FFCP PHASE1:Hg19::chr11:123525613..123525633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55800 | |EntrezGene=entrezgene:55800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=20665 | |HGNC=HGNC:20665 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E9PJP6 | |UniProt=uniprot:E9PJP6 | ||
|association_with_transcript=80bp_to_ENST00000527836_5end | |association_with_transcript=80bp_to_ENST00000527836_5end | ||
|cluster_id=chr11:123525613..123525633,- | |||
|coexpression_cluster_id=C3109 | |coexpression_cluster_id=C3109 | ||
|description=CAGE_peak_6_at_SCN3B_5end | |description=CAGE_peak_6_at_SCN3B_5end |
Revision as of 19:28, 23 July 2015
Short description: | p6@SCN3B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCN3B_5end |
Coexpression cluster: | C3109_skeletal_occipital_temporal_postcentral_paracentral_insula_parietal |
Association with transcript: | 80bp_to_ENST00000527836_5end |
EntrezGene: | 55800 |
HGNC: | 20665 |
UniProt: | E9PJP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@SCN3B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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regional part of cerebral cortex | 1.77e-66 | 22 |
neocortex | 1.01e-64 | 20 |
cerebral hemisphere | 1.72e-63 | 32 |
telencephalon | 1.28e-59 | 34 |
cerebral cortex | 2.17e-58 | 25 |
pallium | 2.17e-58 | 25 |
regional part of telencephalon | 6.47e-57 | 32 |
regional part of forebrain | 3.57e-54 | 41 |
forebrain | 3.57e-54 | 41 |
anterior neural tube | 3.57e-54 | 41 |
Showing 1 to 10 of 99 entries