FFCP PHASE1:Hg19::chr11:111225243..111225260,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:111225243..111225260,- | |||
|coexpression_cluster_id=C442 | |coexpression_cluster_id=C442 | ||
|description=CAGE_peak_at_chr11:111225243..111225260,- | |description=CAGE_peak_at_chr11:111225243..111225260,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!3.75e-57!24;CL:0000826!3.75e-57!24;CL:0000542!7.41e-26!53;CL:0000051!7.41e-26!53;CL:0000838!1.06e-23!52;CL:0000236!3.63e-22!14;CL:0000817!3.89e-13!3;CL:0002087!8.18e-11!119;CL:0000785!1.35e-09!2;CL:0000955!1.35e-09!2;CL:0000818!1.35e-09!2;CL:0000954!1.35e-09!2;CL:0000816!1.35e-09!2;CL:0000738!1.96e-08!140;CL:0002031!3.57e-07!124 | |ontology_enrichment_celltype=CL:0000945!3.75e-57!24;CL:0000826!3.75e-57!24;CL:0000542!7.41e-26!53;CL:0000051!7.41e-26!53;CL:0000838!1.06e-23!52;CL:0000236!3.63e-22!14;CL:0000817!3.89e-13!3;CL:0002087!8.18e-11!119;CL:0000785!1.35e-09!2;CL:0000955!1.35e-09!2;CL:0000818!1.35e-09!2;CL:0000954!1.35e-09!2;CL:0000816!1.35e-09!2;CL:0000738!1.96e-08!140;CL:0002031!3.57e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.03e-96;24!CL:0000542;4.32e-25;53!CL:0000236;2.74e-20;13!CL:0000785;2.63e-12;1!CL:0000819;2.63e-12;1!CL:0000946;3.10e-12;1!CL:0000786;3.10e-12;1!CL:0002087;3.46e-08;104 | |ontology_enrichment_celltype_v019=CL:0000945;7.03e-96;24!CL:0000542;4.32e-25;53!CL:0000236;2.74e-20;13!CL:0000785;2.63e-12;1!CL:0000819;2.63e-12;1!CL:0000946;3.10e-12;1!CL:0000786;3.10e-12;1!CL:0002087;3.46e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.59e-96,24;CL:0000826,6.59e-96,24;CL:0000838,3.04e-43,52;CL:0000542,2.16e-42,53;CL:0000051,2.16e-42,53;CL:0000236,6.51e-27,14;CL:0000785,9.70e-23,2;CL:0000955,9.70e-23,2;CL:0000818,9.70e-23,2;CL:0000954,9.70e-23,2;CL:0000816,9.70e-23,2;CL:0002087,3.08e-18,115;CL:0002031,2.14e-17,120;CL:0000817,1.69e-15,3;CL:0000738,4.16e-15,136;CL:0002032,1.97e-12,161;CL:0000837,1.97e-12,161;CL:0000819,2.63e-12,1;CL:0000946,3.27e-12,1;CL:0000786,3.27e-12,1;CL:0000980,3.27e-12,1;CL:0000037,7.98e-12,168;CL:0000988,4.11e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.32e-25;53!CL:0000954;9.18e-23;2!UBERON:0001045;1.55e-11;1!UBERON:0004872;8.09e-07;7 | |ontology_enrichment_development_v019=CL:0000051;4.32e-25;53!CL:0000954;9.18e-23;2!UBERON:0001045;1.55e-11;1!UBERON:0004872;8.09e-07;7 | ||
|ontology_enrichment_disease=DOID:0060058!2.08e-14!10 | |ontology_enrichment_disease=DOID:0060058!2.08e-14!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.31e-37;10!DOID:0060073;2.63e-12;1!DOID:8675;2.63e-12;1!DOID:630;4.29e-12;1!DOID:0050177;4.29e-12;1!DOID:0050427;4.29e-12;1!DOID:2355;1.55e-11;1 | |ontology_enrichment_disease_v019=DOID:0060058;3.31e-37;10!DOID:0060073;2.63e-12;1!DOID:8675;2.63e-12;1!DOID:630;4.29e-12;1!DOID:0050177;4.29e-12;1!DOID:0050427;4.29e-12;1!DOID:2355;1.55e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.49e-37,10;DOID:0060073,2.63e-12,1;DOID:8675,2.63e-12,1;DOID:630,4.06e-12,1;DOID:0050177,4.06e-12,1;DOID:0050427,4.06e-12,1;DOID:2355,1.47e-11,1;DOID:2531,4.98e-07,51;DOID:0060083,4.98e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.43e-12!3;UBERON:0004854!1.43e-12!3;UBERON:0009034!1.43e-12!3;UBERON:0002095!1.43e-12!3;UBERON:0004782!1.43e-12!3;UBERON:0003281!1.43e-12!3;UBERON:0009664!1.43e-12!3;UBERON:0002296!1.43e-12!3;UBERON:0005602!1.43e-12!3;UBERON:0001179!1.43e-12!3;UBERON:0006293!1.43e-12!3 | |ontology_enrichment_uberon=UBERON:0002106!1.43e-12!3;UBERON:0004854!1.43e-12!3;UBERON:0009034!1.43e-12!3;UBERON:0002095!1.43e-12!3;UBERON:0004782!1.43e-12!3;UBERON:0003281!1.43e-12!3;UBERON:0009664!1.43e-12!3;UBERON:0002296!1.43e-12!3;UBERON:0005602!1.43e-12!3;UBERON:0001179!1.43e-12!3;UBERON:0006293!1.43e-12!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.97e-15;3!UBERON:0001154;1.55e-11;1!UBERON:0001153;1.55e-11;1!UBERON:0009854;1.55e-11;1!UBERON:0004177;3.30e-09;5!UBERON:0005057;3.30e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;9.97e-15;3!UBERON:0001154;1.55e-11;1!UBERON:0001153;1.55e-11;1!UBERON:0009854;1.55e-11;1!UBERON:0004177;3.30e-09;5!UBERON:0005057;3.30e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.23e-14,3;UBERON:0004854,1.23e-14,3;UBERON:0009034,1.23e-14,3;UBERON:0002095,1.23e-14,3;UBERON:0004782,1.23e-14,3;UBERON:0003281,1.23e-14,3;UBERON:0009664,1.23e-14,3;UBERON:0002296,1.23e-14,3;UBERON:0005602,1.23e-14,3;UBERON:0001179,1.23e-14,3;UBERON:0006293,1.23e-14,3;UBERON:0001154,1.32e-11,1;UBERON:0001153,1.32e-11,1;UBERON:0001045,1.32e-11,1;UBERON:0004177,8.84e-07,7;UBERON:0005057,8.84e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,2.05251473624864,3.22714203386085,0,0,0,0,0,0,2.94375362205146,2.70121541726101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27683166757279,0,0,0.800791974072025,0,0,0.954053754535364,3.98449078376614,2.34894875748376,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.929015875628594,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,2.09244169283818,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1297421421556,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74267916555066,2.43585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,1.12780701575824,0.257831551894309,2.19870543034844,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.80822463617505,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,3.52625341533556 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,2.05251473624864,3.22714203386085,0,0,0,0,0,0,2.94375362205146,2.70121541726101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27683166757279,0,0,0.800791974072025,0,0,0.954053754535364,3.98449078376614,2.34894875748376,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.929015875628594,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,2.09244169283818,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1297421421556,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74267916555066,2.43585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26365753956383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,1.12780701575824,0.257831551894309,2.19870543034844,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.80822463617505,0.215166616178029,0,0,0,0,0,0,0,0,0,0.201273793591026,3.52625341533556 | ||
|short_description=p@chr11:111225243..111225260,- | |short_description=p@chr11:111225243..111225260,- | ||
}} | }} |
Latest revision as of 18:04, 23 July 2015
Short description: | p@chr11:111225243..111225260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:111225243..111225260, - |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.59e-96 | 24 |
pro-B cell | 6.59e-96 | 24 |
lymphoid lineage restricted progenitor cell | 3.04e-43 | 52 |
lymphocyte | 2.16e-42 | 53 |
common lymphoid progenitor | 2.16e-42 | 53 |
B cell | 6.51e-27 | 14 |
mature B cell | 9.70e-23 | 2 |
pre-B-II cell | 9.70e-23 | 2 |
transitional stage B cell | 9.70e-23 | 2 |
small pre-B-II cell | 9.70e-23 | 2 |
immature B cell | 9.70e-23 | 2 |
nongranular leukocyte | 3.08e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.14e-17 | 120 |
precursor B cell | 1.69e-15 | 3 |
leukocyte | 4.16e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.97e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-12 | 161 |
B-1 B cell | 2.63e-12 | 1 |
antibody secreting cell | 3.27e-12 | 1 |
plasma cell | 3.27e-12 | 1 |
plasmablast | 3.27e-12 | 1 |
hematopoietic stem cell | 7.98e-12 | 168 |
hematopoietic cell | 4.11e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.23e-14 | 3 |
gastrointestinal system mesentery | 1.23e-14 | 3 |
stomach region | 1.23e-14 | 3 |
mesentery | 1.23e-14 | 3 |
gastrointestinal system serosa | 1.23e-14 | 3 |
mesentery of stomach | 1.23e-14 | 3 |
gut mesentery | 1.23e-14 | 3 |
dorsal mesentery | 1.23e-14 | 3 |
dorsal mesogastrium | 1.23e-14 | 3 |
peritoneal cavity | 1.23e-14 | 3 |
spleen primordium | 1.23e-14 | 3 |
vermiform appendix | 1.32e-11 | 1 |
caecum | 1.32e-11 | 1 |
midgut | 1.32e-11 | 1 |
hemopoietic organ | 8.84e-07 | 7 |
immune organ | 8.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.49e-37 | 10 |
lymphatic system cancer | 2.63e-12 | 1 |
lymphosarcoma | 2.63e-12 | 1 |
genetic disease | 4.06e-12 | 1 |
monogenic disease | 4.06e-12 | 1 |
xeroderma pigmentosum | 4.06e-12 | 1 |
anemia | 1.47e-11 | 1 |
hematologic cancer | 4.98e-07 | 51 |
immune system cancer | 4.98e-07 | 51 |