FFCP PHASE1:Hg19::chr11:33890031..33890035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:33890031..33890035,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_at_chr11:33890031..33890035,+ | |description=CAGE_peak_at_chr11:33890031..33890035,+ | ||
|id=chr11:33890031..33890035,+ | |id=chr11:33890031..33890035,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!1.70e-08!4 | |ontology_enrichment_disease=DOID:5409!1.70e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0002038!3.16e-29!1;UBERON:0009661!3.16e-29!1;UBERON:0001882!4.20e-29!1;UBERON:0005403!4.20e-29!1;UBERON:0001049!9.42e-18!57;UBERON:0005068!9.42e-18!57;UBERON:0006241!9.42e-18!57;UBERON:0007135!9.42e-18!57;UBERON:0009663!5.57e-17!7;UBERON:0002950!2.37e-15!2;UBERON:0001891!2.37e-15!2;UBERON:0009616!2.37e-15!2;UBERON:0002298!3.79e-15!8;UBERON:0002791!9.18e-14!33;UBERON:0002308!1.91e-13!9;UBERON:0002420!1.91e-13!9;UBERON:0000125!1.91e-13!9;UBERON:0007245!1.91e-13!9;UBERON:0010009!1.91e-13!9;UBERON:0010011!1.91e-13!9;UBERON:0000454!1.91e-13!9;UBERON:0002020!2.19e-13!34;UBERON:0003528!2.19e-13!34;UBERON:0001893!2.19e-13!34;UBERON:0001017!2.40e-12!82;UBERON:0002616!4.08e-12!59;UBERON:0003075!6.27e-12!86;UBERON:0007284!6.27e-12!86;UBERON:0005743!8.52e-12!86;UBERON:0002346!2.05e-11!90;UBERON:0002780!3.06e-11!41;UBERON:0001890!3.06e-11!41;UBERON:0006240!3.06e-11!41;UBERON:0003080!5.44e-11!42;UBERON:0001896!7.42e-11!3;UBERON:0005290!7.42e-11!3;UBERON:0010096!7.42e-11!3;UBERON:0002240!9.90e-11!3;UBERON:0000073!1.01e-10!94;UBERON:0001016!1.01e-10!94;UBERON:0006331!1.09e-10!3;UBERON:0000955!2.74e-10!69;UBERON:0006238!2.74e-10!69;UBERON:0003076!1.47e-08!15;UBERON:0003057!1.47e-08!15;UBERON:0001869!2.06e-08!32;UBERON:0000369!2.61e-08!4;UBERON:0002435!2.61e-08!4;UBERON:0000204!2.61e-08!4;UBERON:0010082!2.61e-08!4;UBERON:0003056!9.25e-08!61;UBERON:0000025!2.76e-07!194;UBERON:0001872!5.38e-07!5;UBERON:0002021!5.70e-07!5;UBERON:0005174!6.04e-07!5;UBERON:0001137!6.04e-07!5;UBERON:0000349!6.77e-07!5 | |ontology_enrichment_uberon=UBERON:0002038!3.16e-29!1;UBERON:0009661!3.16e-29!1;UBERON:0001882!4.20e-29!1;UBERON:0005403!4.20e-29!1;UBERON:0001049!9.42e-18!57;UBERON:0005068!9.42e-18!57;UBERON:0006241!9.42e-18!57;UBERON:0007135!9.42e-18!57;UBERON:0009663!5.57e-17!7;UBERON:0002950!2.37e-15!2;UBERON:0001891!2.37e-15!2;UBERON:0009616!2.37e-15!2;UBERON:0002298!3.79e-15!8;UBERON:0002791!9.18e-14!33;UBERON:0002308!1.91e-13!9;UBERON:0002420!1.91e-13!9;UBERON:0000125!1.91e-13!9;UBERON:0007245!1.91e-13!9;UBERON:0010009!1.91e-13!9;UBERON:0010011!1.91e-13!9;UBERON:0000454!1.91e-13!9;UBERON:0002020!2.19e-13!34;UBERON:0003528!2.19e-13!34;UBERON:0001893!2.19e-13!34;UBERON:0001017!2.40e-12!82;UBERON:0002616!4.08e-12!59;UBERON:0003075!6.27e-12!86;UBERON:0007284!6.27e-12!86;UBERON:0005743!8.52e-12!86;UBERON:0002346!2.05e-11!90;UBERON:0002780!3.06e-11!41;UBERON:0001890!3.06e-11!41;UBERON:0006240!3.06e-11!41;UBERON:0003080!5.44e-11!42;UBERON:0001896!7.42e-11!3;UBERON:0005290!7.42e-11!3;UBERON:0010096!7.42e-11!3;UBERON:0002240!9.90e-11!3;UBERON:0000073!1.01e-10!94;UBERON:0001016!1.01e-10!94;UBERON:0006331!1.09e-10!3;UBERON:0000955!2.74e-10!69;UBERON:0006238!2.74e-10!69;UBERON:0003076!1.47e-08!15;UBERON:0003057!1.47e-08!15;UBERON:0001869!2.06e-08!32;UBERON:0000369!2.61e-08!4;UBERON:0002435!2.61e-08!4;UBERON:0000204!2.61e-08!4;UBERON:0010082!2.61e-08!4;UBERON:0003056!9.25e-08!61;UBERON:0000025!2.76e-07!194;UBERON:0001872!5.38e-07!5;UBERON:0002021!5.70e-07!5;UBERON:0005174!6.04e-07!5;UBERON:0001137!6.04e-07!5;UBERON:0000349!6.77e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.96e-34;3!UBERON:0005290;5.96e-34;3!UBERON:0002298;9.07e-18;6!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.96e-34,3;UBERON:0005290,5.96e-34,3;UBERON:0010096,5.96e-34,3;UBERON:0002298,9.07e-18,6;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p@chr11:33890031..33890035,+ | |short_description=p@chr11:33890031..33890035,+ | ||
}} | }} |
Latest revision as of 21:41, 23 July 2015
Short description: | p@chr11:33890031..33890035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:33890031..33890035, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
brainstem | 9.07e-18 | 6 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |