FFCP PHASE1:Hg19::chr11:46295968..46295985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=112bp_to_ENST00000527239_5end | |association_with_transcript=112bp_to_ENST00000527239_5end | ||
|cluster_id=chr11:46295968..46295985,- | |||
|coexpression_cluster_id=C155 | |coexpression_cluster_id=C155 | ||
|description=CAGE_peak_1_at_ENST00000527239_5end | |description=CAGE_peak_1_at_ENST00000527239_5end | ||
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|ontology_enrichment_celltype=CL:0000359!3.85e-15!32;CL:0000192!4.53e-15!42;CL:0000514!4.53e-15!42;CL:0000187!8.67e-12!54;CL:0000183!4.90e-11!59;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000393!8.99e-10!60;CL:0000211!8.99e-10!60 | |ontology_enrichment_celltype=CL:0000359!3.85e-15!32;CL:0000192!4.53e-15!42;CL:0000514!4.53e-15!42;CL:0000187!8.67e-12!54;CL:0000183!4.90e-11!59;CL:0000680!1.01e-10!57;CL:0000056!1.01e-10!57;CL:0000355!1.01e-10!57;CL:0000393!8.99e-10!60;CL:0000211!8.99e-10!60 | ||
|ontology_enrichment_celltype_v019=CL:0002195;1.31e-10;2!CL:0002571;1.31e-10;2!CL:0002593;1.95e-10;2!CL:0000359;1.09e-07;32!CL:0000632;6.91e-07;3 | |ontology_enrichment_celltype_v019=CL:0002195;1.31e-10;2!CL:0002571;1.31e-10;2!CL:0002593;1.95e-10;2!CL:0000359;1.09e-07;32!CL:0000632;6.91e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.44e-10,2;CL:0002571,1.44e-10,2;CL:0002593,1.51e-10,2;CL:0000359,6.63e-08,32;CL:0000192,4.21e-07,43;CL:0000514,4.21e-07,43;CL:0000632,4.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.20e-10;2 | |ontology_enrichment_development_v019=UBERON:0007297;2.20e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.86e-07;3!DOID:127;1.86e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;1.86e-07;3!DOID:127;1.86e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.90e-07,3;DOID:127,1.90e-07,3 | |||
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|short_description=p1@ENST00000527239 | |short_description=p1@ENST00000527239 | ||
}} | }} |
Latest revision as of 22:23, 23 July 2015
Short description: | p1@ENST00000527239 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000527239_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 112bp_to_ENST00000527239_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.44e-10 | 2 |
hepatic mesenchymal stem cell | 1.44e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.51e-10 | 2 |
vascular associated smooth muscle cell | 6.63e-08 | 32 |
smooth muscle cell | 4.21e-07 | 43 |
smooth muscle myoblast | 4.21e-07 | 43 |
hepatic stellate cell | 4.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 2.36e-19 | 4 |
male genital duct | 2.83e-15 | 3 |
internal male genitalia | 2.83e-15 | 3 |
gland of diencephalon | 8.96e-12 | 4 |
neuroendocrine gland | 8.96e-12 | 4 |
pituitary gland | 3.94e-11 | 2 |
internal thoracic artery | 1.51e-10 | 2 |
trunk mesenchyme | 2.06e-10 | 122 |
mesenchyme | 6.98e-10 | 160 |
entire embryonic mesenchyme | 6.98e-10 | 160 |
epithelial tube | 1.81e-08 | 117 |
anatomical conduit | 7.89e-08 | 240 |
gland | 1.78e-07 | 59 |
endocrine gland | 2.10e-07 | 35 |
male organism | 3.99e-07 | 22 |
male reproductive system | 3.99e-07 | 22 |
male reproductive organ | 4.43e-07 | 11 |
endocrine system | 5.74e-07 | 45 |
diencephalon | 6.81e-07 | 7 |
future diencephalon | 6.81e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.90e-07 | 3 |
leiomyoma | 1.90e-07 | 3 |