FFCP PHASE1:Hg19::chr10:6114599..6114604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6114599..6114604,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr10:6114599..6114604,+ | |description=CAGE_peak_at_chr10:6114599..6114604,+ | ||
|id=chr10:6114599..6114604,+ | |id=chr10:6114599..6114604,+ | ||
|ontology_enrichment_celltype=CL:0002087!6.29e-16!119;CL:0000738!1.16e-13!140;CL:0002031!4.55e-13!124;CL:0000988!2.37e-12!182;CL:0000542!8.84e-12!53;CL:0000051!8.84e-12!53;CL:0000037!3.39e-11!172;CL:0000566!3.39e-11!172;CL:0000838!6.45e-11!52;CL:0002032!1.02e-10!165;CL:0000837!1.02e-10!165;CL:0000084!3.86e-07!25;CL:0000827!3.86e-07!25 | |ontology_enrichment_celltype=CL:0002087!6.29e-16!119;CL:0000738!1.16e-13!140;CL:0002031!4.55e-13!124;CL:0000988!2.37e-12!182;CL:0000542!8.84e-12!53;CL:0000051!8.84e-12!53;CL:0000037!3.39e-11!172;CL:0000566!3.39e-11!172;CL:0000838!6.45e-11!52;CL:0002032!1.02e-10!165;CL:0000837!1.02e-10!165;CL:0000084!3.86e-07!25;CL:0000827!3.86e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000785;7.08e-14;1!CL:0000819;7.08e-14;1!CL:0000815;1.40e-07;2!CL:0000792;1.40e-07;2!CL:0002677;1.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,7.55e-14,1;CL:0000815,1.36e-07,2;CL:0000792,1.36e-07,2;CL:0002677,1.36e-07,2;CL:0000785,1.45e-07,2;CL:0000955,1.45e-07,2;CL:0000818,1.45e-07,2;CL:0000954,1.45e-07,2;CL:0000816,1.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000954;1.40e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;7.08e-14;1!DOID:8675;7.08e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.55e-14,1;DOID:8675,7.55e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.63e-12!115;UBERON:0002193!4.05e-09!112;UBERON:0002390!4.05e-09!102;UBERON:0003061!4.05e-09!102;UBERON:0001049!8.84e-09!57;UBERON:0005068!8.84e-09!57;UBERON:0006241!8.84e-09!57;UBERON:0007135!8.84e-09!57 | |ontology_enrichment_uberon=UBERON:0007023!5.63e-12!115;UBERON:0002193!4.05e-09!112;UBERON:0002390!4.05e-09!102;UBERON:0003061!4.05e-09!102;UBERON:0001049!8.84e-09!57;UBERON:0005068!8.84e-09!57;UBERON:0006241!8.84e-09!57;UBERON:0007135!8.84e-09!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0002148;1.99e-07;2!UBERON:0006331;1.99e-07;2!UBERON:0009662;1.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,2.25e-07,2;UBERON:0006331,2.25e-07,2;UBERON:0009662,2.25e-07,2 | |||
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| ||
|short_description=p@chr10:6114599..6114604,+ | |short_description=p@chr10:6114599..6114604,+ | ||
}} | }} |
Latest revision as of 14:24, 23 July 2015
Short description: | p@chr10:6114599..6114604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6114599..6114604, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 7.55e-14 | 1 |
regulatory T cell | 1.36e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.36e-07 | 2 |
naive regulatory T cell | 1.36e-07 | 2 |
mature B cell | 1.45e-07 | 2 |
pre-B-II cell | 1.45e-07 | 2 |
transitional stage B cell | 1.45e-07 | 2 |
small pre-B-II cell | 1.45e-07 | 2 |
immature B cell | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
locus ceruleus | 2.25e-07 | 2 |
brainstem nucleus | 2.25e-07 | 2 |
hindbrain nucleus | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.55e-14 | 1 |
lymphosarcoma | 7.55e-14 | 1 |