FFCP PHASE1:Hg19::chr10:5660248..5660254,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-124bp_to_ENST00000427341_5end | |||
|cluster_id=chr10:5660248..5660254,- | |||
|coexpression_cluster_id=C724 | |||
|description=CAGE_peak_2_at_ENST00000427341_5end | |||
|id=chr10:5660248..5660254,- | |||
|ontology_enrichment_celltype=CL:0002166!4.31e-25!3;CL:1001319!8.95e-20!1;CL:1000600!8.95e-20!1;CL:0002327!3.26e-19!4 | |||
|ontology_enrichment_celltype_v019=CL:1001319;5.42e-195;1!CL:1000600;5.42e-195;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.42e-195,1;CL:1000600,5.42e-195,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.32e-12!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004645!8.95e-20!1;UBERON:0001256!8.95e-20!1;UBERON:0001259!8.95e-20!1;UBERON:0001911!3.26e-19!4;UBERON:0005333!3.26e-19!4;UBERON:0008425!3.26e-19!4;UBERON:0005311!3.26e-19!4;UBERON:0000997!3.91e-19!1;UBERON:0005056!3.91e-19!1;UBERON:0001708!4.29e-19!4;UBERON:0001704!4.29e-19!4;UBERON:0002370!1.16e-18!4;UBERON:0005058!1.16e-18!4;UBERON:0009113!1.16e-18!4;UBERON:0003295!1.16e-18!4;UBERON:0005562!1.16e-18!4;UBERON:0000974!1.18e-16!10;UBERON:0002090!4.52e-13!6;UBERON:0003351!8.78e-13!6;UBERON:0004177!4.27e-11!7;UBERON:0001255!1.43e-10!2;UBERON:0001556!1.43e-10!2;UBERON:0000076!4.22e-10!8;UBERON:0003408!4.83e-08!10;UBERON:0001042!4.83e-08!10;UBERON:0009145!4.83e-08!10;UBERON:0003129!1.51e-07!11;UBERON:0006562!2.16e-07!11;UBERON:0009722!2.16e-07!11;UBERON:0007690!2.16e-07!11;UBERON:0000344!5.15e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.42e-195;1!UBERON:0001256;5.42e-195;1!UBERON:0001259;5.42e-195;1!UBERON:0001255;1.55e-98;2!UBERON:0001556;1.55e-98;2!UBERON:0000365;1.48e-40;5!UBERON:0005910;4.27e-34;6!UBERON:0003350;5.22e-26;8!UBERON:0000486;6.76e-18;12!UBERON:0002075;1.85e-12;18!UBERON:0000344;2.29e-11;20!UBERON:0000077;8.32e-09;27!UBERON:0000489;2.67e-08;29!UBERON:0006554;4.53e-08;30!UBERON:0001008;4.53e-08;30!UBERON:0005911;2.32e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.42e-195,1;UBERON:0001256,5.42e-195,1;UBERON:0001259,5.42e-195,1;UBERON:0001255,1.55e-98,2;UBERON:0001556,1.55e-98,2;UBERON:0000365,1.48e-40,5;UBERON:0005910,4.27e-34,6;UBERON:0003350,5.22e-26,8;UBERON:0000162,1.43e-15,14;UBERON:0001353,1.43e-15,14;UBERON:0000163,1.43e-15,14;UBERON:0006866,1.43e-15,14;UBERON:0000164,1.43e-15,14;UBERON:0000931,1.43e-15,14;UBERON:0004122,1.22e-14,15;UBERON:0002075,1.85e-12,18;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0003064,1.52e-08,28;UBERON:0000077,2.67e-08,29;UBERON:0000489,7.41e-08,31;UBERON:0000161,5.81e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,2.44209805832924,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@ENST00000427341 | |||
}} |
Latest revision as of 14:14, 23 July 2015
Short description: | p2@ENST00000427341 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000427341_5end |
Coexpression cluster: | C724_transitionalcell_parietal_occipital_duodenum_temporal_non_CD34 |
Association with transcript: | -124bp_to_ENST00000427341_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.42e-195 | 1 |
lower urinary tract cell | 5.42e-195 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.42e-195 | 1 |
wall of urinary bladder | 5.42e-195 | 1 |
mucosa of urinary bladder | 5.42e-195 | 1 |
urinary bladder | 1.55e-98 | 2 |
lower urinary tract | 1.55e-98 | 2 |
urothelium | 1.48e-40 | 5 |
transitional epithelium | 4.27e-34 | 6 |
epithelium of mucosa | 5.22e-26 | 8 |
cloaca | 1.43e-15 | 14 |
anal region | 1.43e-15 | 14 |
embryonic cloaca | 1.43e-15 | 14 |
terminal part of digestive tract | 1.43e-15 | 14 |
primitive urogenital sinus | 1.43e-15 | 14 |
proctodeum | 1.43e-15 | 14 |
genitourinary system | 1.22e-14 | 15 |
viscus | 1.85e-12 | 18 |
hindgut | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
intermediate mesoderm | 1.52e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
cavitated compound organ | 7.41e-08 | 31 |
orifice | 5.81e-07 | 36 |