FFCP PHASE1:Hg19::chr10:8087237..8087255,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:8087237..8087255,+ | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_at_chr10:8087237..8087255,+ | |||
|id=chr10:8087237..8087255,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.09e-07!3;CL:0000066!1.65e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.44e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.93e-12;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.96e-14!143;DOID:5093!1.72e-11!4;DOID:1612!1.72e-11!4;DOID:162!4.22e-11!235;DOID:169!9.96e-11!6;DOID:14566!1.26e-10!239;DOID:299!1.14e-09!25;DOID:3095!1.62e-09!22;DOID:2994!1.62e-09!22;DOID:171!9.94e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.42e-43;4!DOID:1612;7.42e-43;4!DOID:9119;3.85e-12;1!DOID:3095;6.91e-08;22!DOID:2994;6.91e-08;22!DOID:169;8.41e-08;6!DOID:299;5.12e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.20e-42,4;DOID:1612,1.20e-42,4;DOID:9119,3.65e-12,1;DOID:0050687,7.28e-09,143;DOID:3095,6.19e-08,22;DOID:2994,6.19e-08,22;DOID:169,7.08e-08,6;DOID:299,5.59e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.25e-09!14;UBERON:0000158!1.25e-09!14;UBERON:0000013!1.23e-08!5;UBERON:0002410!1.23e-08!5;UBERON:0003124!1.91e-08!7;UBERON:0000476!1.09e-07!3;UBERON:0000920!1.09e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.33e-17;10!UBERON:0001443;8.33e-16;11!UBERON:0000996;1.19e-11;1!UBERON:0001301;1.19e-11;1!UBERON:0000013;3.44e-09;5!UBERON:0002410;3.44e-09;5!UBERON:0002294;6.78e-07;7!UBERON:0001173;6.78e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.82e-17,10;UBERON:0001443,9.90e-16,11;UBERON:0000996,7.76e-12,1;UBERON:0001301,1.63e-11,1;UBERON:0000013,2.80e-09,5;UBERON:0002410,2.80e-09,5;UBERON:0003124,9.10e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0.112611480483322,0,0,1.46561395144326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,3.1608175918371,5.15091697256924,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.385076685522074,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99686361597384,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,1.25815691606258,0,0,0.295930216910801,0,0,0,0,0,1.04171104434093,10.1453599995587,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53620294826866,0.0897576444097721,0.325942115766024,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,2.00397050628834,0,0.599428828746391,0,0,0,0,0.248505071130865,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.709251365692784,2.41291105420991,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,2.11444506695002,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0.737318726261158,0.211312123358627,0.19998739585493,0,0,0.567515953566836,0,0,0,0.511577485214607,1.72519698234691,0,1.74735421107222,0.509197589862076,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0.606965604236632,0,0.266107110487916,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,2.68211655728414,0,0,0,0,0,0,0,0,33.9551982710651,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.808426818959282,0,0,0,1.99727032255654,0,0 | |||
|short_description=p@chr10:8087237..8087255,+ | |||
}} |
Latest revision as of 15:53, 23 July 2015
Short description: | p@chr10:8087237..8087255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087237..8087255, + |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
breast | 2.82e-17 | 10 |
chest | 9.90e-16 | 11 |
vagina | 7.76e-12 | 1 |
epididymis | 1.63e-11 | 1 |
sympathetic nervous system | 2.80e-09 | 5 |
autonomic nervous system | 2.80e-09 | 5 |
chorion | 9.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.20e-42 | 4 |
breast cancer | 1.20e-42 | 4 |
acute myeloid leukemia | 3.65e-12 | 1 |
cell type cancer | 7.28e-09 | 143 |
germ cell and embryonal cancer | 6.19e-08 | 22 |
germ cell cancer | 6.19e-08 | 22 |
neuroendocrine tumor | 7.08e-08 | 6 |
adenocarcinoma | 5.59e-07 | 25 |