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FFCP PHASE1:Hg19::chr11:123525613..123525633,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=55800
|EntrezGene=entrezgene:55800
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=20665
|HGNC=HGNC:20665
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=E9PJP6
|UniProt=uniprot:E9PJP6
|association_with_transcript=80bp_to_ENST00000527836_5end
|association_with_transcript=80bp_to_ENST00000527836_5end
|cluster_id=chr11:123525613..123525633,-
|coexpression_cluster_id=C3109
|coexpression_cluster_id=C3109
|description=CAGE_peak_6_at_SCN3B_5end
|description=CAGE_peak_6_at_SCN3B_5end

Revision as of 19:28, 23 July 2015

Short description:p6@SCN3B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_6_at_SCN3B_5end
Coexpression cluster:C3109_skeletal_occipital_temporal_postcentral_paracentral_insula_parietal
Association with transcript: 80bp_to_ENST00000527836_5end
EntrezGene:55800
HGNC: 20665
UniProt: E9PJP6
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data