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FFCP PHASE1:Hg19::chr11:1950008..1950019,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr11:1950008..1950019,+
|coexpression_cluster_id=C68
|description=CAGE_peak_at_chr11:1950008..1950019,+
|description=CAGE_peak_at_chr11:1950008..1950019,+
|id=chr11:1950008..1950019,+
|id=chr11:1950008..1950019,+
|ontology_enrichment_celltype=CL:0000349!1.54e-18!3;CL:0002577!1.54e-18!3;CL:0002541!4.35e-18!3;CL:0002580!2.53e-17!3;CL:0002334!1.60e-11!12;CL:0002537!2.36e-11!5;CL:0002581!3.17e-07!1;CL:0002616!3.57e-07!1
|ontology_enrichment_celltype=CL:0000349!1.54e-18!3;CL:0002577!1.54e-18!3;CL:0002541!4.35e-18!3;CL:0002580!2.53e-17!3;CL:0002334!1.60e-11!12;CL:0002537!2.36e-11!5;CL:0002581!3.17e-07!1;CL:0002616!3.57e-07!1
|ontology_enrichment_celltype_v019=CL:0002577;4.01e-74;3!CL:0000349;1.88e-63;19!CL:0002541;1.08e-33;3!CL:0002581;1.11e-25;1!CL:0002537;4.92e-21;5
|ontology_enrichment_celltype_v019_2=CL:0002577,3.54e-74,3;CL:0000349,1.79e-63,19;CL:0002541,1.08e-33,3;CL:0002581,1.26e-25,1;CL:0002537,4.92e-21,5
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005631!1.11e-32!14;UBERON:0000158!1.11e-32!14;UBERON:0003124!8.77e-30!7;UBERON:0000478!2.05e-18!24;UBERON:0000476!4.35e-18!3;UBERON:0000920!4.35e-18!3;UBERON:0001987!4.91e-14!4;UBERON:0004340!4.91e-14!4;UBERON:0005406!9.95e-13!2;UBERON:0004923!3.39e-10!57;UBERON:0001013!5.22e-10!14;UBERON:0000310!3.52e-09!10;UBERON:0001443!2.36e-08!11;UBERON:0000305!3.13e-08!7;UBERON:0004871!2.99e-07!8;UBERON:0006122!4.01e-07!1;UBERON:0007029!5.37e-07!1;UBERON:0001000!6.02e-07!1;UBERON:0005352!6.02e-07!1
|ontology_enrichment_uberon_v019=UBERON:0001987;7.34e-56;4!UBERON:0000478;2.59e-50;24!UBERON:0005631;5.25e-40;10!UBERON:0000158;5.25e-40;10!UBERON:0003124;1.08e-33;3!UBERON:0000920;1.08e-33;3!UBERON:0000305;2.47e-15;7!UBERON:0005406;1.46e-13;2!UBERON:0000077;6.14e-09;27
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.50e-87,7;UBERON:0005631,5.51e-86,14;UBERON:0000158,5.51e-86,14;UBERON:0001987,6.68e-56,4;UBERON:0004340,6.68e-56,4;UBERON:0000478,2.50e-50,24;UBERON:0000920,1.08e-33,3;UBERON:0004923,1.94e-18,66;UBERON:0000305,2.47e-15,7;UBERON:0004871,1.51e-13,8;UBERON:0005406,1.55e-13,2;UBERON:0000995,2.61e-11,21;UBERON:0005795,7.93e-11,22;UBERON:0003975,7.93e-11,22;UBERON:0004175,1.31e-09,25;UBERON:0000077,2.27e-08,29
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|short_description=p@chr11:1950008..1950019,+
|short_description=p@chr11:1950008..1950019,+
}}
}}

Latest revision as of 20:49, 23 July 2015

Short description:p@chr11:1950008..1950019, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr11:1950008..1950019, +
Coexpression cluster:C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



0.0
2.5
5.0
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12.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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