FFCP PHASE1:Hg19::chr11:46295968..46295985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENST00000527239_5end | |association_with_transcript=112bp_to_ENST00000527239_5end | ||
|cluster_id=chr11:46295968..46295985,- | |||
|coexpression_cluster_id=C155 | |coexpression_cluster_id=C155 | ||
|description=CAGE_peak_1_at_ENST00000527239_5end | |description=CAGE_peak_1_at_ENST00000527239_5end | ||
|id=chr11:46295968..46295985,- | |id=chr11:46295968..46295985,- | ||
|ontology_enrichment_celltype=CL:0000359!3.85e-15!32;CL:0000192!4.53e-15!42;CL:0000514!4.53e-15!42;CL:0000187!8.67e-12!54;CL:0000183!4.90e-11!59;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000393!8.99e-10!60;CL:0000211!8.99e-10!60 | |ontology_enrichment_celltype=CL:0000359!3.85e-15!32;CL:0000192!4.53e-15!42;CL:0000514!4.53e-15!42;CL:0000187!8.67e-12!54;CL:0000183!4.90e-11!59;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000393!8.99e-10!60;CL:0000211!8.99e-10!60 | ||
|ontology_enrichment_celltype_v019=CL:0002195;1.31e-10;2!CL:0002571;1.31e-10;2!CL:0002593;1.95e-10;2!CL:0000359;1.09e-07;32!CL:0000632;6.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.44e-10,2;CL:0002571,1.44e-10,2;CL:0002593,1.51e-10,2;CL:0000359,6.63e-08,32;CL:0000192,4.21e-07,43;CL:0000514,4.21e-07,43;CL:0000632,4.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.20e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.86e-07;3!DOID:127;1.86e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.90e-07,3;DOID:127,1.90e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004872!8.60e-16!84;UBERON:0003914!3.07e-15!118;UBERON:0004111!6.47e-15!241;UBERON:0001009!4.36e-12!113;UBERON:0005256!4.79e-12!143;UBERON:0001637!6.61e-12!42;UBERON:0003509!6.61e-12!42;UBERON:0004572!6.61e-12!42;UBERON:0000025!2.08e-11!194;UBERON:0000477!4.40e-11!286;UBERON:0001981!9.88e-11!60;UBERON:0007500!9.88e-11!60;UBERON:0004537!9.88e-11!60;UBERON:0006965!9.88e-11!60;UBERON:0002385!1.04e-10!63;UBERON:0001015!1.04e-10!63;UBERON:0000383!1.04e-10!63;UBERON:0004535!1.52e-10!110;UBERON:0004573!7.81e-10!33;UBERON:0004571!7.81e-10!33;UBERON:0007023!8.24e-10!115;UBERON:0007100!1.44e-09!27;UBERON:0001134!1.77e-09!61;UBERON:0002036!1.77e-09!61;UBERON:0003082!1.77e-09!61;UBERON:0000481!1.93e-09!347;UBERON:0003104!9.26e-09!238;UBERON:0009142!9.26e-09!238;UBERON:0005156!1.62e-08!59;UBERON:0000990!1.62e-08!59;UBERON:0004122!2.33e-08!15;UBERON:0000055!3.01e-08!69;UBERON:0000490!1.15e-07!138;UBERON:0002049!1.17e-07!79;UBERON:0007798!1.17e-07!79;UBERON:0002100!1.52e-07!216;UBERON:0000483!1.85e-07!309;UBERON:0001135!2.07e-07!15;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0000162!2.55e-07!14;UBERON:0001353!2.55e-07!14;UBERON:0000163!2.55e-07!14;UBERON:0006866!2.55e-07!14;UBERON:0000164!2.55e-07!14;UBERON:0000931!2.55e-07!14;UBERON:0004290!2.90e-07!70;UBERON:0003101!3.27e-07!22;UBERON:0000079!3.27e-07!22;UBERON:0000119!3.35e-07!312;UBERON:0003937!3.76e-07!12;UBERON:0005399!3.76e-07!12;UBERON:0005904!5.82e-07!4;UBERON:0000926!5.85e-07!448;UBERON:0004120!5.85e-07!448;UBERON:0006603!5.85e-07!448 | |ontology_enrichment_uberon=UBERON:0004872!8.60e-16!84;UBERON:0003914!3.07e-15!118;UBERON:0004111!6.47e-15!241;UBERON:0001009!4.36e-12!113;UBERON:0005256!4.79e-12!143;UBERON:0001637!6.61e-12!42;UBERON:0003509!6.61e-12!42;UBERON:0004572!6.61e-12!42;UBERON:0000025!2.08e-11!194;UBERON:0000477!4.40e-11!286;UBERON:0001981!9.88e-11!60;UBERON:0007500!9.88e-11!60;UBERON:0004537!9.88e-11!60;UBERON:0006965!9.88e-11!60;UBERON:0002385!1.04e-10!63;UBERON:0001015!1.04e-10!63;UBERON:0000383!1.04e-10!63;UBERON:0004535!1.52e-10!110;UBERON:0004573!7.81e-10!33;UBERON:0004571!7.81e-10!33;UBERON:0007023!8.24e-10!115;UBERON:0007100!1.44e-09!27;UBERON:0001134!1.77e-09!61;UBERON:0002036!1.77e-09!61;UBERON:0003082!1.77e-09!61;UBERON:0000481!1.93e-09!347;UBERON:0003104!9.26e-09!238;UBERON:0009142!9.26e-09!238;UBERON:0005156!1.62e-08!59;UBERON:0000990!1.62e-08!59;UBERON:0004122!2.33e-08!15;UBERON:0000055!3.01e-08!69;UBERON:0000490!1.15e-07!138;UBERON:0002049!1.17e-07!79;UBERON:0007798!1.17e-07!79;UBERON:0002100!1.52e-07!216;UBERON:0000483!1.85e-07!309;UBERON:0001135!2.07e-07!15;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0000162!2.55e-07!14;UBERON:0001353!2.55e-07!14;UBERON:0000163!2.55e-07!14;UBERON:0006866!2.55e-07!14;UBERON:0000164!2.55e-07!14;UBERON:0000931!2.55e-07!14;UBERON:0004290!2.90e-07!70;UBERON:0003101!3.27e-07!22;UBERON:0000079!3.27e-07!22;UBERON:0000119!3.35e-07!312;UBERON:0003937!3.76e-07!12;UBERON:0005399!3.76e-07!12;UBERON:0005904!5.82e-07!4;UBERON:0000926!5.85e-07!448;UBERON:0004120!5.85e-07!448;UBERON:0006603!5.85e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;4.11e-19;4!UBERON:0006947;4.96e-15;3!UBERON:0004054;4.96e-15;3!UBERON:0003296;8.61e-12;4!UBERON:0010133;8.61e-12;4!UBERON:0000007;3.93e-11;2!UBERON:0002456;1.95e-10;2!UBERON:0002368;5.19e-08;33!UBERON:0000058;1.08e-07;10!UBERON:0004175;1.37e-07;21!UBERON:0003101;4.36e-07;22!UBERON:0000079;4.36e-07;22!UBERON:0003135;5.36e-07;11!UBERON:0001894;6.66e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,2.36e-19,4;UBERON:0006947,2.83e-15,3;UBERON:0004054,2.83e-15,3;UBERON:0003296,8.96e-12,4;UBERON:0010133,8.96e-12,4;UBERON:0000007,3.94e-11,2;UBERON:0002456,1.51e-10,2;UBERON:0005256,2.06e-10,122;UBERON:0003104,6.98e-10,160;UBERON:0009142,6.98e-10,160;UBERON:0003914,1.81e-08,117;UBERON:0004111,7.89e-08,240;UBERON:0002530,1.78e-07,59;UBERON:0002368,2.10e-07,35;UBERON:0003101,3.99e-07,22;UBERON:0000079,3.99e-07,22;UBERON:0003135,4.43e-07,11;UBERON:0000949,5.74e-07,45;UBERON:0001894,6.81e-07,7;UBERON:0006222,6.81e-07,7 | |||
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|short_description=p1@ENST00000527239 | |short_description=p1@ENST00000527239 | ||
}} | }} |
Latest revision as of 22:23, 23 July 2015
Short description: | p1@ENST00000527239 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000527239_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 112bp_to_ENST00000527239_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.44e-10 | 2 |
hepatic mesenchymal stem cell | 1.44e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.51e-10 | 2 |
vascular associated smooth muscle cell | 6.63e-08 | 32 |
smooth muscle cell | 4.21e-07 | 43 |
smooth muscle myoblast | 4.21e-07 | 43 |
hepatic stellate cell | 4.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 2.36e-19 | 4 |
male genital duct | 2.83e-15 | 3 |
internal male genitalia | 2.83e-15 | 3 |
gland of diencephalon | 8.96e-12 | 4 |
neuroendocrine gland | 8.96e-12 | 4 |
pituitary gland | 3.94e-11 | 2 |
internal thoracic artery | 1.51e-10 | 2 |
trunk mesenchyme | 2.06e-10 | 122 |
mesenchyme | 6.98e-10 | 160 |
entire embryonic mesenchyme | 6.98e-10 | 160 |
epithelial tube | 1.81e-08 | 117 |
anatomical conduit | 7.89e-08 | 240 |
gland | 1.78e-07 | 59 |
endocrine gland | 2.10e-07 | 35 |
male organism | 3.99e-07 | 22 |
male reproductive system | 3.99e-07 | 22 |
male reproductive organ | 4.43e-07 | 11 |
endocrine system | 5.74e-07 | 45 |
diencephalon | 6.81e-07 | 7 |
future diencephalon | 6.81e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.90e-07 | 3 |
leiomyoma | 1.90e-07 | 3 |