FFCP PHASE1:Hg19::chr10:9920023..9920059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:9920023..9920059,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr10:9920023..9920059,- | |description=CAGE_peak_at_chr10:9920023..9920059,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.57e-10;2!CL:0000054;2.27e-10;2!CL:0000137;2.27e-10;2!CL:0000092;2.27e-10;2 | |ontology_enrichment_celltype_v019=CL:1000415;1.57e-10;2!CL:0000054;2.27e-10;2!CL:0000137;2.27e-10;2!CL:0000092;2.27e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.57e-10,2;CL:0000054,2.27e-10,2;CL:0000137,2.27e-10,2;CL:0000092,2.27e-10,2;CL:0000062,1.90e-07,11;CL:0000375,1.90e-07,11;CL:0000335,1.90e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.37e-08;10!UBERON:0005564;3.37e-08;10!CL:0000335;1.84e-07;11 | |ontology_enrichment_development_v019=UBERON:0009117;3.37e-08;10!UBERON:0005564;3.37e-08;10!CL:0000335;1.84e-07;11 | ||
|ontology_enrichment_disease=DOID:1036!1.14e-15!8 | |ontology_enrichment_disease=DOID:1036!1.14e-15!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;2.36e-36;8!DOID:0060085;2.25e-19;1!DOID:3165;2.25e-19;1!DOID:0060121;2.25e-19;1!DOID:2438;2.25e-19;1!DOID:4418;2.25e-19;1!DOID:200;2.27e-10;2!DOID:4305;2.27e-10;2!DOID:8692;5.33e-10;31!DOID:2531;3.02e-08;51!DOID:0060083;3.02e-08;51!DOID:1240;3.95e-08;39 | |ontology_enrichment_disease_v019=DOID:1036;2.36e-36;8!DOID:0060085;2.25e-19;1!DOID:3165;2.25e-19;1!DOID:0060121;2.25e-19;1!DOID:2438;2.25e-19;1!DOID:4418;2.25e-19;1!DOID:200;2.27e-10;2!DOID:4305;2.27e-10;2!DOID:8692;5.33e-10;31!DOID:2531;3.02e-08;51!DOID:0060083;3.02e-08;51!DOID:1240;3.95e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,2.15e-36,8;DOID:0060085,2.25e-19,1;DOID:3165,2.25e-19,1;DOID:0060121,2.25e-19,1;DOID:2438,2.25e-19,1;DOID:4418,2.25e-19,1;DOID:200,2.27e-10,2;DOID:4305,2.27e-10,2;DOID:8692,1.07e-09,31;DOID:2531,5.85e-09,51;DOID:0060083,5.85e-09,51;DOID:1240,9.14e-08,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.06e-10;8!UBERON:0003135;1.56e-07;11!UBERON:0002110;1.93e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000473;5.06e-10;8!UBERON:0003135;1.56e-07;11!UBERON:0002110;1.93e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.06e-10,8;UBERON:0003135,1.56e-07,11;UBERON:0002110,1.93e-07,3;UBERON:0006242,1.93e-07,3 | |||
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|short_description=p@chr10:9920023..9920059,- | |short_description=p@chr10:9920023..9920059,- | ||
}} | }} |
Latest revision as of 17:14, 23 July 2015
Short description: | p@chr10:9920023..9920059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:9920023..9920059, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.57e-10 | 2 |
bone matrix secreting cell | 2.27e-10 | 2 |
osteocyte | 2.27e-10 | 2 |
osteoclast | 2.27e-10 | 2 |
osteoblast | 1.90e-07 | 11 |
osteoprogenitor cell | 1.90e-07 | 11 |
mesenchyme condensation cell | 1.90e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
testis | 5.06e-10 | 8 |
male reproductive organ | 1.56e-07 | 11 |
gallbladder | 1.93e-07 | 3 |
gall bladder primordium | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.15e-36 | 8 |
organ system benign neoplasm | 2.25e-19 | 1 |
skin benign neoplasm | 2.25e-19 | 1 |
integumentary system benign neoplasm | 2.25e-19 | 1 |
dermis tumor | 2.25e-19 | 1 |
cutaneous fibrous histiocytoma | 2.25e-19 | 1 |
giant cell tumor | 2.27e-10 | 2 |
bone giant cell tumor | 2.27e-10 | 2 |
myeloid leukemia | 1.07e-09 | 31 |
hematologic cancer | 5.85e-09 | 51 |
immune system cancer | 5.85e-09 | 51 |
leukemia | 9.14e-08 | 39 |