FFCP PHASE1:Hg19::chr11:103571359..103571383,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:103571359..103571383,- to FFCP PHASE1:Hg19::chr11:103571359..103571383,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:103571359..103571383,- | |||
|description=CAGE_peak_at_chr11:103571359..103571383,- | |||
|id=chr11:103571359..103571383,- | |||
|ontology_enrichment_celltype=CL:0000055!8.96e-16!180;CL:0000057!8.29e-15!75;CL:0000136!2.05e-14!15;CL:0002620!9.91e-14!23;CL:0002334!5.22e-12!12;CL:0000048!8.66e-08!430;CL:0000723!2.02e-07!436;CL:0002615!2.52e-07!3;CL:0002579!3.20e-07!3;CL:0002580!3.74e-07!3;CL:0000034!5.94e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.87e-19;12!CL:0002620;1.07e-18;23!CL:0000136;6.48e-18;13!CL:0002615;7.73e-16;3!CL:0002579;1.35e-15;3!CL:0002580;2.31e-15;3!CL:0002617;3.54e-11;2!CL:0000057;3.09e-09;73!CL:0000154;1.68e-07;6!CL:0002623;3.33e-07;3!CL:0000632;6.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.79e-25,15;CL:0000057,9.96e-23,76;CL:0002334,2.80e-19,12;CL:0002620,8.36e-19,23;CL:0002615,7.94e-16,3;CL:0002579,1.43e-15,3;CL:0002580,2.10e-15,3;CL:0002617,3.46e-11,2;CL:0000134,7.19e-10,354;CL:0002320,1.57e-09,361;CL:0000219,2.43e-08,386;CL:0000048,2.81e-08,427;CL:0000723,4.71e-08,433;CL:0000034,9.18e-08,441;CL:0000154,1.57e-07,6;CL:0002623,3.28e-07,3;CL:0000632,6.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!9.06e-07!5;DOID:450!9.06e-07!5;DOID:66!9.06e-07!5;DOID:423!9.06e-07!5;DOID:0080000!9.06e-07!5;DOID:11722!9.06e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;2.68e-09;5!DOID:450;2.68e-09;5!DOID:66;2.68e-09;5!DOID:423;2.68e-09;5!DOID:0080000;2.68e-09;5!DOID:11722;2.68e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.11e-09,5;DOID:450,2.11e-09,5;DOID:66,2.11e-09,5;DOID:423,2.11e-09,5;DOID:0080000,2.11e-09,5;DOID:11722,2.11e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004457!6.78e-15!12;UBERON:0000042!6.78e-15!12;UBERON:0003688!6.85e-13!6;UBERON:0002358!6.85e-13!6;UBERON:0003684!6.85e-13!6;UBERON:0001178!6.85e-13!6;UBERON:0002199!1.01e-11!45;UBERON:0002416!1.01e-11!45;UBERON:0001013!1.67e-11!14;UBERON:0002097!9.82e-10!40;UBERON:0000475!3.71e-08!365;UBERON:0004923!4.43e-07!57;UBERON:0003102!6.25e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.19e-29;6!UBERON:0002358;1.19e-29;6!UBERON:0003684;1.19e-29;6!UBERON:0001178;1.19e-29;6!UBERON:0004457;4.66e-26;9!UBERON:0000042;4.66e-26;9!UBERON:0000310;2.96e-12;10!UBERON:0001013;1.41e-11;14!UBERON:0001443;4.10e-11;11!UBERON:0005406;5.13e-11;2!UBERON:0002097;5.14e-09;41!UBERON:0002199;1.50e-07;46!UBERON:0002416;1.50e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.28e-29,6;UBERON:0002358,1.28e-29,6;UBERON:0003684,1.28e-29,6;UBERON:0001178,1.28e-29,6;UBERON:0004457,2.37e-19,12;UBERON:0000042,2.37e-19,12;UBERON:0000310,2.80e-12,10;UBERON:0002199,2.93e-12,46;UBERON:0002416,2.93e-12,46;UBERON:0002097,8.11e-12,41;UBERON:0001013,2.23e-11,14;UBERON:0001443,3.90e-11,11;UBERON:0005406,5.39e-11,2;UBERON:0002384,7.26e-10,371;UBERON:0003102,2.31e-07,99 | |||
|phase1_expression=13.4442000660212,9.84862409898522,19.451707765244,6.00439790118782,8.93922188854576,13.0850778615055,0,0.631719873426831,1.04474251279935,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,1.50401373190767,0.579386075843295,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.662045904066094,1.43418310374407,0,0,0,0,2.48968828319813,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,6.62027905337559,9.53693555218028,0,1.8549455262919,2.06112432036503,1.30281799432113,0.843881661206331,4.09235421677034,1.7670364197088,5.24684422261106,0.646584227275248,2.13005755509969,1.61203357164224,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14382394926518,2.17048642156577,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,13.8940372378515,2.455391572609,3.92924132206303,17.4269242987753,5.11707249066703,3.69964018630297,4.45254199334973,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,1.81477108515887,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.928067519756987,0,0,2.74716564146234,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,4.7801173586306,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=13.4442000660212,9.84862409898522,19.451707765244,6.00439790118782,8.93922188854576,13.0850778615055,0,0.631719873426831,1.04474251279935,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,1.50401373190767,0.579386075843295,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.662045904066094,1.43418310374407,0,0,0,0,2.48968828319813,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,6.62027905337559,9.53693555218028,0,1.8549455262919,2.06112432036503,1.30281799432113,0.843881661206331,4.09235421677034,1.7670364197088,5.24684422261106,0.646584227275248,2.13005755509969,1.61203357164224,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14382394926518,2.17048642156577,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,0,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.909382714338778,0,0,13.8940372378515,2.455391572609,3.92924132206303,17.4269242987753,5.11707249066703,3.69964018630297,4.45254199334973,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.709522128141196,0.211107635297664,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.71623345421307,0,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,1.81477108515887,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.928067519756987,0,0,2.74716564146234,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,4.7801173586306,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p@chr11:103571359..103571383,- | |||
}} | }} |
Latest revision as of 17:36, 23 July 2015
Short description: | p@chr11:103571359..103571383, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:103571359..103571383, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.79e-25 | 15 |
fibroblast | 9.96e-23 | 76 |
preadipocyte | 2.80e-19 | 12 |
skin fibroblast | 8.36e-19 | 23 |
adipocyte of omentum tissue | 7.94e-16 | 3 |
omentum preadipocyte | 1.43e-15 | 3 |
preadipocyte of the breast | 2.10e-15 | 3 |
adipocyte of breast | 3.46e-11 | 2 |
mesenchymal cell | 7.19e-10 | 354 |
connective tissue cell | 1.57e-09 | 361 |
motile cell | 2.43e-08 | 386 |
multi fate stem cell | 2.81e-08 | 427 |
somatic stem cell | 4.71e-08 | 433 |
stem cell | 9.18e-08 | 441 |
protein secreting cell | 1.57e-07 | 6 |
acinar cell of salivary gland | 3.28e-07 | 3 |
hepatic stellate cell | 6.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.28e-29 | 6 |
peritoneum | 1.28e-29 | 6 |
abdominal cavity | 1.28e-29 | 6 |
visceral peritoneum | 1.28e-29 | 6 |
cavity lining | 2.37e-19 | 12 |
serous membrane | 2.37e-19 | 12 |
breast | 2.80e-12 | 10 |
integument | 2.93e-12 | 46 |
integumental system | 2.93e-12 | 46 |
skin of body | 8.11e-12 | 41 |
adipose tissue | 2.23e-11 | 14 |
chest | 3.90e-11 | 11 |
perirenal fat | 5.39e-11 | 2 |
connective tissue | 7.26e-10 | 371 |
surface structure | 2.31e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.11e-09 | 5 |
myotonic disease | 2.11e-09 | 5 |
muscle tissue disease | 2.11e-09 | 5 |
myopathy | 2.11e-09 | 5 |
muscular disease | 2.11e-09 | 5 |
myotonic dystrophy | 2.11e-09 | 5 |