FFCP PHASE1:Hg19::chr11:3498268..3498309,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000382076,ENST00000545935_5end | |association_with_transcript=0bp_to_ENST00000382076,ENST00000545935_5end | ||
|cluster_id=chr11:3498268..3498309,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_ENST00000382076_5end,CAGE_peak_1_at_ENST00000545935_5end | |description=CAGE_peak_1_at_ENST00000382076_5end,CAGE_peak_1_at_ENST00000545935_5end | ||
|id=chr11:3498268..3498309,- | |id=chr11:3498268..3498309,- | ||
|ontology_enrichment_celltype=CL:0002076!9.22e-25!43;CL:0000223!8.38e-17!59;CL:0002251!7.30e-14!21;CL:0000066!1.09e-13!254;CL:0002368!3.29e-10!13;CL:0000622!1.04e-07!5;CL:0002159!9.72e-07!13 | |ontology_enrichment_celltype=CL:0002076!9.22e-25!43;CL:0000223!8.38e-17!59;CL:0002251!7.30e-14!21;CL:0000066!1.09e-13!254;CL:0002368!3.29e-10!13;CL:0000622!1.04e-07!5;CL:0002159!9.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.96e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,2.71e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.64e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!1.58e-11!14;DOID:305!1.10e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.50e-08;4!DOID:1612;1.50e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.24e-08,4;DOID:1612,2.24e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.24e-23!169;UBERON:0000925!6.24e-23!169;UBERON:0006595!6.24e-23!169;UBERON:0001007!1.30e-18!155;UBERON:0001555!1.30e-18!155;UBERON:0007026!1.30e-18!155;UBERON:0001004!1.80e-16!72;UBERON:0004921!1.18e-14!129;UBERON:0004185!1.18e-14!129;UBERON:0000161!7.92e-14!35;UBERON:0000077!6.65e-13!130;UBERON:0005911!9.95e-13!82;UBERON:0000166!1.80e-11!21;UBERON:0005153!2.40e-10!37;UBERON:0001044!3.73e-10!6;UBERON:0003293!3.73e-10!6;UBERON:0003294!3.73e-10!6;UBERON:0010047!3.73e-10!6;UBERON:0000167!3.73e-10!6;UBERON:0001041!9.04e-10!98;UBERON:0000464!9.14e-10!104;UBERON:0003408!3.19e-09!10;UBERON:0005157!4.36e-09!51;UBERON:0000165!7.06e-09!28;UBERON:0000930!7.06e-09!28;UBERON:0002530!7.17e-09!59;UBERON:0000466!8.77e-09!126;UBERON:0000065!2.57e-08!53;UBERON:0005178!5.39e-08!34;UBERON:0002224!5.39e-08!34;UBERON:0005181!1.19e-07!35;UBERON:0007023!5.16e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.04e-11;3!UBERON:0004054;1.04e-11;3!UBERON:0001044;9.82e-11;6!UBERON:0003293;9.82e-11;6!UBERON:0003294;9.82e-11;6!UBERON:0010047;9.82e-11;6!UBERON:0003408;9.82e-11;6!UBERON:0000167;9.82e-11;6!UBERON:0001041;2.33e-09;14!UBERON:0001829;3.61e-09;2!UBERON:0005904;6.88e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.21e-12,3;UBERON:0004054,3.21e-12,3;UBERON:0001044,9.21e-11,6;UBERON:0003293,9.21e-11,6;UBERON:0003294,9.21e-11,6;UBERON:0010047,9.21e-11,6;UBERON:0000167,9.21e-11,6;UBERON:0005904,2.88e-09,4;UBERON:0001829,3.50e-09,2;UBERON:0005157,2.00e-08,47;UBERON:0004119,3.83e-08,160;UBERON:0000925,3.83e-08,160;UBERON:0006595,3.83e-08,160;UBERON:0005153,9.45e-08,37;UBERON:0001007,1.05e-07,145;UBERON:0001555,1.05e-07,145;UBERON:0007026,1.05e-07,145;UBERON:0004921,1.67e-07,118;UBERON:0001004,9.56e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,1.53650399572076,0,1.40740561376283,0.277765335475589,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.00253235151642,1.01289087829486,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.03041011647722,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,1.34533047155574,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,0,0.753150406214233,0.86101074534246,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,2.07875276582847,1.53580351049616,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.449341755736634,0.716084698702437,0,0.295930216910801,0,0,0,0,0,1.04171104434093,1.04951999995435,0,1.2517279311405,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0.384751292518985,0,0.23056390438806,1.25660702173681,4.0199527611143,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,3.55125962564451,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,1.30588809870604,1.92199335066233,0,0,0,0,0.872901148395775,0,0.677942222341597,0,0,0,0.195551382734803,0,1.06726497369676,0,2.73771792592801,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,3.0952078182318,0,1.0063040627978,0.945668487590378,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,2.45611048905698,1.88645166119599,1.65695622138878,0,0,0,1.27668251554036,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.235939446695481,0.917142992608395,0,0,0,0,0.225630985047772,0,5.47059807863165,0.523813388962845,0,0.295712172434091,0,0,0,0,0,8.22386650285773,0.496211178389294,0,0.255524855279191,0,0,0.606965604236632,0.455324382702595,0.177404740325278,0,0,0,0,0,0.222462803784138,1.72684804271131,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.51215543128185,1.38251932362818,11.1859113293272,0,0,1.69354820076372,0.4582137370881,0,0,0.223710863595585,0.196300467230486,3.04794812455674,0,0,0,0,0,0,0,0.22589216407792,0,0,0.540219106755613,0,0,0.245148321753905,1.17838273550813,0,0,0,0,0,0,0,0.892769693028288,1.41157948686277,2.48748236736422,1.46067277649303,5.50475140085449,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0,0.0645889098360061,0.372448285775147,0,5.15541982053136,2.22328907854041,0.653150243690884,0,1.6164492723501,1.43444410785353,0,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,2.18577172975525,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,1.53650399572076,0,1.40740561376283,0.277765335475589,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,1.00253235151642,1.01289087829486,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,1.03041011647722,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,1.34533047155574,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,0,0.753150406214233,0.86101074534246,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,2.07875276582847,1.53580351049616,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0.449341755736634,0.716084698702437,0,0.295930216910801,0,0,0,0,0,1.04171104434093,1.04951999995435,0,1.2517279311405,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.95193241990045,0.384751292518985,0,0.23056390438806,1.25660702173681,4.0199527611143,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,3.55125962564451,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,1.30588809870604,1.92199335066233,0,0,0,0,0.872901148395775,0,0.677942222341597,0,0,0,0.195551382734803,0,1.06726497369676,0,2.73771792592801,0,0,0,0,1.64985824231757,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,3.0952078182318,0,1.0063040627978,0.945668487590378,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,2.45611048905698,1.88645166119599,1.65695622138878,0,0,0,1.27668251554036,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.235939446695481,0.917142992608395,0,0,0,0,0.225630985047772,0,5.47059807863165,0.523813388962845,0,0.295712172434091,0,0,0,0,0,8.22386650285773,0.496211178389294,0,0.255524855279191,0,0,0.606965604236632,0.455324382702595,0.177404740325278,0,0,0,0,0,0.222462803784138,1.72684804271131,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.51215543128185,1.38251932362818,11.1859113293272,0,0,1.69354820076372,0.4582137370881,0,0,0.223710863595585,0.196300467230486,3.04794812455674,0,0,0,0,0,0,0,0.22589216407792,0,0,0.540219106755613,0,0,0.245148321753905,1.17838273550813,0,0,0,0,0,0,0,0.892769693028288,1.41157948686277,2.48748236736422,1.46067277649303,5.50475140085449,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,1.0661699095049,0,0.0645889098360061,0.372448285775147,0,5.15541982053136,2.22328907854041,0.653150243690884,0,1.6164492723501,1.43444410785353,0,0.162806537221949,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p1@ENST00000382076,p1@ENST00000545935 | |short_description=p1@ENST00000382076,p1@ENST00000545935 | ||
}} | }} |
Latest revision as of 21:46, 23 July 2015
Short description: | p1@ENST00000382076, p1@ENST00000545935 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000382076_5end, CAGE_peak_1_at_ENST00000545935_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000382076, ENST00000545935_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 2.71e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.21e-12 | 3 |
internal male genitalia | 3.21e-12 | 3 |
saliva-secreting gland | 9.21e-11 | 6 |
gland of oral region | 9.21e-11 | 6 |
gland of foregut | 9.21e-11 | 6 |
oral gland | 9.21e-11 | 6 |
oral cavity | 9.21e-11 | 6 |
duct of male reproductive system | 2.88e-09 | 4 |
major salivary gland | 3.50e-09 | 2 |
epithelial fold | 2.00e-08 | 47 |
endoderm-derived structure | 3.83e-08 | 160 |
endoderm | 3.83e-08 | 160 |
presumptive endoderm | 3.83e-08 | 160 |
epithelial bud | 9.45e-08 | 37 |
digestive system | 1.05e-07 | 145 |
digestive tract | 1.05e-07 | 145 |
primitive gut | 1.05e-07 | 145 |
subdivision of digestive tract | 1.67e-07 | 118 |
respiratory system | 9.56e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.24e-08 | 4 |
breast cancer | 2.24e-08 | 4 |