573;1.07e-09;2!CL:0002319;1.22e-08;25!CL:0002251;3.43e-08;20!CL:0000076;2.23e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.99e-14,15;CL:0000125,3.99e-14,15;CL:0000030,3.99e-14,15;CL:0000339,3.99e-14,15;CL:0000076,4.42e-13,63;CL:0000095,1.39e-12,17;CL:0000123,1.39e-12,17;CL:0002573,7.85e-10,2;CL:0002319,1.09e-08,25;CL:0002251,3.10e-08,20;CL:0000066,1.68e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000339;4.78e-14;15!UBERON:0006238;2.01e-10;10 | |||
|ontology_enrichment_disease=DOID:1749!1.34e-28!14;DOID:305!7.00e-13!106;DOID:14566!1.90e-11!239;DOID:7!2.46e-11!39;DOID:0050687!2.82e-10!143;DOID:162!2.95e-10!235;DOID:299!8.18e-08!25;DOID:5093!3.45e-07!4;DOID:1612!3.45e-07!4;DOID:4074!7.15e-07!2;DOID:4905!7.15e-07!2;DOID:3498!7.15e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.53e-46;14!DOID:3093;1.46e-09;11!DOID:3111;1.97e-08;1!DOID:3603;1.97e-08;1!DOID:3151;6.85e-08;1!DOID:3149;6.85e-08;1!DOID:7;1.99e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.53e-46,14;DOID:14566,4.59e-17,239;DOID:305,7.21e-15,106;DOID:162,1.42e-14,235;DOID:0050687,3.76e-10,143;DOID:7,6.81e-10,39;DOID:3093,1.43e-09,11;DOID:3111,2.04e-08,1;DOID:3603,2.04e-08,1;DOID:3151,1.21e-07,1;DOID:3149,1.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.29e-18!12;UBERON:0003729!4.88e-15!5;UBERON:0003343!6.53e-13!4;UBERON:0004785!6.53e-13!4;UBERON:0003102!1.18e-11!95;UBERON:0002097!1.66e-08!40;UBERON:0000161!1.18e-07!35;UBERON:0002199!2.94e-07!45;UBERON:0002416!2.94e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.31e-27;4!UBERON:0004785;4.31e-27;4!UBERON:0000974;3.78e-18;6!UBERON:0000344;1.19e-11;20!UBERON:0003729;1.85e-08;13!UBERON:0000997;6.85e-08;1!UBERON:0005056;6.85e-08;1!UBERON:0004176;6.85e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.80e-27,4;UBERON:0004785,1.80e-27,4;UBERON:0000344,1.06e-11,20;UBERON:0000974,4.15e-11,10;UBERON:0003729,1.43e-08,13;UBERON:0000997,7.10e-08,1;UBERON:0005056,7.10e-08,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.584622030967192,0,0,0,0.355009592516614,0.806016785821122,0.67824236924195,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0.768251997860379,0,0.402115889646523,0.185176890317059,0,0,0,0.231860809950154,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,1.20859449591622,0.40101294060657,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,2.18448939149124,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6813166302672,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,2.61724931056649,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,2.15231080825299,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,1.46988596121566,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,3.09248809647972,0,0,0,0,5.57207244901818,4.60252523774266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,8.93677760878255,0,0,0,0,0,0,0,0,0,0,0,0,2.24964734331792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,1.15761237161917,0,1.96997725189636,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,5.28280308396568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15924980702256,1.76954585021611,2.75142897782519,1.96393632455575,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77970243027311,0,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,1.65664801022791,1.78948149994231,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,1.68506870047253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@ENST00000435813,p5@uc001jjs.2 | |short_description=p5@ENST00000435813,p5@uc001jjs.2 | ||
}} | }} |
Latest revision as of 14:10, 23 July 2015
Short description: | p5@ENST00000435813, p5@uc001jjs.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000435813_5end, CAGE_peak_5_at_uc001jjs.2_5end |
Coexpression cluster: | C1315_mucinous_astrocytoma_malignant_glioblastoma_oral_gastric_medulloblastoma |
Association with transcript: | 0bp_to_ENST00000435813, uc001jjs.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.99e-14 | 15 |
glial cell | 3.99e-14 | 15 |
glioblast | 3.99e-14 | 15 |
glioblast (sensu Vertebrata) | 3.99e-14 | 15 |
squamous epithelial cell | 4.42e-13 | 63 |
neuron associated cell | 1.39e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.39e-12 | 17 |
Schwann cell | 7.85e-10 | 2 |
neural cell | 1.09e-08 | 25 |
epithelial cell of alimentary canal | 3.10e-08 | 20 |
epithelial cell | 1.68e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.80e-27 | 4 |
respiratory system mucosa | 1.80e-27 | 4 |
mucosa | 1.06e-11 | 20 |
neck | 4.15e-11 | 10 |
mouth mucosa | 1.43e-08 | 13 |
mammalian vulva | 7.10e-08 | 1 |
external female genitalia | 7.10e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.53e-46 | 14 |
disease of cellular proliferation | 4.59e-17 | 239 |
carcinoma | 7.21e-15 | 106 |
cancer | 1.42e-14 | 235 |
cell type cancer | 3.76e-10 | 143 |
disease of anatomical entity | 6.81e-10 | 39 |
nervous system cancer | 1.43e-09 | 11 |
cystadenocarcinoma | 2.04e-08 | 1 |
mucinous cystadenocarcinoma | 2.04e-08 | 1 |
skin squamous cell carcinoma | 1.21e-07 | 1 |
keratoacanthoma | 1.21e-07 | 1 |