FFCP PHASE1:Hg19::chr11:1949070..1949079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1949070..1949079,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr11:1949070..1949079,+ | |description=CAGE_peak_at_chr11:1949070..1949079,+ | ||
|id=chr11:1949070..1949079,+ | |id=chr11:1949070..1949079,+ | ||
|ontology_enrichment_celltype=CL:0002537!5.26e-12!5;CL:0000349!4.08e-09!3;CL:0002577!4.08e-09!3;CL:0002541!8.03e-09!3;CL:0002581!1.36e-07!1;CL:1001319!3.85e-07!1;CL:1000600!3.85e-07!1 | |ontology_enrichment_celltype=CL:0002537!5.26e-12!5;CL:0000349!4.08e-09!3;CL:0002577!4.08e-09!3;CL:0002541!8.03e-09!3;CL:0002581!1.36e-07!1;CL:1001319!3.85e-07!1;CL:1000600!3.85e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002537;8.15e-60;5!CL:0002581;5.97e-34;1!CL:0000349;2.67e-28;19!CL:0002577;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,7.37e-60,5;CL:0002581,9.85e-34,1;CL:0000349,2.32e-28,19;CL:0002577,2.31e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.48e-27!14;UBERON:0000158!7.48e-27!14;UBERON:0000478!3.64e-15!24;UBERON:0004923!3.80e-15!57;UBERON:0000305!1.45e-14!7;UBERON:0003124!6.02e-14!7;UBERON:0004871!9.25e-13!8;UBERON:0001255!1.08e-12!2;UBERON:0001556!1.08e-12!2;UBERON:0000476!8.03e-09!3;UBERON:0000920!8.03e-09!3;UBERON:0007029!1.44e-07!1;UBERON:0001301!2.52e-07!1;UBERON:0004645!3.85e-07!1;UBERON:0001256!3.85e-07!1;UBERON:0001259!3.85e-07!1;UBERON:0001987!4.90e-07!4;UBERON:0004340!4.90e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!7.48e-27!14;UBERON:0000158!7.48e-27!14;UBERON:0000478!3.64e-15!24;UBERON:0004923!3.80e-15!57;UBERON:0000305!1.45e-14!7;UBERON:0003124!6.02e-14!7;UBERON:0004871!9.25e-13!8;UBERON:0001255!1.08e-12!2;UBERON:0001556!1.08e-12!2;UBERON:0000476!8.03e-09!3;UBERON:0000920!8.03e-09!3;UBERON:0007029!1.44e-07!1;UBERON:0001301!2.52e-07!1;UBERON:0004645!3.85e-07!1;UBERON:0001256!3.85e-07!1;UBERON:0001259!3.85e-07!1;UBERON:0001987!4.90e-07!4;UBERON:0004340!4.90e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.86e-43;7!UBERON:0005631;1.96e-30;10!UBERON:0000158;1.96e-30;10!UBERON:0000478;1.46e-22;24!UBERON:0003127;9.86e-18;2!UBERON:0005406;9.86e-18;2!UBERON:0001987;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,4.53e-43,7;UBERON:0005631,3.38e-38,14;UBERON:0000158,3.38e-38,14;UBERON:0004871,8.09e-38,8;UBERON:0000478,1.30e-22,24;UBERON:0003127,1.07e-17,2;UBERON:0005406,1.27e-17,2;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4;UBERON:0004923,1.32e-08,66 | |||
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|short_description=p@chr11:1949070..1949079,+ | |short_description=p@chr11:1949070..1949079,+ | ||
}} | }} |
Latest revision as of 20:49, 23 July 2015
Short description: | p@chr11:1949070..1949079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1949070..1949079, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 7.37e-60 | 5 |
perirenal preadipocyte | 9.85e-34 | 1 |
extraembryonic cell | 2.32e-28 | 19 |
placental epithelial cell | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 4.53e-43 | 7 |
extraembryonic membrane | 3.38e-38 | 14 |
membranous layer | 3.38e-38 | 14 |
somatic layer of lateral plate mesoderm | 8.09e-38 | 8 |
extraembryonic structure | 1.30e-22 | 24 |
open tracheal system trachea | 1.07e-17 | 2 |
perirenal fat | 1.27e-17 | 2 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
organ component layer | 1.32e-08 | 66 |