FFCP PHASE1:Hg19::chr11:46404270..46404303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:46404270..46404303,- | |||
|coexpression_cluster_id=C2134 | |||
|description=CAGE_peak_at_chr11:46404270..46404303,- | |description=CAGE_peak_at_chr11:46404270..46404303,- | ||
|id=chr11:46404270..46404303,- | |id=chr11:46404270..46404303,- | ||
|ontology_enrichment_celltype=CL:0000066!2.85e-15!254;CL:0002321!1.20e-10!248;CL:0000220!4.54e-10!246 | |ontology_enrichment_celltype=CL:0000066!2.85e-15!254;CL:0002321!1.20e-10!248;CL:0000220!4.54e-10!246 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.46e-10;7!CL:0000126;2.46e-10;7!CL:0000127;2.46e-10;7!CL:0002319;4.10e-09;25!CL:0002322;6.65e-08;5!CL:0000095;1.44e-07;17!CL:0000243;2.68e-07;15!CL:0000125;2.68e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.79e-11,253;CL:0000128,1.21e-10,7;CL:0000126,1.21e-10,7;CL:0000127,1.21e-10,7;CL:0002453,1.21e-10,7;CL:0000133,1.36e-09,59;CL:0002319,2.83e-09,25;CL:0002321,1.02e-08,250;CL:0000333,8.74e-08,41;CL:0002322,1.01e-07,5;CL:0000095,1.02e-07,17;CL:0000123,1.02e-07,17;CL:0000243,1.36e-07,15;CL:0000125,1.36e-07,15;CL:0000030,1.36e-07,15;CL:0000339,1.36e-07,15;CL:0000221,1.60e-07,72;CL:1000497,3.14e-07,17;CL:0002518,3.14e-07,17;CL:1000449,7.83e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;2.68e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!9.11e-13!143;DOID:305!4.23e-09!106 | |ontology_enrichment_disease=DOID:0050687!9.11e-13!143;DOID:305!4.23e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;4.36e-07;22!DOID:2994;4.36e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.02e-09,143;DOID:3095,3.86e-07,22;DOID:2994,3.86e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.51e-07!44;UBERON:0000119!2.07e-07!312;UBERON:0000483!2.96e-07!309;UBERON:0001008!4.02e-07!45;UBERON:0005256!4.35e-07!143;UBERON:0000490!8.21e-07!138 | |ontology_enrichment_uberon=UBERON:0006554!1.51e-07!44;UBERON:0000119!2.07e-07!312;UBERON:0000483!2.96e-07!309;UBERON:0001008!4.02e-07!45;UBERON:0005256!4.35e-07!143;UBERON:0000490!8.21e-07!138 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.83e-07,15;UBERON:0009773,7.83e-07,15;UBERON:0001231,7.83e-07,15;UBERON:0001285,7.83e-07,15;UBERON:0007684,7.83e-07,15;UBERON:0004208,7.83e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,2.09340350391728,1.09220686065086,1.58260186937072,0.866364470720326,0.331397375727916,0,0,1.46062018077475,0.487932798790507,1.23121058076788,2.04000691244253,1.88072832886853,3.14859585844162,3.83248390204076,2.76193807108566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,0.722878304769133,1.00267582127178,0.289693037921647,0,0.486634870302636,2.9305793320861,1.10864698731282,4.21606971327005,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,1.67799774483962,0.825354125820202,0.626984899610432,0.775250277507987,0.71153252537342,0.33472061276467,1.61131726843659,0,5.12530320851156,0,1.62028389576352,0.446498641420399,0.44905874525234,0.900891843866578,0,0,1.46561395144326,0,0,0.872188104285069,0,0.379891534993739,0,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0.404132016209064,0,0,0,0.937285727335186,0.312160076830321,0,0.149448680551801,0,0.485618833104395,0.280901613404497,0,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0,0.505008341862199,0.125118519871964,0,0.877955241761676,0,1.05166641234618,0.567160915800105,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.558350568994769,0.675105328965065,0.0974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,0,0.503760491138201,0.339121184620975,0.386521706326594,0,0,2.07355300420312,1.06023814657188,2.20768491452085,1.65857688024593,4.28945446488568,0.72995471815166,0,0,0,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,1.47008711385542,0,0,0,0,0.245976877086227,0.343135620597051,0,0,0.100528972411631,0,1.62904152655162,0,1.44331342025273,3.13012093432707,0.821860859650752,1.01056513432752,1.85194205030644,0.570762456703795,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.387815147273333,3.57656445851882,0,0.797814349754612,0,1.28603687131071,1.41849132023278,0.532844358032199,0.857867961948885,2.71310802695722,0,0.325736184293735,0.710783897485092,1.58390374586686,0.602878754119172,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,1.47229790062968,1.00034104211935,0.271265023699736,0.207970861530807,0.356857977594324,0,0.117141414992713,0,0,0,0.664225598535437,0.921845842708516,0.434418072340414,1.17480694477644,0.343143423810856,0,0,0,0.303127571446259,0,6.35019615992329,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.581051892299796,0.725156697549733,0.601519410909855,0.552485933615378,0.229628896329213,0.910455840033585,1.18011973463482,1.80479845162965,0.308061348417659,3.92174884588428,1.46139224653261,0.73886140225013,0,0.510281115829547,1.72732732881711,1.54227252690289,1.89662506280697,5.51858751240339,0,0,1.56712328305525,0,0,3.59030175162945,1.31205858279882,0.650756789328606,0.103041011647722,0.54941678891006,0.165018999841176,0,0,0,0.96670718292122,0.770243085573222,1.22802939780904,0,0.322260734604821,1.59518363305651,0.596586391912706,0.979352392114111,0,0.192190067365106,0,0.50578890427775,0,0.62962469366128,0,0.924100740528266,0,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,1.535386747868,1.28381696410176,0,0.78494864019923,0.539617372749944,2.19629623788844,2.35624804691373,0,1.58510321173008,0,2.43816869544795,1.46228093778771,0,0,0.707027159768564,0,0,0.66343897524122,0,0,0.655894752046633,0,0.6196469961995,0.563391205064483,1.00387946542836,1.96498082026242,0,0.354761064070598,0.211107635297664,0.987884678879706,0.75894634753143,1.39973888097993,0.0962221127255121,0,0,0,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,2.24330549367694,0,2.45040215981032,0.371606350251437,0.28853842595289,0.0711418433484141,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,2.05854594449042,0,0,0,0,0,0.593929361665277,0,0,0,0.222617410045812,0,0.844501632511974,0.398495976502139,0,0.755798243562828,1.73856760253663,0,0,0.0898683511473268,1.07412704805365,0.511572370226872,0.295930216910801,0,1.11136990144637,0,0.0927680981618513,1.99613798001194,0,0,0,6.60002000055898,0.762760950878299,0.472775363535873,0.344743373241465,0,0.868124974666461,0,0.120596438625408,0,0,0.886642856860642,0,0,0.278847488557207,0.846452843541768,0.113942055847001,0.69169171316418,0,1.4124158349861,0,0.549585560411174,0.533034776018635,0,0.627921025580099,0,0,0.784250137270958,0.839107934879214,0,0,0,0.163232808159148,0.848118428603645,0,0,0.442287822516696,0,0,0,0.208843899010911,0,0,0,0,0.782658475728359,0,0,0,0,0.12637315925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| ||
|short_description=p@chr11:46404270..46404303,- | |short_description=p@chr11:46404270..46404303,- | ||
}} | }} |
Latest revision as of 22:28, 23 July 2015
Short description: | p@chr11:46404270..46404303, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:46404270..46404303, - |
Coexpression cluster: | C2134_normal_liposarcoma_bronchial_small_Placental_endometrial_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.79e-11 | 253 |
oligodendrocyte | 1.21e-10 | 7 |
macroglial cell | 1.21e-10 | 7 |
astrocyte | 1.21e-10 | 7 |
oligodendrocyte precursor cell | 1.21e-10 | 7 |
neurectodermal cell | 1.36e-09 | 59 |
neural cell | 2.83e-09 | 25 |
embryonic cell | 1.02e-08 | 250 |
migratory neural crest cell | 8.74e-08 | 41 |
embryonic stem cell | 1.01e-07 | 5 |
neuron associated cell | 1.02e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.02e-07 | 17 |
glial cell (sensu Vertebrata) | 1.36e-07 | 15 |
glial cell | 1.36e-07 | 15 |
glioblast | 1.36e-07 | 15 |
glioblast (sensu Vertebrata) | 1.36e-07 | 15 |
ectodermal cell | 1.60e-07 | 72 |
kidney cell | 3.14e-07 | 17 |
kidney epithelial cell | 3.14e-07 | 17 |
epithelial cell of nephron | 7.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.83e-07 | 15 |
renal tubule | 7.83e-07 | 15 |
nephron tubule | 7.83e-07 | 15 |
nephron | 7.83e-07 | 15 |
uriniferous tubule | 7.83e-07 | 15 |
nephrogenic mesenchyme | 7.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.02e-09 | 143 |
germ cell and embryonal cancer | 3.86e-07 | 22 |
germ cell cancer | 3.86e-07 | 22 |