FFCP PHASE1:Hg19::chr10:5652876..5652885,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-120bp_to_ENST00000425246_5end | |||
|cluster_id=chr10:5652876..5652885,- | |||
|description=CAGE_peak_5_at_ENST00000425246_5end | |||
|id=chr10:5652876..5652885,- | |||
|ontology_enrichment_celltype=CL:0002076!9.07e-15!43;CL:0000066!1.98e-14!254;CL:0000223!1.05e-13!59;CL:0002159!4.45e-12!13;CL:0000244!2.18e-11!4;CL:0000731!2.18e-11!4;CL:0002327!2.50e-11!4;CL:0002251!1.78e-09!21;CL:0002166!4.43e-07!3;CL:0002621!4.86e-07!3;CL:0000068!5.31e-07!3;CL:0000069!5.31e-07!3;CL:0000307!5.31e-07!3;CL:0000377!5.31e-07!3;CL:0000240!6.42e-07!6;CL:0000311!6.42e-07!6;CL:0000079!6.42e-07!6;CL:0000237!6.42e-07!6;CL:0000036!6.42e-07!6;CL:0000357!6.42e-07!6;CL:0000114!6.42e-07!6;CL:0002231!6.55e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0000244;1.21e-13;4!CL:0000731;1.21e-13;4!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0000244,1.13e-13,4;CL:0000731,1.13e-13,4;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3 | |||
|ontology_enrichment_disease=DOID:4929!1.27e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.90e-26;2!DOID:299;5.06e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.56e-26,2;DOID:299,5.06e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0000365!2.82e-15!5;UBERON:0003729!2.03e-14!5;UBERON:0004119!3.02e-14!169;UBERON:0000925!3.02e-14!169;UBERON:0006595!3.02e-14!169;UBERON:0000161!2.67e-13!35;UBERON:0005910!9.57e-13!6;UBERON:0000344!1.33e-12!12;UBERON:0001911!2.50e-11!4;UBERON:0005333!2.50e-11!4;UBERON:0008425!2.50e-11!4;UBERON:0005311!2.50e-11!4;UBERON:0003343!9.41e-11!4;UBERON:0004785!9.41e-11!4;UBERON:0003102!9.89e-10!95;UBERON:0001007!1.01e-09!155;UBERON:0001555!1.01e-09!155;UBERON:0007026!1.01e-09!155;UBERON:0000166!1.49e-09!21;UBERON:0000165!6.40e-09!28;UBERON:0000930!6.40e-09!28;UBERON:0001004!8.57e-08!72;UBERON:0000974!2.15e-07!10;UBERON:0001949!4.86e-07!3;UBERON:0001723!7.38e-07!3;UBERON:0001033!7.38e-07!3;UBERON:0010056!7.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.88e-50;1!UBERON:0003703;1.88e-50;1!UBERON:0001174;1.88e-50;1!UBERON:0004914;1.88e-50;1!UBERON:0002114;7.35e-18;2!UBERON:0002394;9.39e-14;4!UBERON:0003928;9.39e-14;4!UBERON:0002108;2.80e-11;4!UBERON:0000365;3.42e-11;5!UBERON:0005910;1.50e-09;6!UBERON:0002294;1.96e-08;7!UBERON:0001173;1.96e-08;7!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7!UBERON:0005178;3.57e-07;34!UBERON:0002224;3.57e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.42e-50,1;UBERON:0003703,2.42e-50,1;UBERON:0001174,2.42e-50,1;UBERON:0004914,2.42e-50,1;UBERON:0002114,8.00e-18,2;UBERON:0002108,2.94e-11,4;UBERON:0000365,3.26e-11,5;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0005910,1.44e-09,6;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7;UBERON:0005178,7.16e-07,34;UBERON:0002224,7.16e-07,34;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.268675568108545,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0.86101074534246,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.162806537221949,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p5@ENST00000425246 | |||
}} |
Latest revision as of 14:13, 23 July 2015
Short description: | p5@ENST00000425246 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000425246_5end |
Coexpression cluster: | NA |
Association with transcript: | -120bp_to_ENST00000425246_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
transitional epithelial cell | 1.13e-13 | 4 |
urothelial cell | 1.13e-13 | 4 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.42e-50 | 1 |
extrahepatic bile duct | 2.42e-50 | 1 |
common bile duct | 2.42e-50 | 1 |
duodenal papilla | 2.42e-50 | 1 |
duodenum | 8.00e-18 | 2 |
small intestine | 2.94e-11 | 4 |
urothelium | 3.26e-11 | 5 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
transitional epithelium | 1.44e-09 | 6 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
thoracic cavity element | 7.16e-07 | 34 |
thoracic cavity | 7.16e-07 | 34 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.56e-26 | 2 |
adenocarcinoma | 5.06e-09 | 25 |