FFCP PHASE1:Hg19::chr11:19371449..19371460,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:19371449..19371460,+ | |||
|coexpression_cluster_id=C1139 | |||
|description=CAGE_peak_at_chr11:19371449..19371460,+ | |description=CAGE_peak_at_chr11:19371449..19371460,+ | ||
|id=chr11:19371449..19371460,+ | |id=chr11:19371449..19371460,+ | ||
|ontology_enrichment_celltype=CL:0000188!4.14e-14!9;CL:0002580!2.37e-12!3;CL:0000515!1.95e-09!4;CL:0002617!4.97e-09!2;CL:0000128!1.08e-08!7;CL:0000126!1.08e-08!7;CL:0000127!1.08e-08!7;CL:0002453!1.08e-08!7;CL:0000680!7.23e-07!57;CL:0000056!7.23e-07!57;CL:0000355!7.23e-07!57 | |ontology_enrichment_celltype=CL:0000188!4.14e-14!9;CL:0002580!2.37e-12!3;CL:0000515!1.95e-09!4;CL:0002617!4.97e-09!2;CL:0000128!1.08e-08!7;CL:0000126!1.08e-08!7;CL:0000127!1.08e-08!7;CL:0002453!1.08e-08!7;CL:0000680!7.23e-07!57;CL:0000056!7.23e-07!57;CL:0000355!7.23e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000515;2.19e-53;3!CL:0000056;2.22e-40;4!CL:0000680;1.28e-23;7!CL:0002617;5.69e-21;2!CL:0002321;1.27e-11;15!CL:0000128;5.38e-07;7!CL:0000126;5.38e-07;7!CL:0000127;5.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.81e-40,4;CL:0002617,6.96e-21,2;CL:0000128,5.38e-07,7;CL:0000126,5.38e-07,7;CL:0000127,5.38e-07,7;CL:0002453,5.38e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000515;2.22e-40;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.42e-11,4;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0002616!7.63e-19!59;UBERON:0005743!1.45e-17!86;UBERON:0001049!1.73e-17!57;UBERON:0005068!1.73e-17!57;UBERON:0006241!1.73e-17!57;UBERON:0007135!1.73e-17!57;UBERON:0000955!4.43e-17!69;UBERON:0006238!4.43e-17!69;UBERON:0001017!7.74e-17!82;UBERON:0003075!6.88e-16!86;UBERON:0007284!6.88e-16!86;UBERON:0000073!2.18e-15!94;UBERON:0001016!2.18e-15!94;UBERON:0002346!6.05e-15!90;UBERON:0000475!7.91e-12!365;UBERON:0003076!1.37e-11!15;UBERON:0003057!1.37e-11!15;UBERON:0001893!1.46e-11!34;UBERON:0000483!5.58e-11!309;UBERON:0000153!6.25e-11!129;UBERON:0007811!6.25e-11!129;UBERON:0004733!6.57e-11!12;UBERON:0002028!6.57e-11!12;UBERON:0007277!6.57e-11!12;UBERON:0000119!8.76e-11!312;UBERON:0000033!1.35e-10!123;UBERON:0001869!2.33e-10!32;UBERON:0002791!4.95e-10!33;UBERON:0004732!5.15e-10!13;UBERON:0002020!8.21e-10!34;UBERON:0003528!8.21e-10!34;UBERON:0000310!1.21e-09!10;UBERON:0000200!2.55e-09!6;UBERON:0002780!3.14e-09!41;UBERON:0001890!3.14e-09!41;UBERON:0006240!3.14e-09!41;UBERON:0003080!5.84e-09!42;UBERON:0001443!9.93e-09!11;UBERON:0007023!1.39e-08!115;UBERON:0002298!6.70e-08!8;UBERON:0004121!8.73e-08!169;UBERON:0000924!1.77e-07!173;UBERON:0006601!1.77e-07!173;UBERON:0004290!2.95e-07!70;UBERON:0002680!5.96e-07!9;UBERON:0001895!5.96e-07!9;UBERON:0010092!5.96e-07!9;UBERON:0000481!8.49e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.84e-11;16!UBERON:0002036;5.84e-11;16 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr11:19371449..19371460,+ | |short_description=p@chr11:19371449..19371460,+ | ||
}} | }} |
Latest revision as of 20:48, 23 July 2015
Short description: | p@chr11:19371449..19371460, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:19371449..19371460, + |
Coexpression cluster: | C1139_Myoblast_mesenchymal_tongue_Preadipocyte_Astrocyte_nasal_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.81e-40 | 4 |
adipocyte of breast | 6.96e-21 | 2 |
oligodendrocyte | 5.38e-07 | 7 |
macroglial cell | 5.38e-07 | 7 |
astrocyte | 5.38e-07 | 7 |
oligodendrocyte precursor cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.42e-11 | 4 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |