FFCP PHASE1:Hg19::chr10:92707051..92707066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:92707051..92707066,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_at_chr10:92707051..92707066,+ | |description=CAGE_peak_at_chr10:92707051..92707066,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000946!3.63e-11!1;CL:0000786!3.63e-11!1;CL:0000980!3.63e-11!1 | |ontology_enrichment_celltype=CL:0000946!3.63e-11!1;CL:0000786!3.63e-11!1;CL:0000980!3.63e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.50e-07;25 | |ontology_enrichment_celltype_v019=CL:0000084;2.50e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.50e-07,25;CL:0000827,2.50e-07,25 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,8.60e-08,51;DOID:0060083,8.60e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.68e-11!4;UBERON:0005058!2.68e-11!4;UBERON:0009113!2.68e-11!4;UBERON:0003295!2.68e-11!4;UBERON:0005562!2.68e-11!4;UBERON:0000974!7.99e-10!10;UBERON:0002118!7.55e-09!5;UBERON:0004532!7.55e-09!5;UBERON:0003351!8.10e-08!6;UBERON:0004177!8.13e-07!7 | |ontology_enrichment_uberon=UBERON:0002370!2.68e-11!4;UBERON:0005058!2.68e-11!4;UBERON:0009113!2.68e-11!4;UBERON:0003295!2.68e-11!4;UBERON:0005562!2.68e-11!4;UBERON:0000974!7.99e-10!10;UBERON:0002118!7.55e-09!5;UBERON:0004532!7.55e-09!5;UBERON:0003351!8.10e-08!6;UBERON:0004177!8.13e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0004177;1.70e-32;5!UBERON:0005057;1.70e-32;5!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0004177;1.70e-32;5!UBERON:0005057;1.70e-32;5!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19 | |||
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|short_description=p@chr10:92707051..92707066,+ | |short_description=p@chr10:92707051..92707066,+ | ||
}} | }} |
Latest revision as of 16:43, 23 July 2015
Short description: | p@chr10:92707051..92707066, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:92707051..92707066, + |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.50e-07 | 25 |
pro-T cell | 2.50e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-40 | 4 |
hemolymphoid system gland | 2.71e-40 | 4 |
thymic region | 2.71e-40 | 4 |
pharyngeal gland | 2.71e-40 | 4 |
thymus primordium | 2.71e-40 | 4 |
pharyngeal epithelium | 2.72e-27 | 6 |
hemopoietic organ | 1.44e-23 | 7 |
immune organ | 1.44e-23 | 7 |
neck | 7.51e-17 | 10 |
gland of gut | 7.51e-17 | 10 |
chordate pharynx | 7.51e-17 | 10 |
pharyngeal region of foregut | 7.51e-17 | 10 |
pharynx | 2.02e-15 | 11 |
entire pharyngeal arch endoderm | 2.02e-15 | 11 |
early pharyngeal endoderm | 2.02e-15 | 11 |
pharyngeal arch system | 7.76e-10 | 18 |
upper respiratory tract | 2.26e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.60e-08 | 51 |
immune system cancer | 8.60e-08 | 51 |