FFCP PHASE1:Hg19::chr11:113560699..113560722,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:113560699..113560722,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr11:113560699..113560722,- | |description=CAGE_peak_at_chr11:113560699..113560722,- | ||
|id=chr11:113560699..113560722,- | |id=chr11:113560699..113560722,- | ||
|ontology_enrichment_celltype=CL:0000764!3.21e-10!2;CL:0000765!3.21e-10!2;CL:0000050!3.21e-10!2;CL:0000038!3.21e-10!2;CL:0000558!3.21e-10!2;CL:0000547!3.21e-10!2;CL:0000549!3.21e-10!2;CL:0000550!3.21e-10!2;CL:0000552!3.21e-10!2 | |ontology_enrichment_celltype=CL:0000764!3.21e-10!2;CL:0000765!3.21e-10!2;CL:0000050!3.21e-10!2;CL:0000038!3.21e-10!2;CL:0000558!3.21e-10!2;CL:0000547!3.21e-10!2;CL:0000549!3.21e-10!2;CL:0000550!3.21e-10!2;CL:0000552!3.21e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2!CL:0002615;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.11e-34,2;CL:0000765,1.11e-34,2;CL:0000050,1.11e-34,2;CL:0000038,1.11e-34,2;CL:0000558,1.11e-34,2;CL:0000547,1.11e-34,2;CL:0000549,1.11e-34,2;CL:0000550,1.11e-34,2;CL:0000552,1.11e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.82e-08!8 | |ontology_enrichment_disease=DOID:1036!2.82e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.44e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.64e-18!15;UBERON:0000179!9.64e-18!15;UBERON:0000463!9.64e-18!15 | |ontology_enrichment_uberon=UBERON:0000178!9.64e-18!15;UBERON:0000179!9.64e-18!15;UBERON:0000463!9.64e-18!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.36e-39;15!UBERON:0000179;2.36e-39;15!UBERON:0000463;2.36e-39;15!UBERON:0004913;1.03e-17;1!UBERON:0003703;1.03e-17;1!UBERON:0001174;1.03e-17;1!UBERON:0004914;1.03e-17;1!UBERON:0002390;2.44e-17;32!UBERON:0002193;4.39e-12;42!UBERON:0002114;9.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.93e-39,15;UBERON:0000179,1.93e-39,15;UBERON:0000463,1.93e-39,15;UBERON:0004913,8.72e-18,1;UBERON:0003703,8.72e-18,1;UBERON:0001174,8.72e-18,1;UBERON:0004914,8.72e-18,1;UBERON:0007023,8.62e-09,114;UBERON:0002114,8.62e-07,2 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,6.79705617602397,9.41167623689642,0,0.984043937099117,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,3.0585488285695,1.13929437434833,0.476463550915578,0,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0.359473404589307,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,1.25362188757041,0.617602894321944,0.219284049578707,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,6.79705617602397,9.41167623689642,0,0.984043937099117,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,3.0585488285695,1.13929437434833,0.476463550915578,0,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0.359473404589307,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,1.25362188757041,0.617602894321944,0.219284049578707,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:113560699..113560722,- | |short_description=p@chr11:113560699..113560722,- | ||
}} | }} |
Latest revision as of 18:19, 23 July 2015
Short description: | p@chr11:113560699..113560722, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:113560699..113560722, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.11e-34 | 2 |
erythroblast | 1.11e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.11e-34 | 2 |
erythroid progenitor cell | 1.11e-34 | 2 |
reticulocyte | 1.11e-34 | 2 |
proerythroblast | 1.11e-34 | 2 |
basophilic erythroblast | 1.11e-34 | 2 |
polychromatophilic erythroblast | 1.11e-34 | 2 |
orthochromatic erythroblast | 1.11e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.93e-39 | 15 |
haemolymphatic fluid | 1.93e-39 | 15 |
organism substance | 1.93e-39 | 15 |
hepatopancreatic ampulla | 8.72e-18 | 1 |
extrahepatic bile duct | 8.72e-18 | 1 |
common bile duct | 8.72e-18 | 1 |
duodenal papilla | 8.72e-18 | 1 |
adult organism | 8.62e-09 | 114 |
duodenum | 8.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.44e-09 | 2 |