FFCP PHASE1:Hg19::chr10:6342353..6342370,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6342353..6342370,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr10:6342353..6342370,+ | |description=CAGE_peak_at_chr10:6342353..6342370,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000738!2.55e-47!140;CL:0002087!1.25e-41!119;CL:0000037!5.24e-36!172;CL:0000566!5.24e-36!172;CL:0002031!1.77e-33!124;CL:0000988!2.76e-33!182;CL:0002057!2.59e-31!42;CL:0002032!1.56e-29!165;CL:0000837!1.56e-29!165;CL:0000860!8.81e-29!45;CL:0000766!1.90e-24!76;CL:0002194!4.32e-22!63;CL:0000576!4.32e-22!63;CL:0000040!4.32e-22!63;CL:0000559!4.32e-22!63;CL:0002009!3.30e-21!65;CL:0000839!3.19e-19!70;CL:0000557!7.36e-19!71;CL:0000624!1.01e-17!6;CL:0000763!2.90e-15!112;CL:0000049!2.90e-15!112;CL:0002393!3.12e-15!9;CL:0002397!3.12e-15!9;CL:0000838!1.51e-14!52;CL:0000542!3.51e-14!53;CL:0000051!3.51e-14!53;CL:0000791!2.11e-11!18;CL:0000789!2.11e-11!18;CL:0002420!2.11e-11!18;CL:0002419!2.11e-11!18;CL:0000790!2.11e-11!18;CL:0000134!2.19e-10!358;CL:0000898!2.24e-10!3;CL:0000784!5.31e-10!3;CL:0002320!6.10e-10!365;CL:0000842!8.98e-10!3;CL:0000084!1.89e-09!25;CL:0000827!1.89e-09!25;CL:0000767!1.90e-09!3;CL:0000623!1.09e-08!3;CL:0000825!1.09e-08!3;CL:0000219!2.20e-08!390;CL:0000815!1.79e-07!2;CL:0000792!1.79e-07!2;CL:0002677!1.79e-07!2;CL:0000224!2.08e-07!4 | |ontology_enrichment_celltype=CL:0000738!2.55e-47!140;CL:0002087!1.25e-41!119;CL:0000037!5.24e-36!172;CL:0000566!5.24e-36!172;CL:0002031!1.77e-33!124;CL:0000988!2.76e-33!182;CL:0002057!2.59e-31!42;CL:0002032!1.56e-29!165;CL:0000837!1.56e-29!165;CL:0000860!8.81e-29!45;CL:0000766!1.90e-24!76;CL:0002194!4.32e-22!63;CL:0000576!4.32e-22!63;CL:0000040!4.32e-22!63;CL:0000559!4.32e-22!63;CL:0002009!3.30e-21!65;CL:0000839!3.19e-19!70;CL:0000557!7.36e-19!71;CL:0000624!1.01e-17!6;CL:0000763!2.90e-15!112;CL:0000049!2.90e-15!112;CL:0002393!3.12e-15!9;CL:0002397!3.12e-15!9;CL:0000838!1.51e-14!52;CL:0000542!3.51e-14!53;CL:0000051!3.51e-14!53;CL:0000791!2.11e-11!18;CL:0000789!2.11e-11!18;CL:0002420!2.11e-11!18;CL:0002419!2.11e-11!18;CL:0000790!2.11e-11!18;CL:0000134!2.19e-10!358;CL:0000898!2.24e-10!3;CL:0000784!5.31e-10!3;CL:0002320!6.10e-10!365;CL:0000842!8.98e-10!3;CL:0000084!1.89e-09!25;CL:0000827!1.89e-09!25;CL:0000767!1.90e-09!3;CL:0000623!1.09e-08!3;CL:0000825!1.09e-08!3;CL:0000219!2.20e-08!390;CL:0000815!1.79e-07!2;CL:0000792!1.79e-07!2;CL:0002677!1.79e-07!2;CL:0000224!2.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000898;2.89e-23;3!CL:0000784;2.10e-22;3!CL:0000226;8.89e-22;3!CL:0000842;8.89e-22;3!CL:0000624;5.86e-20;6!CL:0002393;5.53e-19;6!CL:0002397;5.53e-19;6!CL:0000815;3.83e-16;2!CL:0000792;3.83e-16;2!CL:0002677;3.83e-16;2!CL:0000767;1.87e-10;3!CL:0000895;7.01e-09;1!CL:0000094;9.77e-09;8!CL:0000791;9.75e-07;18!CL:0000789;9.75e-07;18!CL:0002419;9.75e-07;18 | |ontology_enrichment_celltype_v019=CL:0000898;2.89e-23;3!CL:0000784;2.10e-22;3!CL:0000226;8.89e-22;3!CL:0000842;8.89e-22;3!CL:0000624;5.86e-20;6!CL:0002393;5.53e-19;6!CL:0002397;5.53e-19;6!CL:0000815;3.83e-16;2!CL:0000792;3.83e-16;2!CL:0002677;3.83e-16;2!CL:0000767;1.87e-10;3!CL:0000895;7.01e-09;1!CL:0000094;9.77e-09;8!CL:0000791;9.75e-07;18!CL:0000789;9.75e-07;18!CL:0002419;9.75e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000898,2.69e-23,3;CL:0000784,2.26e-22,3;CL:0000226,8.29e-22,3;CL:0000842,8.29e-22,3;CL:0000624,7.47e-20,6;CL:0000738,4.86e-17,136;CL:0000815,3.83e-16,2;CL:0000792,3.83e-16,2;CL:0002677,3.83e-16,2;CL:0000037,4.28e-13,168;CL:0002393,1.16e-12,9;CL:0002397,1.16e-12,9;CL:0000988,3.06e-12,177;CL:0002087,6.91e-11,115;CL:0000767,1.62e-10,3;CL:0000810,6.50e-09,1;CL:0000895,6.50e-09,1;CL:0002436,6.50e-09,1;CL:0002427,6.50e-09,1;CL:0002428,6.50e-09,1;CL:0002429,6.50e-09,1;CL:0002433,6.50e-09,1;CL:0002431,6.50e-09,1;CL:0002432,6.50e-09,1;CL:0000094,9.03e-09,8;CL:0000766,4.63e-08,72;CL:0002032,4.69e-07,161;CL:0000837,4.69e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002427;7.01e-09;1!CL:0000790;9.75e-07;18 | |ontology_enrichment_development_v019=CL:0002427;7.01e-09;1!CL:0000790;9.75e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.53e-16!102;UBERON:0003061!2.53e-16!102;UBERON:0002371!5.31e-16!80;UBERON:0002193!2.56e-15!112;UBERON:0001474!1.97e-14!86;UBERON:0004765!2.41e-11!101;UBERON:0001434!2.41e-11!101;UBERON:0002405!3.49e-11!115;UBERON:0002384!2.46e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!2.53e-16!102;UBERON:0003061!2.53e-16!102;UBERON:0002371!5.31e-16!80;UBERON:0002193!2.56e-15!112;UBERON:0001474!1.97e-14!86;UBERON:0004765!2.41e-11!101;UBERON:0001434!2.41e-11!101;UBERON:0002405!3.49e-11!115;UBERON:0002384!2.46e-09!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.82e-07,98;UBERON:0003061,9.82e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314843125254717,1.96682138424452,0.383829398097213,2.01260960310899,0,0,0,0,0,0,1.66198622559563,0.802177789880567,1.08505435357926,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,2.32380814943136,1.06302149982522,0.838634582033504,1.79725809834392,0.300353785683013,0.64290234678832,0.855038231223746,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.786839080455332,0.393010762749165,1.02800749499755,0,6.8443675993054,3.78758244587787,1.94826728407911,0,12.3734481139432,6.20294904834139,4.33286182024025,0,0.130059347559878,0.164437904603676,0,0.289803085735052,1.77943875794473,0.802622484269139,0,0,6.89796888483458,2.40539211837841,3.03623630423403,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314843125254717,1.96682138424452,0.383829398097213,2.01260960310899,0,0,0,0,0,0,1.66198622559563,0.802177789880567,1.08505435357926,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,2.32380814943136,1.06302149982522,0.838634582033504,1.79725809834392,0.300353785683013,0.64290234678832,0.855038231223746,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,0.587237189370939,0.764546456250458,1.32171328579026,0,0,0.786839080455332,0.393010762749165,1.02800749499755,0,6.8443675993054,3.78758244587787,1.94826728407911,0,12.3734481139432,6.20294904834139,4.33286182024025,0,0.130059347559878,0.164437904603676,0,0.289803085735052,1.77943875794473,0.802622484269139,0,0,6.89796888483458,2.40539211837841,3.03623630423403,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:6342353..6342370,+ | |short_description=p@chr10:6342353..6342370,+ | ||
}} | }} |
Latest revision as of 14:33, 23 July 2015
Short description: | p@chr10:6342353..6342370, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6342353..6342370, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.82e-07 | 98 |
blood island | 9.82e-07 | 98 |