FFCP PHASE1:Hg19::chr10:73823970..73824002,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:73823970..73824002,-
|short_description=p@chr10:73823970..73824002,-
|description=CAGE_peak_at_chr10:73823970..73824002,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:73823970..73824002,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_at_chr10:73823970..73824002,- | |||
|id=chr10:73823970..73824002,- | |||
|ontology_enrichment_celltype=CL:0000791!1.38e-13!18;CL:0000789!1.38e-13!18;CL:0002420!1.38e-13!18;CL:0002419!1.38e-13!18;CL:0000790!1.38e-13!18;CL:0000624!2.78e-10!6;CL:0000084!8.95e-09!25;CL:0000827!8.95e-09!25;CL:0000838!5.31e-07!52;CL:0000542!8.89e-07!53;CL:0000051!8.89e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.27e-12;18!CL:0000789;2.27e-12;18!CL:0002419;2.27e-12;18!CL:0000624;3.75e-10;6!CL:0000623;1.62e-09;3!CL:0000898;2.98e-09;3!CL:0000084;9.52e-09;25!CL:0000895;1.48e-07;1 | |||
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|ontology_enrichment_development_v019=CL:0000790;2.27e-12;18!UBERON:0006215;2.98e-09;3!CL:0002427;1.48e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-34!115;UBERON:0001049!3.83e-26!57;UBERON:0005068!3.83e-26!57;UBERON:0006241!3.83e-26!57;UBERON:0007135!3.83e-26!57;UBERON:0001017!9.43e-22!82;UBERON:0002616!1.28e-21!59;UBERON:0005743!2.81e-21!86;UBERON:0000955!1.62e-19!69;UBERON:0006238!1.62e-19!69;UBERON:0000073!4.09e-18!94;UBERON:0001016!4.09e-18!94;UBERON:0002780!3.80e-17!41;UBERON:0001890!3.80e-17!41;UBERON:0006240!3.80e-17!41;UBERON:0002020!7.63e-17!34;UBERON:0003528!7.63e-17!34;UBERON:0003075!1.20e-16!86;UBERON:0007284!1.20e-16!86;UBERON:0003080!1.43e-16!42;UBERON:0001893!1.57e-16!34;UBERON:0001869!3.13e-16!32;UBERON:0002791!1.29e-15!33;UBERON:0002346!2.02e-15!90;UBERON:0000153!1.18e-12!129;UBERON:0007811!1.18e-12!129;UBERON:0002619!2.71e-12!22;UBERON:0003076!3.32e-11!15;UBERON:0003057!3.32e-11!15;UBERON:0000033!1.33e-10!123;UBERON:0000956!2.10e-10!25;UBERON:0000203!2.10e-10!25;UBERON:0003056!3.62e-10!61;UBERON:0001950!5.86e-10!20;UBERON:0004733!9.45e-10!12;UBERON:0002028!9.45e-10!12;UBERON:0007277!9.45e-10!12;UBERON:0004732!7.66e-09!13;UBERON:0002308!1.69e-08!9;UBERON:0000125!1.69e-08!9;UBERON:0000369!1.39e-07!4;UBERON:0002435!1.39e-07!4;UBERON:0000204!1.39e-07!4;UBERON:0010082!1.39e-07!4;UBERON:0004121!3.16e-07!169;UBERON:0000924!8.02e-07!173;UBERON:0006601!8.02e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;1.48e-07;1!UBERON:0011158;1.48e-07;1!UBERON:0003128;1.48e-07;1!UBERON:0001703;1.48e-07;1!UBERON:0002241;1.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,8.28e-08,1;UBERON:0011158,8.28e-08,1;UBERON:0003128,8.28e-08,1;UBERON:0001703,8.28e-08,1;UBERON:0002241,8.28e-08,1;UBERON:0004761,8.28e-08,1;UBERON:0009617,8.28e-08,1;UBERON:0002370,2.63e-07,4;UBERON:0005058,2.63e-07,4;UBERON:0009113,2.63e-07,4;UBERON:0003295,2.63e-07,4;UBERON:0005562,2.63e-07,4 | |||
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| ||
|short_description=p@chr10:73823970..73824002,- | |||
}} | }} |
Latest revision as of 15:23, 23 July 2015
Short description: | p@chr10:73823970..73824002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73823970..73824002, - |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.33e-12 | 18 |
alpha-beta T cell | 2.33e-12 | 18 |
immature T cell | 2.33e-12 | 18 |
mature T cell | 2.33e-12 | 18 |
immature alpha-beta T cell | 2.33e-12 | 18 |
CD4-positive, alpha-beta T cell | 4.47e-10 | 6 |
natural killer cell | 2.53e-09 | 3 |
pro-NK cell | 2.53e-09 | 3 |
naive T cell | 3.69e-09 | 3 |
T cell | 9.69e-09 | 25 |
pro-T cell | 9.69e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.93e-08 | 52 |
lymphocyte | 2.96e-08 | 53 |
common lymphoid progenitor | 2.96e-08 | 53 |
CD4-positive, alpha-beta thymocyte | 1.91e-07 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.91e-07 | 1 |
mature CD4 single-positive thymocyte | 1.91e-07 | 1 |
resting double-positive thymocyte | 1.91e-07 | 1 |
double-positive blast | 1.91e-07 | 1 |
CD69-positive double-positive thymocyte | 1.91e-07 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.91e-07 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.91e-07 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
olfactory region | 8.28e-08 | 1 |
primary subdivision of skull | 8.28e-08 | 1 |
cranium | 8.28e-08 | 1 |
neurocranium | 8.28e-08 | 1 |
chondrocranium | 8.28e-08 | 1 |
cartilaginous neurocranium | 8.28e-08 | 1 |
head paraxial mesoderm | 8.28e-08 | 1 |
thymus | 2.63e-07 | 4 |
hemolymphoid system gland | 2.63e-07 | 4 |
thymic region | 2.63e-07 | 4 |
pharyngeal gland | 2.63e-07 | 4 |
thymus primordium | 2.63e-07 | 4 |