FFCP PHASE1:Hg19::chr11:2160293..2160310,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=278bp_to_BC017277_5end | |association_with_transcript=278bp_to_BC017277_5end | ||
|cluster_id=chr11:2160293..2160310,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_3_at_BC017277_5end | |description=CAGE_peak_3_at_BC017277_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.85e-16;19!CL:0000244;1.90e-08;4!CL:0000731;1.90e-08;4!CL:0002577;5.53e-08;3!CL:0002541;5.72e-08;3 | |ontology_enrichment_celltype_v019=CL:0000349;4.85e-16;19!CL:0000244;1.90e-08;4!CL:0000731;1.90e-08;4!CL:0002577;5.53e-08;3!CL:0002541;5.72e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.94e-16,19;CL:0000244,1.67e-08,4;CL:0000731,1.67e-08,4;CL:0002541,5.67e-08,3;CL:0002577,5.67e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.14e-12!14;UBERON:0000158!6.14e-12!14;UBERON:0000478!4.55e-10!24;UBERON:0003124!3.91e-09!7;UBERON:0000481!6.53e-09!347;UBERON:0007023!1.05e-08!115;UBERON:0004119!3.60e-08!169;UBERON:0000925!3.60e-08!169;UBERON:0006595!3.60e-08!169;UBERON:0000119!5.36e-07!312 | |ontology_enrichment_uberon=UBERON:0005631!6.14e-12!14;UBERON:0000158!6.14e-12!14;UBERON:0000478!4.55e-10!24;UBERON:0003124!3.91e-09!7;UBERON:0000481!6.53e-09!347;UBERON:0007023!1.05e-08!115;UBERON:0004119!3.60e-08!169;UBERON:0000925!3.60e-08!169;UBERON:0006595!3.60e-08!169;UBERON:0000119!5.36e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.61e-17;24!UBERON:0005631;9.83e-15;10!UBERON:0000158;9.83e-15;10!UBERON:0001987;4.48e-10;4!UBERON:0000365;5.59e-10;5!UBERON:0000922;3.15e-09;49!UBERON:0000305;7.97e-09;7!UBERON:0005910;2.96e-08;6!UBERON:0003124;5.72e-08;3!UBERON:0000920;5.72e-08;3!UBERON:0005409;1.48e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000478;9.61e-17;24!UBERON:0005631;9.83e-15;10!UBERON:0000158;9.83e-15;10!UBERON:0001987;4.48e-10;4!UBERON:0000365;5.59e-10;5!UBERON:0000922;3.15e-09;49!UBERON:0000305;7.97e-09;7!UBERON:0005910;2.96e-08;6!UBERON:0003124;5.72e-08;3!UBERON:0000920;5.72e-08;3!UBERON:0005409;1.48e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.10e-23,14;UBERON:0000158,7.10e-23,14;UBERON:0000478,9.66e-17,24;UBERON:0003124,2.35e-16,7;UBERON:0001987,4.54e-10,4;UBERON:0004340,4.54e-10,4;UBERON:0000365,6.08e-10,5;UBERON:0000305,7.99e-09,7;UBERON:0005910,3.17e-08,6;UBERON:0000920,5.67e-08,3;UBERON:0004871,1.20e-07,8;UBERON:0001008,2.90e-07,48 | |||
|phase1_expression=0.181678379270557,0,0,0,1.34088328328186,1.74467704820074,0,0,0,0.491467873003018,0,27.0867301441414,31.388270409186,0.247532705920093,0.994192127183747,0,0,0,0,0.123121058076788,0.612002073732759,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0,1.96764655938411,5.18558332031999,0,0,0,0,0,0,0,0,0,0,0,1.23633464639278,0,0,0.168336113954066,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.929551542956147,0.621966330092223,0,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41026134156626,0,0,0,0,13.5287282397425,0,0,0,0,0.925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,3.48768055066624,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.799266537048298,0.57191197463259,37.4408907720096,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82190430954022,0.500170521059677,0.271265023699736,0.831883446123229,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,0,4.1389228517002,0,0.368738337083406,0,24.2793435253798,48.7263661811415,0,0,0,10.0032098577266,19.9722527412596,69.5497674658265,0,0,0,0,0,0,0,0,0,0,0,0,12.4485233079371,0.200506470303285,0.0920809889358963,0,0,0.393373244878272,0,0,0,0,0,0,0.170093705276516,0,4.62681758070868,0.270946437543853,1.00337954770971,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0.386682873168488,0.308097234229289,0.460511024178389,0.413509717453592,0,0.580066775656914,0.596586391912706,7.3896589586792,0.165284915360978,0.960950336825531,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0.949138274156178,1.33441135746677,0,0.855877976067841,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,2.43816869544795,0,0,1.63799893689583,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.88424136911809,0,0,0,0,0,1.04980416073495,0,0,0,4.14232723417828,3.44404298136984,1.68471475667626,3.10401107475673,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.568272293612826,59.6861211844225,33.5570089340882,46.9955874211825,0,0.140669416410513,0,0,1.26675244876796,0.796991953004279,0,0.251932747854276,0,0,0,0,0,0,0.591860433821602,0,0,0,0.371072392647405,0,0,0,3.62499787717397,0,0,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,0.658156191461918,0,0,1.23120413606075,0,4.6112780877612,0,0,75.284273696733,3.48070854927077,109.805163859839,0,0,0,0,0,0,0,0,0,0,2.40300221437699,0,0,0.0884575645033392,3.05515072466813,0,0,0,0.067401132980677,29.6953729500552,0,0,0,0,0.394584402849391,7.25944296291983,0,1.26373159256976,0,0,1.32930774541437,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.484945082442097,0,7.00540296419651,0,0,0,0.195551382734803,0,0.213452994739353,4.99524023955326,0,0,30.0291246258438,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,1.99679000498991,0,0,7.32299850105316,0,0,20.089711488342,17.2249144016638,18.8729922791718,10.1380305960191,0,0,0,0,0,0,0,0,0,0,0.157611414598396,4.56354916774483,0.105600336519406,0,0,2.85878130549347,4.63464379255802,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,88.7796155711883,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.310482014706917,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,2.40016658797892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13503190713367,0,0,1.86623178009892,0,0,0,0.54604819096007,0,0,0,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0.205116364240755,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,2.58591088751157,1.20336525358812,0,0,0,0,0,0,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,20.9337593583828,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.470958557103084,0,7.00680408284473,12.7842220871329,0,0,2.14429632529969,0.158013611732727,0,29.0343314745308,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,1.95068679971631,0.647428837187895,0.513314034281235,93.9449689383941,7.28566489588709,0,9.35068643258431,0,0,0,0,0,5.24542945209498,0,0.245148321753905,0.235676547101626,0.392616934229891,0.297046400327086,2.113278637917,0,0.0939839179798536,0.515663103788617,0,0.178553938605658,0,0,10.2247094354512,0,0.143339583151451,1.41994405973866,0,1.30905207102113,6.87734892670021,0,0,0.432626562123789,0,0,0,0,0,0,0,1.06090177505535,0.803892390468535,0,0,0.213233981900981,22.3780565575916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| ||
|short_description=p3@BC017277 | |short_description=p3@BC017277 | ||
}} | }} |
Latest revision as of 21:04, 23 July 2015
Short description: | p3@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 278bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.94e-16 | 19 |
transitional epithelial cell | 1.67e-08 | 4 |
urothelial cell | 1.67e-08 | 4 |
chorionic membrane mesenchymal stem cell | 5.67e-08 | 3 |
placental epithelial cell | 5.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.10e-23 | 14 |
membranous layer | 7.10e-23 | 14 |
extraembryonic structure | 9.66e-17 | 24 |
chorion | 2.35e-16 | 7 |
placenta | 4.54e-10 | 4 |
allantois | 4.54e-10 | 4 |
urothelium | 6.08e-10 | 5 |
amnion | 7.99e-09 | 7 |
transitional epithelium | 3.17e-08 | 6 |
egg chorion | 5.67e-08 | 3 |
somatic layer of lateral plate mesoderm | 1.20e-07 | 8 |
renal system | 2.90e-07 | 48 |