FFCP PHASE1:Hg19::chr11:124615417..124615426,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:124615417..124615426,+ | |||
|coexpression_cluster_id=C494 | |coexpression_cluster_id=C494 | ||
|description=CAGE_peak_at_chr11:124615417..124615426,+ | |description=CAGE_peak_at_chr11:124615417..124615426,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.38e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.38e-08;82 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.62e-10;1 | |ontology_enrichment_disease_v019=DOID:6193;2.62e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,2.50e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001869!9.09e-40!32;UBERON:0001893!4.51e-37!34;UBERON:0001950!9.97e-37!20;UBERON:0002791!6.12e-35!33;UBERON:0002020!9.68e-34!34;UBERON:0003528!9.68e-34!34;UBERON:0002619!4.61e-33!22;UBERON:0002780!1.86e-32!41;UBERON:0001890!1.86e-32!41;UBERON:0006240!1.86e-32!41;UBERON:0003080!1.59e-31!42;UBERON:0000956!1.26e-28!25;UBERON:0000203!1.26e-28!25;UBERON:0007023!2.35e-28!115;UBERON:0001049!2.13e-25!57;UBERON:0005068!2.13e-25!57;UBERON:0006241!2.13e-25!57;UBERON:0007135!2.13e-25!57;UBERON:0002616!2.76e-24!59;UBERON:0000955!5.49e-23!69;UBERON:0006238!5.49e-23!69;UBERON:0001017!8.70e-23!82;UBERON:0005743!2.49e-21!86;UBERON:0003056!3.11e-21!61;UBERON:0002346!5.46e-20!90;UBERON:0003075!8.03e-20!86;UBERON:0007284!8.03e-20!86;UBERON:0000073!1.67e-18!94;UBERON:0001016!1.67e-18!94;UBERON:0000200!4.13e-16!6;UBERON:0001872!2.99e-13!5;UBERON:0002420!4.44e-13!9;UBERON:0007245!4.44e-13!9;UBERON:0010009!4.44e-13!9;UBERON:0010011!4.44e-13!9;UBERON:0000454!4.44e-13!9;UBERON:0000033!2.61e-12!123;UBERON:0001871!1.56e-11!7;UBERON:0000153!2.32e-11!129;UBERON:0007811!2.32e-11!129;UBERON:0000369!6.45e-11!4;UBERON:0002435!6.45e-11!4;UBERON:0000204!6.45e-11!4;UBERON:0010082!6.45e-11!4;UBERON:0000924!4.87e-09!173;UBERON:0006601!4.87e-09!173;UBERON:0009663!5.44e-09!7;UBERON:0002771!7.89e-09!3;UBERON:0004121!9.78e-09!169;UBERON:0002021!1.01e-08!5;UBERON:0005383!1.25e-08!3;UBERON:0005382!1.25e-08!3;UBERON:0000178!4.64e-08!15;UBERON:0000179!4.64e-08!15;UBERON:0000463!4.64e-08!15;UBERON:0002308!6.84e-07!9;UBERON:0000125!6.84e-07!9 | |ontology_enrichment_uberon=UBERON:0001869!9.09e-40!32;UBERON:0001893!4.51e-37!34;UBERON:0001950!9.97e-37!20;UBERON:0002791!6.12e-35!33;UBERON:0002020!9.68e-34!34;UBERON:0003528!9.68e-34!34;UBERON:0002619!4.61e-33!22;UBERON:0002780!1.86e-32!41;UBERON:0001890!1.86e-32!41;UBERON:0006240!1.86e-32!41;UBERON:0003080!1.59e-31!42;UBERON:0000956!1.26e-28!25;UBERON:0000203!1.26e-28!25;UBERON:0007023!2.35e-28!115;UBERON:0001049!2.13e-25!57;UBERON:0005068!2.13e-25!57;UBERON:0006241!2.13e-25!57;UBERON:0007135!2.13e-25!57;UBERON:0002616!2.76e-24!59;UBERON:0000955!5.49e-23!69;UBERON:0006238!5.49e-23!69;UBERON:0001017!8.70e-23!82;UBERON:0005743!2.49e-21!86;UBERON:0003056!3.11e-21!61;UBERON:0002346!5.46e-20!90;UBERON:0003075!8.03e-20!86;UBERON:0007284!8.03e-20!86;UBERON:0000073!1.67e-18!94;UBERON:0001016!1.67e-18!94;UBERON:0000200!4.13e-16!6;UBERON:0001872!2.99e-13!5;UBERON:0002420!4.44e-13!9;UBERON:0007245!4.44e-13!9;UBERON:0010009!4.44e-13!9;UBERON:0010011!4.44e-13!9;UBERON:0000454!4.44e-13!9;UBERON:0000033!2.61e-12!123;UBERON:0001871!1.56e-11!7;UBERON:0000153!2.32e-11!129;UBERON:0007811!2.32e-11!129;UBERON:0000369!6.45e-11!4;UBERON:0002435!6.45e-11!4;UBERON:0000204!6.45e-11!4;UBERON:0010082!6.45e-11!4;UBERON:0000924!4.87e-09!173;UBERON:0006601!4.87e-09!173;UBERON:0009663!5.44e-09!7;UBERON:0002771!7.89e-09!3;UBERON:0004121!9.78e-09!169;UBERON:0002021!1.01e-08!5;UBERON:0005383!1.25e-08!3;UBERON:0005382!1.25e-08!3;UBERON:0000178!4.64e-08!15;UBERON:0000179!4.64e-08!15;UBERON:0000463!4.64e-08!15;UBERON:0002308!6.84e-07!9;UBERON:0000125!6.84e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.70e-41;20!UBERON:0000200;7.69e-38;6!UBERON:0002619;9.04e-38;22!UBERON:0001869;1.28e-35;32!UBERON:0001893;5.38e-35;34!UBERON:0000956;2.96e-33;25!UBERON:0000203;2.96e-33;25!UBERON:0002791;1.41e-29;32!UBERON:0003528;4.09e-26;34!UBERON:0002020;4.09e-26;34!UBERON:0000178;2.18e-21;15!UBERON:0000179;2.18e-21;15!UBERON:0000463;2.18e-21;15!UBERON:0002780;2.11e-19;41!UBERON:0001890;2.11e-19;41!UBERON:0002702;2.16e-19;2!UBERON:0002021;6.59e-17;5!UBERON:0001872;1.04e-16;5!UBERON:0001870;2.97e-13;3!UBERON:0000955;2.50e-12;68!UBERON:0001017;2.51e-12;75!UBERON:0002581;2.62e-10;1!UBERON:0002902;2.62e-10;1!UBERON:0009899;2.62e-10;1!UBERON:0007190;2.62e-10;1!UBERON:0007023;9.10e-10;114!UBERON:0002390;1.37e-09;32!UBERON:0000073;1.38e-09;53!UBERON:0002616;1.38e-09;53!UBERON:0001016;8.70e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0001950;1.70e-41;20!UBERON:0000200;7.69e-38;6!UBERON:0002619;9.04e-38;22!UBERON:0001869;1.28e-35;32!UBERON:0001893;5.38e-35;34!UBERON:0000956;2.96e-33;25!UBERON:0000203;2.96e-33;25!UBERON:0002791;1.41e-29;32!UBERON:0003528;4.09e-26;34!UBERON:0002020;4.09e-26;34!UBERON:0000178;2.18e-21;15!UBERON:0000179;2.18e-21;15!UBERON:0000463;2.18e-21;15!UBERON:0002780;2.11e-19;41!UBERON:0001890;2.11e-19;41!UBERON:0002702;2.16e-19;2!UBERON:0002021;6.59e-17;5!UBERON:0001872;1.04e-16;5!UBERON:0001870;2.97e-13;3!UBERON:0000955;2.50e-12;68!UBERON:0001017;2.51e-12;75!UBERON:0002581;2.62e-10;1!UBERON:0002902;2.62e-10;1!UBERON:0009899;2.62e-10;1!UBERON:0007190;2.62e-10;1!UBERON:0007023;9.10e-10;114!UBERON:0002390;1.37e-09;32!UBERON:0000073;1.38e-09;53!UBERON:0002616;1.38e-09;53!UBERON:0001016;8.70e-07;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.83e-41,20;UBERON:0002619,9.64e-38,22;UBERON:0000200,1.48e-37,6;UBERON:0001869,1.77e-37,32;UBERON:0001893,3.11e-35,34;UBERON:0000956,3.13e-33,25;UBERON:0000203,3.13e-33,25;UBERON:0002791,1.66e-31,32;UBERON:0003528,1.30e-29,34;UBERON:0002020,1.30e-29,34;UBERON:0002780,4.67e-29,41;UBERON:0001890,4.67e-29,41;UBERON:0003080,4.67e-29,41;UBERON:0006240,4.67e-29,41;UBERON:0007023,6.57e-29,114;UBERON:0000955,5.20e-23,68;UBERON:0006238,5.20e-23,68;UBERON:0000073,3.47e-22,53;UBERON:0002616,3.47e-22,53;UBERON:0001017,4.48e-22,81;UBERON:0000178,1.47e-21,15;UBERON:0000179,1.47e-21,15;UBERON:0000463,1.47e-21,15;UBERON:0001049,6.42e-21,56;UBERON:0005068,6.42e-21,56;UBERON:0006241,6.42e-21,56;UBERON:0007135,6.42e-21,56;UBERON:0001016,1.12e-19,89;UBERON:0002702,2.17e-19,2;UBERON:0003056,4.44e-19,61;UBERON:0002021,5.02e-17,5;UBERON:0001872,1.75e-16,5;UBERON:0003075,9.11e-14,82;UBERON:0007284,9.11e-14,82;UBERON:0001870,2.97e-13,3;UBERON:0002346,4.80e-13,86;UBERON:0010371,1.78e-10,104;UBERON:0002902,3.01e-10,1;UBERON:0009899,3.01e-10,1;UBERON:0007190,3.61e-10,1;UBERON:0002581,3.96e-10,1;UBERON:0004121,3.19e-09,171;UBERON:0000924,3.19e-09,171;UBERON:0006601,3.19e-09,171;UBERON:0010314,7.36e-08,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0.764637207142375,1.70894156152249,0,1.23408681925858,1.94541993357815,1.62009431171434,11.1037524681198,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,3.87733098438087,1.11321717794222,0,0,0,0,0,0,0,0.344743373241465,0,0,4.42870692906919,0.60298219312704,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.91124334987037,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.78281421196086,1.502291168478,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.834979926253974,2.8339315265117,0.159633859057151,1.8460472781668,0,1.45230230174858,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,0.620060389503552,1.01465296310251,0.546974809018219,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.543757863814654,1.11813715056843,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.63179576458195,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,0.764637207142375,1.70894156152249,0,1.23408681925858,1.94541993357815,1.62009431171434,11.1037524681198,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,3.87733098438087,1.11321717794222,0,0,0,0,0,0,0,0.344743373241465,0,0,4.42870692906919,0.60298219312704,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.91124334987037,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,3.78281421196086,1.502291168478,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.834979926253974,2.8339315265117,0.159633859057151,1.8460472781668,0,1.45230230174858,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,0.620060389503552,1.01465296310251,0.546974809018219,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.543757863814654,1.11813715056843,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,1.63179576458195,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:124615417..124615426,+ | |short_description=p@chr11:124615417..124615426,+ | ||
}} | }} |
Latest revision as of 19:32, 23 July 2015
Short description: | p@chr11:124615417..124615426, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:124615417..124615426, + |
Coexpression cluster: | C494_occipital_medial_brain_Whole_caudate_parietal_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.50e-10 | 1 |