Personal tools

FFCP PHASE1:Hg19::chr11:110581726..110581728,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr11:110581726..110581728,-
|description=CAGE_peak_at_chr11:110581726..110581728,-
|description=CAGE_peak_at_chr11:110581726..110581728,-
|id=chr11:110581726..110581728,-
|id=chr11:110581726..110581728,-
|ontology_enrichment_celltype=CL:0002618!7.62e-07!3
|ontology_enrichment_celltype=CL:0002618!7.62e-07!3
|ontology_enrichment_celltype_v019=CL:0000511;1.81e-40;1!CL:0002625;1.81e-40;1!CL:0000216;1.81e-40;1!CL:0002615;1.71e-14;3!CL:0000136;3.43e-13;13!CL:0000333;2.53e-09;5!CL:0000154;6.55e-08;6
|ontology_enrichment_celltype_v019_2=CL:0000511,9.91e-41,1;CL:0002625,9.91e-41,1;CL:0000216,9.91e-41,1;CL:0002615,2.09e-14,3;CL:0000136,1.58e-11,15;CL:0000154,5.92e-08,6
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0003056;1.71e-14;3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:169;5.54e-08;6
|ontology_enrichment_disease_v019_2=DOID:169,5.54e-08,6
|ontology_enrichment_uberon=UBERON:0000955!7.97e-12!69;UBERON:0006238!7.97e-12!69;UBERON:0002616!8.64e-11!59;UBERON:0001869!4.80e-10!32;UBERON:0001049!4.96e-10!57;UBERON:0005068!4.96e-10!57;UBERON:0006241!4.96e-10!57;UBERON:0007135!4.96e-10!57;UBERON:0001017!5.03e-10!82;UBERON:0000073!8.09e-10!94;UBERON:0001016!8.09e-10!94;UBERON:0002780!1.08e-09!41;UBERON:0001890!1.08e-09!41;UBERON:0006240!1.08e-09!41;UBERON:0002619!1.48e-09!22;UBERON:0003080!2.23e-09!42;UBERON:0002020!2.51e-09!34;UBERON:0003528!2.51e-09!34;UBERON:0005743!2.76e-09!86;UBERON:0001893!2.79e-09!34;UBERON:0001950!1.32e-08!20;UBERON:0003075!2.12e-08!86;UBERON:0007284!2.12e-08!86;UBERON:0007023!3.13e-08!115;UBERON:0002791!3.24e-08!33;UBERON:0000956!3.56e-08!25;UBERON:0000203!3.56e-08!25;UBERON:0001872!5.55e-08!5;UBERON:0002346!8.84e-08!90;UBERON:0002066!6.98e-07!5;UBERON:0000033!8.99e-07!123
|ontology_enrichment_uberon_v019=UBERON:0001136;1.81e-40;1!UBERON:0000941;1.81e-40;1!UBERON:0001343;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0004910;1.81e-40;1!UBERON:0004813;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0004909;5.15e-21;2!UBERON:0000010;1.18e-18;8!UBERON:0005904;3.26e-11;4!UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5!UBERON:0003688;6.55e-08;6!UBERON:0002358;6.55e-08;6!UBERON:0003684;6.55e-08;6!UBERON:0001178;6.55e-08;6
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.91e-41,1;UBERON:0001343,9.91e-41,1;UBERON:0004910,9.91e-41,1;UBERON:0005154,9.91e-41,1;UBERON:0005295,9.91e-41,1;UBERON:0004813,9.91e-41,1;UBERON:0005297,9.91e-41,1;UBERON:0005294,9.91e-41,1;UBERON:0010141,9.91e-41,1;UBERON:0005891,9.91e-41,1;UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0004909,3.81e-21,2;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0000010,1.13e-18,8;UBERON:0005904,2.80e-11,4;UBERON:0001781,3.10e-11,4;UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.471612915298998,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0.366078794705889,0,0,0,0.18628920882415,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,2.51625506969434,0,0,0,0,0,0,0,0,0,0.3062454773532,0.449604575675217,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.253663240775627,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0.394636641377094,0,0,0,0,0,0,0,0,0,0.790068058663633,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.471612915298998,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0,0,0,0.366078794705889,0,0,0,0.18628920882415,0.553394539744923,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,2.51625506969434,0,0,0,0,0,0,0,0,0,0.3062454773532,0.449604575675217,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.253663240775627,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0,0.0679697329768317,0.394636641377094,0,0,0,0,0,0,0,0,0,0.790068058663633,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0
|short_description=p@chr11:110581726..110581728,-
|short_description=p@chr11:110581726..110581728,-
}}
}}

Latest revision as of 18:02, 23 July 2015

Short description:p@chr11:110581726..110581728, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr11:110581726..110581728, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data