FFCP PHASE1:Hg19::chr11:10487386..10487391,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:10487386..10487391,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr11:10487386..10487391,+ | |description=CAGE_peak_at_chr11:10487386..10487391,+ | ||
|id=chr11:10487386..10487391,+ | |id=chr11:10487386..10487391,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.84e-29!42;CL:0000860!4.57e-28!45;CL:0002194!8.82e-22!63;CL:0000576!8.82e-22!63;CL:0000040!8.82e-22!63;CL:0000559!8.82e-22!63;CL:0000766!4.11e-21!76;CL:0000839!5.32e-21!70;CL:0002009!9.34e-21!65;CL:0000557!3.16e-19!71;CL:0000763!1.85e-16!112;CL:0000049!1.85e-16!112;CL:0002087!3.64e-14!119;CL:0000738!4.66e-13!140;CL:0002031!6.17e-13!124;CL:0000037!1.85e-12!172;CL:0000566!1.85e-12!172;CL:0000988!3.56e-12!182;CL:0002032!3.75e-12!165;CL:0000837!3.75e-12!165 | |ontology_enrichment_celltype=CL:0002057!3.84e-29!42;CL:0000860!4.57e-28!45;CL:0002194!8.82e-22!63;CL:0000576!8.82e-22!63;CL:0000040!8.82e-22!63;CL:0000559!8.82e-22!63;CL:0000766!4.11e-21!76;CL:0000839!5.32e-21!70;CL:0002009!9.34e-21!65;CL:0000557!3.16e-19!71;CL:0000763!1.85e-16!112;CL:0000049!1.85e-16!112;CL:0002087!3.64e-14!119;CL:0000738!4.66e-13!140;CL:0002031!6.17e-13!124;CL:0000037!1.85e-12!172;CL:0000566!1.85e-12!172;CL:0000988!3.56e-12!182;CL:0002032!3.75e-12!165;CL:0000837!3.75e-12!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.83e-75;33!CL:0002057;9.83e-75;33!CL:0000473;4.43e-52;39!CL:0000234;4.43e-52;39!CL:0000576;6.07e-45;48!CL:0000766;9.27e-34;69!CL:0002087;6.23e-15;104!CL:0002393;7.46e-14;6!CL:0002397;7.46e-14;6!CL:0000763;2.38e-11;100!CL:0000738;3.88e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-87,42;CL:0002057,1.51e-87,42;CL:0000473,3.06e-76,48;CL:0000234,3.06e-76,48;CL:0002194,2.10e-60,59;CL:0000576,2.10e-60,59;CL:0000040,2.10e-60,59;CL:0000559,2.10e-60,59;CL:0002009,2.33e-58,61;CL:0000839,8.81e-54,66;CL:0000557,6.02e-53,67;CL:0000766,4.10e-49,72;CL:0000763,7.05e-32,108;CL:0000049,7.05e-32,108;CL:0002087,9.14e-30,115;CL:0002031,2.09e-28,120;CL:0000738,1.02e-24,136;CL:0002032,2.09e-20,161;CL:0000837,2.09e-20,161;CL:0000037,1.99e-19,168;CL:0000988,2.79e-18,177;CL:0002393,1.87e-09,9;CL:0002397,1.87e-09,9;CL:0000134,1.83e-07,354;CL:0002320,2.99e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-63;42!UBERON:0005425;3.24e-10;1!CL:0000049;4.81e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.45e-19!102;UBERON:0003061!2.45e-19!102;UBERON:0002371!7.52e-17!80;UBERON:0002193!2.43e-16!112;UBERON:0001474!7.19e-15!86;UBERON:0004765!8.64e-12!101;UBERON:0001434!8.64e-12!101;UBERON:0002405!2.42e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!2.45e-19!102;UBERON:0003061!2.45e-19!102;UBERON:0002371!7.52e-17!80;UBERON:0002193!2.43e-16!112;UBERON:0001474!7.19e-15!86;UBERON:0004765!8.64e-12!101;UBERON:0001434!8.64e-12!101;UBERON:0002405!2.42e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.24e-10;1!UBERON:0001785;3.24e-10;1!UBERON:0002464;3.24e-10;1!UBERON:0004904;3.24e-10;1!UBERON:0001021;3.24e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-46,76;UBERON:0001474,7.86e-43,82;UBERON:0004765,8.51e-39,90;UBERON:0002405,1.85e-37,93;UBERON:0002390,2.06e-35,98;UBERON:0003061,2.06e-35,98;UBERON:0001434,1.19e-34,100;UBERON:0002193,7.05e-32,108;UBERON:0002204,1.46e-19,167;UBERON:0003081,1.57e-15,203;UBERON:0000941,3.10e-10,1;UBERON:0001785,3.10e-10,1;UBERON:0002464,3.10e-10,1;UBERON:0004904,3.10e-10,1;UBERON:0001021,3.10e-10,1;UBERON:0003902,3.10e-10,1;UBERON:0005425,3.10e-10,1;UBERON:0000926,8.06e-09,315;UBERON:0004120,8.06e-09,315;UBERON:0006603,8.06e-09,315;UBERON:0002384,5.83e-07,371 | |||
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|short_description=p@chr11:10487386..10487391,+ | |short_description=p@chr11:10487386..10487391,+ | ||
}} | }} |
Latest revision as of 17:40, 23 July 2015
Short description: | p@chr11:10487386..10487391, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:10487386..10487391, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.51e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-87 | 42 |
defensive cell | 3.06e-76 | 48 |
phagocyte | 3.06e-76 | 48 |
monopoietic cell | 2.10e-60 | 59 |
monocyte | 2.10e-60 | 59 |
monoblast | 2.10e-60 | 59 |
promonocyte | 2.10e-60 | 59 |
macrophage dendritic cell progenitor | 2.33e-58 | 61 |
myeloid lineage restricted progenitor cell | 8.81e-54 | 66 |
granulocyte monocyte progenitor cell | 6.02e-53 | 67 |
myeloid leukocyte | 4.10e-49 | 72 |
myeloid cell | 7.05e-32 | 108 |
common myeloid progenitor | 7.05e-32 | 108 |
nongranular leukocyte | 9.14e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 2.09e-28 | 120 |
leukocyte | 1.02e-24 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-20 | 161 |
hematopoietic stem cell | 1.99e-19 | 168 |
hematopoietic cell | 2.79e-18 | 177 |
intermediate monocyte | 1.87e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.87e-09 | 9 |
mesenchymal cell | 1.83e-07 | 354 |
connective tissue cell | 2.99e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.09e-46 | 76 |
bone element | 7.86e-43 | 82 |
skeletal element | 8.51e-39 | 90 |
immune system | 1.85e-37 | 93 |
hematopoietic system | 2.06e-35 | 98 |
blood island | 2.06e-35 | 98 |
skeletal system | 1.19e-34 | 100 |
hemolymphoid system | 7.05e-32 | 108 |
musculoskeletal system | 1.46e-19 | 167 |
lateral plate mesoderm | 1.57e-15 | 203 |
cranial nerve II | 3.10e-10 | 1 |
cranial nerve | 3.10e-10 | 1 |
nerve trunk | 3.10e-10 | 1 |
nerve connecting eye with brain | 3.10e-10 | 1 |
nerve | 3.10e-10 | 1 |
retinal neural layer | 3.10e-10 | 1 |
presumptive neural retina | 3.10e-10 | 1 |
mesoderm | 8.06e-09 | 315 |
mesoderm-derived structure | 8.06e-09 | 315 |
presumptive mesoderm | 8.06e-09 | 315 |
connective tissue | 5.83e-07 | 371 |