FFCP PHASE1:Hg19::chr11:11178097..11178113,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:11178097..11178113,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_at_chr11:11178097..11178113,- | |description=CAGE_peak_at_chr11:11178097..11178113,- | ||
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|ontology_enrichment_celltype=CL:0000791!4.34e-34!18;CL:0000789!4.34e-34!18;CL:0002420!4.34e-34!18;CL:0002419!4.34e-34!18;CL:0000790!4.34e-34!18;CL:0000084!1.58e-23!25;CL:0000827!1.58e-23!25;CL:0000624!1.66e-20!6;CL:0000625!1.66e-18!11;CL:0000838!1.46e-12!52;CL:0000542!3.00e-12!53;CL:0000051!3.00e-12!53;CL:0000898!3.98e-11!3;CL:0000815!7.56e-08!2;CL:0000792!7.56e-08!2;CL:0002677!7.56e-08!2 | |ontology_enrichment_celltype=CL:0000791!4.34e-34!18;CL:0000789!4.34e-34!18;CL:0002420!4.34e-34!18;CL:0002419!4.34e-34!18;CL:0000790!4.34e-34!18;CL:0000084!1.58e-23!25;CL:0000827!1.58e-23!25;CL:0000624!1.66e-20!6;CL:0000625!1.66e-18!11;CL:0000838!1.46e-12!52;CL:0000542!3.00e-12!53;CL:0000051!3.00e-12!53;CL:0000898!3.98e-11!3;CL:0000815!7.56e-08!2;CL:0000792!7.56e-08!2;CL:0002677!7.56e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.12e-53;18!CL:0000789;1.12e-53;18!CL:0002419;1.12e-53;18!CL:0000624;3.46e-41;6!CL:0000084;2.64e-38;25!CL:0000625;1.22e-22;11!CL:0000898;2.11e-14;3!CL:0000895;1.24e-11;1!CL:0000542;2.71e-09;53 | |ontology_enrichment_celltype_v019=CL:0000791;1.12e-53;18!CL:0000789;1.12e-53;18!CL:0002419;1.12e-53;18!CL:0000624;3.46e-41;6!CL:0000084;2.64e-38;25!CL:0000625;1.22e-22;11!CL:0000898;2.11e-14;3!CL:0000895;1.24e-11;1!CL:0000542;2.71e-09;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.16e-53,18;CL:0000789,1.16e-53,18;CL:0002420,1.16e-53,18;CL:0002419,1.16e-53,18;CL:0000790,1.16e-53,18;CL:0000624,4.29e-41,6;CL:0000084,2.71e-38,25;CL:0000827,2.71e-38,25;CL:0000625,1.12e-22,11;CL:0000838,1.01e-17,52;CL:0000542,2.32e-17,53;CL:0000051,2.32e-17,53;CL:0000898,2.26e-14,3;CL:0000810,1.31e-11,1;CL:0000895,1.31e-11,1;CL:0002436,1.31e-11,1;CL:0002427,1.31e-11,1;CL:0002428,1.31e-11,1;CL:0002429,1.31e-11,1;CL:0002433,1.31e-11,1;CL:0002431,1.31e-11,1;CL:0002432,1.31e-11,1;CL:0002087,9.84e-09,115;CL:0000738,3.86e-07,136;CL:0002031,8.38e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.12e-53;18!CL:0002427;1.24e-11;1!CL:0000051;2.71e-09;53 | |ontology_enrichment_development_v019=CL:0000790;1.12e-53;18!CL:0002427;1.24e-11;1!CL:0000051;2.71e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.08e-18!20;UBERON:0002619!1.41e-16!22;UBERON:0000178!1.44e-16!15;UBERON:0000179!1.44e-16!15;UBERON:0000463!1.44e-16!15;UBERON:0001869!8.63e-15!32;UBERON:0000956!2.32e-14!25;UBERON:0000203!2.32e-14!25;UBERON:0001893!9.19e-14!34;UBERON:0007023!9.37e-13!115;UBERON:0000200!9.86e-13!6;UBERON:0002791!3.31e-12!33;UBERON:0002020!8.90e-12!34;UBERON:0003528!8.90e-12!34;UBERON:0002780!6.03e-11!41;UBERON:0001890!6.03e-11!41;UBERON:0006240!6.03e-11!41;UBERON:0003080!1.28e-10!42;UBERON:0002771!3.89e-10!3;UBERON:0001871!1.65e-09!7;UBERON:0002370!1.03e-07!4;UBERON:0005058!1.03e-07!4;UBERON:0009113!1.03e-07!4;UBERON:0003295!1.03e-07!4;UBERON:0005562!1.03e-07!4;UBERON:0004177!3.10e-07!7;UBERON:0001049!4.17e-07!57;UBERON:0005068!4.17e-07!57;UBERON:0006241!4.17e-07!57;UBERON:0007135!4.17e-07!57;UBERON:0002616!8.94e-07!59 | |ontology_enrichment_uberon=UBERON:0001950!2.08e-18!20;UBERON:0002619!1.41e-16!22;UBERON:0000178!1.44e-16!15;UBERON:0000179!1.44e-16!15;UBERON:0000463!1.44e-16!15;UBERON:0001869!8.63e-15!32;UBERON:0000956!2.32e-14!25;UBERON:0000203!2.32e-14!25;UBERON:0001893!9.19e-14!34;UBERON:0007023!9.37e-13!115;UBERON:0000200!9.86e-13!6;UBERON:0002791!3.31e-12!33;UBERON:0002020!8.90e-12!34;UBERON:0003528!8.90e-12!34;UBERON:0002780!6.03e-11!41;UBERON:0001890!6.03e-11!41;UBERON:0006240!6.03e-11!41;UBERON:0003080!1.28e-10!42;UBERON:0002771!3.89e-10!3;UBERON:0001871!1.65e-09!7;UBERON:0002370!1.03e-07!4;UBERON:0005058!1.03e-07!4;UBERON:0009113!1.03e-07!4;UBERON:0003295!1.03e-07!4;UBERON:0005562!1.03e-07!4;UBERON:0004177!3.10e-07!7;UBERON:0001049!4.17e-07!57;UBERON:0005068!4.17e-07!57;UBERON:0006241!4.17e-07!57;UBERON:0007135!4.17e-07!57;UBERON:0002616!8.94e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.96e-11;15!UBERON:0000179;8.96e-11;15!UBERON:0000463;8.96e-11;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.96e-11;15!UBERON:0000179;8.96e-11;15!UBERON:0000463;8.96e-11;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.75e-11,15;UBERON:0000179,8.75e-11,15;UBERON:0000463,8.75e-11,15 | |||
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| ||
|short_description=p@chr11:11178097..11178113,- | |short_description=p@chr11:11178097..11178113,- | ||
}} | }} |
Latest revision as of 18:08, 23 July 2015
Short description: | p@chr11:11178097..11178113, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:11178097..11178113, - |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.16e-53 | 18 |
alpha-beta T cell | 1.16e-53 | 18 |
immature T cell | 1.16e-53 | 18 |
mature T cell | 1.16e-53 | 18 |
immature alpha-beta T cell | 1.16e-53 | 18 |
CD4-positive, alpha-beta T cell | 4.29e-41 | 6 |
T cell | 2.71e-38 | 25 |
pro-T cell | 2.71e-38 | 25 |
CD8-positive, alpha-beta T cell | 1.12e-22 | 11 |
lymphoid lineage restricted progenitor cell | 1.01e-17 | 52 |
lymphocyte | 2.32e-17 | 53 |
common lymphoid progenitor | 2.32e-17 | 53 |
naive T cell | 2.26e-14 | 3 |
CD4-positive, alpha-beta thymocyte | 1.31e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.31e-11 | 1 |
mature CD4 single-positive thymocyte | 1.31e-11 | 1 |
resting double-positive thymocyte | 1.31e-11 | 1 |
double-positive blast | 1.31e-11 | 1 |
CD69-positive double-positive thymocyte | 1.31e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.31e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.31e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.31e-11 | 1 |
nongranular leukocyte | 9.84e-09 | 115 |
leukocyte | 3.86e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 8.38e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 8.75e-11 | 15 |
haemolymphatic fluid | 8.75e-11 | 15 |
organism substance | 8.75e-11 | 15 |