FFCP PHASE1:Hg19::chr10:97983654..97983666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:97983654..97983666,- | |||
|description=CAGE_peak_at_chr10:97983654..97983666,- | |description=CAGE_peak_at_chr10:97983654..97983666,- | ||
|id=chr10:97983654..97983666,- | |id=chr10:97983654..97983666,- | ||
|ontology_enrichment_celltype=CL:0000945!4.97e-27!24;CL:0000826!4.97e-27!24;CL:0002087!2.97e-12!119;CL:0000236!4.33e-12!14;CL:0000542!1.01e-10!53;CL:0000051!1.01e-10!53;CL:0000738!1.20e-10!140;CL:0000838!1.12e-09!52;CL:0002031!1.22e-09!124;CL:0000817!1.17e-07!3;CL:0000037!1.25e-07!172;CL:0000566!1.25e-07!172;CL:0000988!9.78e-07!182 | |ontology_enrichment_celltype=CL:0000945!4.97e-27!24;CL:0000826!4.97e-27!24;CL:0002087!2.97e-12!119;CL:0000236!4.33e-12!14;CL:0000542!1.01e-10!53;CL:0000051!1.01e-10!53;CL:0000738!1.20e-10!140;CL:0000838!1.12e-09!52;CL:0002031!1.22e-09!124;CL:0000817!1.17e-07!3;CL:0000037!1.25e-07!172;CL:0000566!1.25e-07!172;CL:0000988!9.78e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.98e-33;24!CL:0000946;3.16e-18;1!CL:0000786;3.16e-18;1!CL:0000785;8.01e-18;1!CL:0000819;8.01e-18;1!CL:0000542;1.89e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,2.18e-34,2;CL:0000955,2.18e-34,2;CL:0000818,2.18e-34,2;CL:0000954,2.18e-34,2;CL:0000816,2.18e-34,2;CL:0000945,1.67e-33,24;CL:0000826,1.67e-33,24;CL:0000817,2.63e-23,3;CL:0000946,3.16e-18,1;CL:0000786,3.16e-18,1;CL:0000980,3.16e-18,1;CL:0000819,5.26e-18,1;CL:0000838,2.57e-15,52;CL:0000542,5.08e-15,53;CL:0000051,5.08e-15,53;CL:0000236,1.98e-11,14;CL:0002087,1.33e-08,115;CL:0002031,3.20e-08,120;CL:0000738,3.49e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;3.32e-34;2!UBERON:0001045;8.01e-18;1!CL:0000051;1.89e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;8.01e-18;1!DOID:0050177;8.01e-18;1!DOID:0060073;8.01e-18;1!DOID:8675;8.01e-18;1!DOID:0050427;8.01e-18;1!DOID:0060058;1.52e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.26e-18,1;DOID:8675,5.26e-18,1;DOID:630,8.72e-18,1;DOID:0050177,8.72e-18,1;DOID:0050427,8.72e-18,1;DOID:0060058,1.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.14e-13!115;UBERON:0004177!2.80e-07!7;UBERON:0002106!3.18e-07!3;UBERON:0004854!3.18e-07!3;UBERON:0009034!3.18e-07!3;UBERON:0002095!3.18e-07!3;UBERON:0004782!3.18e-07!3;UBERON:0003281!3.18e-07!3;UBERON:0009664!3.18e-07!3;UBERON:0002296!3.18e-07!3;UBERON:0005602!3.18e-07!3;UBERON:0001179!3.18e-07!3;UBERON:0006293!3.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;8.01e-18;1!UBERON:0001153;8.01e-18;1!UBERON:0009854;8.01e-18;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.44e-17,1;UBERON:0001153,1.44e-17,1;UBERON:0001045,1.44e-17,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,0.821005894499457,1.65292640758726,0,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.598390972864896,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.531831842075461,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743212700502875,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,1.64209310294099,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0.408610218334727,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,1.33971858218986,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,2.18944576355981,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.463044948647668,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0.699588091474503,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0.310298987585686,0.213233981900981,0,0.258355639344024,0.0620747142958579,0,0.12729431655633,0,0.435433495793923,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,1.28227396921293 | 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| ||
|short_description=p@chr10:97983654..97983666,- | |short_description=p@chr10:97983654..97983666,- | ||
}} | }} |
Latest revision as of 17:06, 23 July 2015
Short description: | p@chr10:97983654..97983666, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:97983654..97983666, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 2.18e-34 | 2 |
pre-B-II cell | 2.18e-34 | 2 |
transitional stage B cell | 2.18e-34 | 2 |
small pre-B-II cell | 2.18e-34 | 2 |
immature B cell | 2.18e-34 | 2 |
lymphocyte of B lineage | 1.67e-33 | 24 |
pro-B cell | 1.67e-33 | 24 |
precursor B cell | 2.63e-23 | 3 |
antibody secreting cell | 3.16e-18 | 1 |
plasma cell | 3.16e-18 | 1 |
plasmablast | 3.16e-18 | 1 |
B-1 B cell | 5.26e-18 | 1 |
lymphoid lineage restricted progenitor cell | 2.57e-15 | 52 |
lymphocyte | 5.08e-15 | 53 |
common lymphoid progenitor | 5.08e-15 | 53 |
B cell | 1.98e-11 | 14 |
nongranular leukocyte | 1.33e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.20e-08 | 120 |
leukocyte | 3.49e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.44e-17 | 1 |
caecum | 1.44e-17 | 1 |
midgut | 1.44e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.26e-18 | 1 |
lymphosarcoma | 5.26e-18 | 1 |
genetic disease | 8.72e-18 | 1 |
monogenic disease | 8.72e-18 | 1 |
xeroderma pigmentosum | 8.72e-18 | 1 |
lymphoma | 1.37e-07 | 10 |